RNA–Protein interactions for RNA: ENST00000344523.8

NR6A1-201, Transcript of nuclear receptor subfamily 6 group A member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NR6A1, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR6A1-201ENST00000344523 TNRC6CQ9HCJ0 1690 aaKnown RBP29.26■■■□□ 2.27
NR6A1-201ENST00000344523 ATP8B2P98198 1209 aa29.26■■■□□ 2.27
NR6A1-201ENST00000344523 SF3B3Q15393 1217 aaKnown RBP29.26■■■□□ 2.27
NR6A1-201ENST00000344523 CHRNA5P30532 468 aa29.25■■■□□ 2.27
NR6A1-201ENST00000344523 PDE6BP35913 854 aa29.25■■■□□ 2.27
NR6A1-201ENST00000344523 CCDC152Q4G0S7 254 aa29.25■■■□□ 2.27
NR6A1-201ENST00000344523 KLHDC4Q8TBB5 520 aa29.24■■■□□ 2.27
NR6A1-201ENST00000344523 C10orf71Q711Q0 1435 aa29.24■■■□□ 2.27
NR6A1-201ENST00000344523 AAMPQ13685 434 aa29.24■■■□□ 2.27
NR6A1-201ENST00000344523 KLRG2A4D1S0 409 aaPredicted RBP29.23■■■□□ 2.27
NR6A1-201ENST00000344523 ITGA6P23229 1130 aa29.23■■■□□ 2.27
NR6A1-201ENST00000344523 C2CD5Q86YS7 1000 aa29.23■■■□□ 2.27
NR6A1-201ENST00000344523 RPAP2Q8IXW5 612 aaPredicted RBP29.23■■■□□ 2.27
NR6A1-201ENST00000344523 ZNF594Q96JF6 807 aaPredicted RBP29.23■■■□□ 2.27
NR6A1-201ENST00000344523 MTX1Q13505 466 aa29.22■■■□□ 2.27
NR6A1-201ENST00000344523 CRY2Q49AN0 593 aa29.22■■■□□ 2.27
NR6A1-201ENST00000344523 RPGRQ92834 1020 aaKnown RBP29.22■■■□□ 2.27
NR6A1-201ENST00000344523 ANKRD31Q8N7Z5 1873 aa29.21■■■□□ 2.27
NR6A1-201ENST00000344523 RIC1Q4ADV7 1423 aa29.21■■■□□ 2.27
NR6A1-201ENST00000344523 A0A0G2JLW4 131 aa29.21■■■□□ 2.27
NR6A1-201ENST00000344523 IFIT5Q13325 482 aaKnown RBP29.21■■■□□ 2.27
NR6A1-201ENST00000344523 CCDC57Q2TAC2 916 aa29.21■■■□□ 2.27
NR6A1-201ENST00000344523 PA2G4Q9UQ80 394 aaKnown RBP29.21■■■□□ 2.27
NR6A1-201ENST00000344523 SRGNP10124 158 aa29.2■■■□□ 2.27
NR6A1-201ENST00000344523 H0YIN7 160 aa29.2■■■□□ 2.26
NR6A1-201ENST00000344523 DDX46Q7L014 1031 aaKnown RBP29.2■■■□□ 2.26
NR6A1-201ENST00000344523 ZNF622Q969S3 477 aaKnown RBP eCLIP29.2■■■□□ 2.265e-8■■■■■ 31.3
NR6A1-201ENST00000344523 ANKRD18BA2A2Z9 1011 aa29.19■■■□□ 2.26
NR6A1-201ENST00000344523 RFX5P48382 616 aaPredicted RBP29.19■■■□□ 2.26
NR6A1-201ENST00000344523 SSH3Q8TE77 659 aa29.19■■■□□ 2.26
NR6A1-201ENST00000344523 LAMB2P55268 1798 aa29.19■■■□□ 2.26
NR6A1-201ENST00000344523 DPEP1P16444 411 aa29.18■■■□□ 2.26
NR6A1-201ENST00000344523 POLA2Q14181 598 aa29.18■■■□□ 2.26
NR6A1-201ENST00000344523 CELF1Q92879 486 aaKnown RBP29.18■■■□□ 2.26
NR6A1-201ENST00000344523 SIL1Q9H173 461 aa29.17■■■□□ 2.26
NR6A1-201ENST00000344523 WWC3Q9ULE0 1092 aa29.17■■■□□ 2.26
NR6A1-201ENST00000344523 GTF3C3Q9Y5Q9 886 aa29.17■■■□□ 2.26
NR6A1-201ENST00000344523 IGHDP01880 384 aa29.17■■■□□ 2.26
NR6A1-201ENST00000344523 TAF7LQ5H9L4 462 aa29.17■■■□□ 2.26
NR6A1-201ENST00000344523 RBM17Q96I25 401 aaKnown RBP29.17■■■□□ 2.26
NR6A1-201ENST00000344523 PTPN12Q05209 780 aaKnown RBP29.16■■■□□ 2.26
NR6A1-201ENST00000344523 CD2APQ9Y5K6 639 aa29.16■■■□□ 2.26
NR6A1-201ENST00000344523 MYH3P11055 1940 aa29.16■■■□□ 2.26
NR6A1-201ENST00000344523 GOLGB1Q14789 3259 aaKnown RBP29.15■■■□□ 2.26
NR6A1-201ENST00000344523 HMMRO75330 724 aa29.15■■■□□ 2.26
NR6A1-201ENST00000344523 NPR1P16066 1061 aa29.15■■■□□ 2.26
NR6A1-201ENST00000344523 MASTLQ96GX5 879 aa29.15■■■□□ 2.26
NR6A1-201ENST00000344523 FHDC1Q9C0D6 1143 aaPredicted RBP29.15■■■□□ 2.26
NR6A1-201ENST00000344523 COL4A1P02462 1669 aa29.15■■■□□ 2.26
NR6A1-201ENST00000344523 HOXA10P31260 410 aaPredicted RBP29.15■■■□□ 2.26
NR6A1-201ENST00000344523 SLC51AQ86UW1 340 aa29.15■■■□□ 2.26
NR6A1-201ENST00000344523 NLGN2Q8NFZ4 835 aa29.15■■■□□ 2.26
NR6A1-201ENST00000344523 PUS3Q9BZE2 481 aaKnown RBP29.14■■■□□ 2.26
NR6A1-201ENST00000344523 RTL9Q8NET4 1388 aa29.14■■■□□ 2.26
NR6A1-201ENST00000344523 KCNA3P22001 575 aa29.13■■■□□ 2.25
NR6A1-201ENST00000344523 ERICH6BQ5W0A0 696 aa29.13■■■□□ 2.25
NR6A1-201ENST00000344523 TGFB2P61812 414 aa29.13■■■□□ 2.25
NR6A1-201ENST00000344523 RPS8P62241 208 aaKnown RBP29.13■■■□□ 2.25
NR6A1-201ENST00000344523 B4GALNT3Q6L9W6 998 aa29.13■■■□□ 2.25
NR6A1-201ENST00000344523 ANKRD18AQ8IVF6 992 aa29.13■■■□□ 2.25
NR6A1-201ENST00000344523 CDC5LQ99459 802 aaKnown RBP29.13■■■□□ 2.25
NR6A1-201ENST00000344523 EXOC6BQ9Y2D4 811 aa29.13■■■□□ 2.25
NR6A1-201ENST00000344523 TAF1P21675 1872 aa29.12■■■□□ 2.25
NR6A1-201ENST00000344523 SURF6O75683 361 aaKnown RBP29.12■■■□□ 2.25
NR6A1-201ENST00000344523 GRAPQ13588 217 aa29.12■■■□□ 2.25
NR6A1-201ENST00000344523 LRRC24Q50LG9 513 aa29.12■■■□□ 2.25
NR6A1-201ENST00000344523 GRAPLQ8TC17 118 aaPredicted RBP29.12■■■□□ 2.25
NR6A1-201ENST00000344523 CRAMP1Q96RY5 1269 aa29.11■■■□□ 2.25
NR6A1-201ENST00000344523 RWDD1Q9H446 243 aaPredicted RBP29.11■■■□□ 2.25
NR6A1-201ENST00000344523 COL11A2P13942 1736 aaPredicted RBP29.11■■■□□ 2.25
NR6A1-201ENST00000344523 APBB1O00213 710 aa29.1■■■□□ 2.25
NR6A1-201ENST00000344523 HDAC1Q13547 482 aaPredicted RBP29.1■■■□□ 2.25
NR6A1-201ENST00000344523 LDHAL6AQ6ZMR3 332 aa29.1■■■□□ 2.25
NR6A1-201ENST00000344523 CCDC136Q96JN2 1154 aa29.1■■■□□ 2.25
NR6A1-201ENST00000344523 COPRSQ9NQ92 184 aa29.1■■■□□ 2.25
NR6A1-201ENST00000344523 PPP4R2Q9NY27 417 aa29.1■■■□□ 2.25
NR6A1-201ENST00000344523 IGHMBP2P38935 993 aaKnown RBP29.1■■■□□ 2.25
NR6A1-201ENST00000344523 STYK1Q6J9G0 422 aa29.1■■■□□ 2.25
NR6A1-201ENST00000344523 MPHOSPH8Q99549 860 aa29.1■■■□□ 2.25
NR6A1-201ENST00000344523 PDZRN3Q9UPQ7 1066 aa29.1■■■□□ 2.25
NR6A1-201ENST00000344523 ALDH1B1P30837 517 aa29.08■■■□□ 2.25
NR6A1-201ENST00000344523 BCL11AQ9H165 835 aa29.08■■■□□ 2.25
NR6A1-201ENST00000344523 CNNM1Q9NRU3 951 aa29.08■■■□□ 2.25
NR6A1-201ENST00000344523 ZNF219Q9P2Y4 722 aaPredicted RBP29.08■■■□□ 2.25
NR6A1-201ENST00000344523 KIF13BQ9NQT8 1826 aa29.07■■■□□ 2.24
NR6A1-201ENST00000344523 SYT17Q9BSW7 474 aa29.07■■■□□ 2.24
NR6A1-201ENST00000344523 G3BP1Q13283 466 aaKnown RBP eCLIP29.06■■■□□ 2.24
NR6A1-201ENST00000344523 OS9Q13438 667 aaPredicted RBP29.06■■■□□ 2.24
NR6A1-201ENST00000344523 PRPF40BQ6NWY9 871 aaKnown RBP29.06■■■□□ 2.24
NR6A1-201ENST00000344523 OLFM4Q6UX06 510 aa29.06■■■□□ 2.24
NR6A1-201ENST00000344523 DCTPP1Q9H773 170 aa29.06■■■□□ 2.24
NR6A1-201ENST00000344523 EYA2O00167 538 aa29.06■■■□□ 2.24
NR6A1-201ENST00000344523 ATG9AQ7Z3C6 839 aa29.06■■■□□ 2.24
NR6A1-201ENST00000344523 CNKSR1Q969H4 720 aa29.06■■■□□ 2.24
NR6A1-201ENST00000344523 BSDC1Q9NW68 430 aaPredicted RBP29.06■■■□□ 2.24
NR6A1-201ENST00000344523 BBOX1O75936 387 aa29.05■■■□□ 2.24
NR6A1-201ENST00000344523 TTLL6Q8N841 843 aa29.05■■■□□ 2.24
NR6A1-201ENST00000344523 PIM2Q9P1W9 311 aa29.05■■■□□ 2.24
NR6A1-201ENST00000344523 NOP58Q9Y2X3 529 aaKnown RBP29.05■■■□□ 2.24
NR6A1-201ENST00000344523 PPEF1O14829 653 aaPredicted RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms