RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.42■□□□□ 0.38
CLCN1-201ENST00000343257 POLA2Q14181 598 aa17.42■□□□□ 0.38
CLCN1-201ENST00000343257 FSD1Q9BTV5 496 aa17.42■□□□□ 0.38
CLCN1-201ENST00000343257 TM6SF1Q9BZW5 370 aa17.42■□□□□ 0.38
CLCN1-201ENST00000343257 CHGBP05060 677 aa17.41■□□□□ 0.38
CLCN1-201ENST00000343257 CDC25BP30305 580 aa17.41■□□□□ 0.38
CLCN1-201ENST00000343257 KRBA2Q6ZNG9 492 aa17.41■□□□□ 0.38
CLCN1-201ENST00000343257 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.41■□□□□ 0.38
CLCN1-201ENST00000343257 IFNKQ9P0W0 207 aa17.41■□□□□ 0.38
CLCN1-201ENST00000343257 NEMFO60524 1076 aa17.41■□□□□ 0.38
CLCN1-201ENST00000343257 KINO60870 393 aaKnown RBP17.41■□□□□ 0.38
CLCN1-201ENST00000343257 URI1O94763 535 aaPredicted RBP17.41■□□□□ 0.38
CLCN1-201ENST00000343257 PSMA5P28066 241 aa17.41■□□□□ 0.38
CLCN1-201ENST00000343257 TMCO3Q6UWJ1 677 aa17.41■□□□□ 0.38
CLCN1-201ENST00000343257 CCDC73Q6ZRK6 1079 aa17.41■□□□□ 0.38
CLCN1-201ENST00000343257 UBXN4Q92575 508 aa17.41■□□□□ 0.38
CLCN1-201ENST00000343257 FEZ2Q9UHY8 353 aaPredicted RBP17.41■□□□□ 0.38
CLCN1-201ENST00000343257 FRMPD1Q5SYB0 1578 aa17.41■□□□□ 0.38
CLCN1-201ENST00000343257 H2AFXP16104 143 aaPredicted RBP17.4■□□□□ 0.38
CLCN1-201ENST00000343257 ME1P48163 572 aa17.4■□□□□ 0.38
CLCN1-201ENST00000343257 GNL2Q13823 731 aaKnown RBP17.4■□□□□ 0.38
CLCN1-201ENST00000343257 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLCN1-201ENST00000343257 RPS6KB1P23443 525 aa17.4■□□□□ 0.38
CLCN1-201ENST00000343257 RESTQ13127 1097 aa17.4■□□□□ 0.38
CLCN1-201ENST00000343257 NUTM2GQ5VZR2 741 aa17.4■□□□□ 0.38
CLCN1-201ENST00000343257 MNS1Q8NEH6 495 aa17.4■□□□□ 0.38
CLCN1-201ENST00000343257 SDF4Q9BRK5 362 aa17.4■□□□□ 0.38
CLCN1-201ENST00000343257 AMPHP49418 695 aa17.4■□□□□ 0.38
CLCN1-201ENST00000343257 ZNF589Q86UQ0 364 aaPredicted RBP17.4■□□□□ 0.38
CLCN1-201ENST00000343257 C10orf67Q8IYJ2 551 aa17.4■□□□□ 0.38
CLCN1-201ENST00000343257 FSIP1Q8NA03 581 aa17.4■□□□□ 0.38
CLCN1-201ENST00000343257 SMARCE1Q969G3 411 aa17.4■□□□□ 0.38
CLCN1-201ENST00000343257 XPO4Q9C0E2 1151 aaKnown RBP17.4■□□□□ 0.38
CLCN1-201ENST00000343257 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
CLCN1-201ENST00000343257 EYA1Q99502 592 aa17.39■□□□□ 0.37
CLCN1-201ENST00000343257 TULP2O00295 520 aa17.39■□□□□ 0.37
CLCN1-201ENST00000343257 TRIM66O15016 1216 aa17.39■□□□□ 0.37
CLCN1-201ENST00000343257 ARMCX5Q6P1M9 558 aa17.39■□□□□ 0.37
CLCN1-201ENST00000343257 NBPF11Q86T75 865 aa17.39■□□□□ 0.37
CLCN1-201ENST00000343257 SEC62Q99442 399 aaKnown RBP17.39■□□□□ 0.37
CLCN1-201ENST00000343257 CARD6Q9BX69 1037 aa17.39■□□□□ 0.37
CLCN1-201ENST00000343257 SARM1Q6SZW1 724 aa17.38■□□□□ 0.37
CLCN1-201ENST00000343257 MAP4K1Q92918 833 aa17.38■□□□□ 0.37
CLCN1-201ENST00000343257 TTC21BQ7Z4L5 1316 aa17.38■□□□□ 0.37
CLCN1-201ENST00000343257 PRR36Q9H6K5 1346 aa17.38■□□□□ 0.37
CLCN1-201ENST00000343257 CCT2P78371 535 aaKnown RBP17.38■□□□□ 0.37
CLCN1-201ENST00000343257 CEP57L1Q8IYX8 460 aa17.38■□□□□ 0.37
CLCN1-201ENST00000343257 USHBP1Q8N6Y0 703 aa17.38■□□□□ 0.37
CLCN1-201ENST00000343257 MYO5BQ9ULV0 1848 aa17.38■□□□□ 0.37
CLCN1-201ENST00000343257 A0A1B0GVL5 298 aa17.38■□□□□ 0.37
CLCN1-201ENST00000343257 ZRSR1Q15695 479 aaKnown RBP17.38■□□□□ 0.37
CLCN1-201ENST00000343257 SLFNL1Q499Z3 407 aa17.38■□□□□ 0.37
CLCN1-201ENST00000343257 TEX35Q5T0J7 233 aa17.38■□□□□ 0.37
CLCN1-201ENST00000343257 Q6ZUG5 572 aa17.38■□□□□ 0.37
CLCN1-201ENST00000343257 USP28Q96RU2 1077 aa17.38■□□□□ 0.37
CLCN1-201ENST00000343257 CHPF2Q9P2E5 772 aa17.38■□□□□ 0.37
CLCN1-201ENST00000343257 SFPQP23246 707 aaKnown RBP eCLIP17.37■□□□□ 0.37
CLCN1-201ENST00000343257 CCDC129Q6ZRS4 1044 aa17.37■□□□□ 0.37
CLCN1-201ENST00000343257 IL17REQ8NFR9 667 aa17.37■□□□□ 0.37
CLCN1-201ENST00000343257 EVI5LQ96CN4 794 aa17.37■□□□□ 0.37
CLCN1-201ENST00000343257 ANO10Q9NW15 660 aa17.37■□□□□ 0.37
CLCN1-201ENST00000343257 MLECQ14165 292 aa17.37■□□□□ 0.37
CLCN1-201ENST00000343257 KLHDC4Q8TBB5 520 aa17.37■□□□□ 0.37
CLCN1-201ENST00000343257 GPATCH3Q96I76 525 aa17.37■□□□□ 0.37
CLCN1-201ENST00000343257 C9orf78Q9NZ63 289 aaPredicted RBP17.37■□□□□ 0.37
CLCN1-201ENST00000343257 ALKQ9UM73 1620 aa17.37■□□□□ 0.37
CLCN1-201ENST00000343257 HECW2Q9P2P5 1572 aa17.37■□□□□ 0.37
CLCN1-201ENST00000343257 LCMT1Q9UIC8 334 aa17.36■□□□□ 0.37
CLCN1-201ENST00000343257 CFAP45Q9UL16 551 aa17.36■□□□□ 0.37
CLCN1-201ENST00000343257 TUBGCP6Q96RT7 1819 aa17.36■□□□□ 0.37
CLCN1-201ENST00000343257 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
CLCN1-201ENST00000343257 OAS2P29728 719 aaKnown RBP17.36■□□□□ 0.37
CLCN1-201ENST00000343257 RNF20Q5VTR2 975 aa17.36■□□□□ 0.37
CLCN1-201ENST00000343257 ACEP12821 1306 aa17.36■□□□□ 0.37
CLCN1-201ENST00000343257 PDIA4P13667 645 aaKnown RBP17.36■□□□□ 0.37
CLCN1-201ENST00000343257 LMOD1P29536 600 aaPredicted RBP17.36■□□□□ 0.37
CLCN1-201ENST00000343257 DPCR1Q3MIW9 517 aa17.36■□□□□ 0.37
CLCN1-201ENST00000343257 RSPH14Q9UHP6 348 aa17.36■□□□□ 0.37
CLCN1-201ENST00000343257 TTC41PQ6P2S7 1318 aa17.35■□□□□ 0.37
CLCN1-201ENST00000343257 ADCY9O60503 1353 aa17.35■□□□□ 0.37
CLCN1-201ENST00000343257 GNAT3A8MTJ3 354 aa17.35■□□□□ 0.37
CLCN1-201ENST00000343257 ANKRD1Q15327 319 aa17.35■□□□□ 0.37
CLCN1-201ENST00000343257 ZSWIM4Q9H7M6 989 aa17.35■□□□□ 0.37
CLCN1-201ENST00000343257 HSP90AA4PQ58FG1 418 aa17.35■□□□□ 0.37
CLCN1-201ENST00000343257 CCDC191Q8NCU4 936 aa17.35■□□□□ 0.37
CLCN1-201ENST00000343257 DNAAF4Q8WXU2 420 aa17.35■□□□□ 0.37
CLCN1-201ENST00000343257 NCOA5Q9HCD5 579 aaKnown RBP17.35■□□□□ 0.37
CLCN1-201ENST00000343257 ARGLU1Q9NWB6 273 aaPredicted RBP17.35■□□□□ 0.37
CLCN1-201ENST00000343257 ORC3Q9UBD5 711 aaPredicted RBP17.35■□□□□ 0.37
CLCN1-201ENST00000343257 KCNQ3O43525 872 aa17.34■□□□□ 0.37
CLCN1-201ENST00000343257 EAF2Q96CJ1 260 aaPredicted RBP17.34■□□□□ 0.37
CLCN1-201ENST00000343257 RIMS1Q86UR5 1692 aaKnown RBP17.34■□□□□ 0.37
CLCN1-201ENST00000343257 SASH3O75995 380 aa17.34■□□□□ 0.37
CLCN1-201ENST00000343257 CWF19L2Q2TBE0 894 aaKnown RBP17.34■□□□□ 0.37
CLCN1-201ENST00000343257 HSP90AB4PQ58FF6 505 aa17.34■□□□□ 0.37
CLCN1-201ENST00000343257 OTUD7BQ6GQQ9 843 aa17.34■□□□□ 0.37
CLCN1-201ENST00000343257 L2HGDHQ9H9P8 463 aa17.34■□□□□ 0.37
CLCN1-201ENST00000343257 NFATC2IPQ8NCF5 419 aa17.34■□□□□ 0.37
CLCN1-201ENST00000343257 GSDMDP57764 484 aa17.33■□□□□ 0.37
CLCN1-201ENST00000343257 CLTCQ00610 1675 aaKnown RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms