RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 NLRP3Q96P20 1036 aa23.61■■□□□ 1.37
MUC1-204ENST00000343256 RNF186Q9NXI6 227 aa23.61■■□□□ 1.37
MUC1-204ENST00000343256 SAGE1Q9NXZ1 904 aa23.61■■□□□ 1.37
MUC1-204ENST00000343256 YDJCA8MPS7 323 aa23.6■■□□□ 1.37
MUC1-204ENST00000343256 KIAA2012Q0VF49 1180 aa23.6■■□□□ 1.37
MUC1-204ENST00000343256 PCGF6Q9BYE7 350 aa23.6■■□□□ 1.37
MUC1-204ENST00000343256 ZBTB12Q9Y330 459 aaPredicted RBP23.6■■□□□ 1.37
MUC1-204ENST00000343256 H7C1D1 291 aa23.59■■□□□ 1.37
MUC1-204ENST00000343256 SAMD7Q7Z3H4 446 aa23.59■■□□□ 1.37
MUC1-204ENST00000343256 MPNDQ8N594 471 aa23.59■■□□□ 1.37
MUC1-204ENST00000343256 GBA2Q9HCG7 927 aaPredicted RBP23.59■■□□□ 1.37
MUC1-204ENST00000343256 U2AF1L5P0DN76 240 aaPredicted RBP23.58■■□□□ 1.37
MUC1-204ENST00000343256 U2AF1Q01081 240 aaKnown RBP eCLIP23.58■■□□□ 1.37
MUC1-204ENST00000343256 PPP1R42Q7Z4L9 355 aa23.58■■□□□ 1.37
MUC1-204ENST00000343256 CLSPNQ9HAW4 1339 aa23.58■■□□□ 1.36
MUC1-204ENST00000343256 ADM5C9JUS6 153 aa23.57■■□□□ 1.36
MUC1-204ENST00000343256 ZNF157P51786 506 aaPredicted RBP23.57■■□□□ 1.36
MUC1-204ENST00000343256 TRIM26Q12899 539 aaPredicted RBP23.57■■□□□ 1.36
MUC1-204ENST00000343256 GIGYF2Q6Y7W6 1299 aaKnown RBP23.57■■□□□ 1.36
MUC1-204ENST00000343256 POLR2AP24928 1970 aaKnown RBP23.57■■□□□ 1.36
MUC1-204ENST00000343256 AKAP11Q9UKA4 1901 aa23.57■■□□□ 1.36
MUC1-204ENST00000343256 EGFRP00533 1210 aa23.56■■□□□ 1.36
MUC1-204ENST00000343256 TBC1D10BQ4KMP7 808 aaPredicted RBP23.56■■□□□ 1.36
MUC1-204ENST00000343256 KRT26Q7Z3Y9 468 aa23.56■■□□□ 1.36
MUC1-204ENST00000343256 SP8Q8IXZ3 490 aa23.56■■□□□ 1.36
MUC1-204ENST00000343256 CCDC102AQ96A19 550 aa23.56■■□□□ 1.36
MUC1-204ENST00000343256 CFAP53Q96M91 514 aa23.56■■□□□ 1.36
MUC1-204ENST00000343256 HTATSF1O43719 755 aaKnown RBP23.55■■□□□ 1.36
MUC1-204ENST00000343256 CTU1Q7Z7A3 348 aaKnown RBP23.55■■□□□ 1.36
MUC1-204ENST00000343256 C2orf69Q8N8R5 385 aa23.55■■□□□ 1.36
MUC1-204ENST00000343256 KDM3BQ7LBC6 1761 aa23.55■■□□□ 1.36
MUC1-204ENST00000343256 SLC10A5Q5PT55 438 aa23.54■■□□□ 1.36
MUC1-204ENST00000343256 RBM26Q5T8P6 1007 aaKnown RBP23.54■■□□□ 1.36
MUC1-204ENST00000343256 UTP14AQ9BVJ6 771 aaKnown RBP23.54■■□□□ 1.36
MUC1-204ENST00000343256 NUDCQ9Y266 331 aa23.54■■□□□ 1.36
MUC1-204ENST00000343256 LAMB2P55268 1798 aa23.54■■□□□ 1.36
MUC1-204ENST00000343256 BBOX1O75936 387 aa23.53■■□□□ 1.36
MUC1-204ENST00000343256 EIF4A1P60842 406 aaKnown RBP23.53■■□□□ 1.36
MUC1-204ENST00000343256 PARP10Q53GL7 1025 aa23.53■■□□□ 1.36
MUC1-204ENST00000343256 CSRNP1Q96S65 589 aa23.53■■□□□ 1.36
MUC1-204ENST00000343256 TAF1P21675 1872 aa23.53■■□□□ 1.36
MUC1-204ENST00000343256 PSMD14O00487 310 aa23.52■■□□□ 1.36
MUC1-204ENST00000343256 HCLS1P14317 486 aaPredicted RBP23.52■■□□□ 1.36
MUC1-204ENST00000343256 THUMPD2Q9BTF0 503 aaKnown RBP23.52■■□□□ 1.36
MUC1-204ENST00000343256 HPS5Q9UPZ3 1129 aa23.52■■□□□ 1.36
MUC1-204ENST00000343256 DUOX1Q9NRD9 1551 aa23.52■■□□□ 1.36
MUC1-204ENST00000343256 SLC10A3P09131 477 aa23.51■■□□□ 1.35
MUC1-204ENST00000343256 DPF2Q92785 391 aa23.5■■□□□ 1.35
MUC1-204ENST00000343256 DCPSQ96C86 337 aaKnown RBP23.5■■□□□ 1.35
MUC1-204ENST00000343256 DBNDD1Q9H9R9 158 aa23.5■■□□□ 1.35
MUC1-204ENST00000343256 ANKRD36CQ5JPF3 1778 aa23.48■■□□□ 1.35
MUC1-204ENST00000343256 GRAPQ13588 217 aa23.48■■□□□ 1.35
MUC1-204ENST00000343256 DDX46Q7L014 1031 aaKnown RBP23.48■■□□□ 1.35
MUC1-204ENST00000343256 GRAPLQ8TC17 118 aaPredicted RBP23.48■■□□□ 1.35
MUC1-204ENST00000343256 PNISRQ8TF01 805 aaKnown RBP23.48■■□□□ 1.35
MUC1-204ENST00000343256 RIMBP2O15034 1052 aa23.47■■□□□ 1.35
MUC1-204ENST00000343256 ZNF428Q96B54 188 aa23.47■■□□□ 1.35
MUC1-204ENST00000343256 KCNQ5Q9NR82 932 aa23.47■■□□□ 1.35
MUC1-204ENST00000343256 DLG5Q8TDM6 1919 aa23.47■■□□□ 1.35
MUC1-204ENST00000343256 ASTN2O75129 1339 aaPredicted RBP23.46■■□□□ 1.35
MUC1-204ENST00000343256 ANXA1P04083 346 aa23.46■■□□□ 1.35
MUC1-204ENST00000343256 WASHC4Q2M389 1173 aa23.45■■□□□ 1.34
MUC1-204ENST00000343256 LRP10Q7Z4F1 713 aa23.45■■□□□ 1.34
MUC1-204ENST00000343256 RASAL3Q86YV0 1011 aa23.45■■□□□ 1.34
MUC1-204ENST00000343256 GGA3Q9NZ52 723 aa23.45■■□□□ 1.34
MUC1-204ENST00000343256 RTL9Q8NET4 1388 aa23.44■■□□□ 1.34
MUC1-204ENST00000343256 PROSER3Q2NL68 480 aa23.44■■□□□ 1.34
MUC1-204ENST00000343256 KIF4BQ2VIQ3 1234 aa23.44■■□□□ 1.34
MUC1-204ENST00000343256 CDCA5Q96FF9 252 aa23.44■■□□□ 1.34
MUC1-204ENST00000343256 HDAC9Q9UKV0 1011 aa23.44■■□□□ 1.34
MUC1-204ENST00000343256 LRRC37AA6NMS7 1700 aa23.43■■□□□ 1.34
MUC1-204ENST00000343256 PDIA6Q15084 440 aa23.43■■□□□ 1.34
MUC1-204ENST00000343256 DOK7Q18PE1 504 aa23.43■■□□□ 1.34
MUC1-204ENST00000343256 NLRP10Q86W26 655 aa23.43■■□□□ 1.34
MUC1-204ENST00000343256 SULF1Q8IWU6 871 aa23.43■■□□□ 1.34
MUC1-204ENST00000343256 NSFL1CQ9UNZ2 370 aaKnown RBP23.43■■□□□ 1.34
MUC1-204ENST00000343256 ERBB4Q15303 1308 aa23.42■■□□□ 1.34
MUC1-204ENST00000343256 TBC1D8O95759 1140 aa23.42■■□□□ 1.34
MUC1-204ENST00000343256 EIF2S2P20042 333 aaKnown RBP23.42■■□□□ 1.34
MUC1-204ENST00000343256 ECE2O60344 883 aa23.41■■□□□ 1.34
MUC1-204ENST00000343256 RPS12P25398 132 aaKnown RBP23.41■■□□□ 1.34
MUC1-204ENST00000343256 PPP2R1AP30153 589 aa23.41■■□□□ 1.34
MUC1-204ENST00000343256 ZNF296Q8WUU4 475 aaPredicted RBP23.41■■□□□ 1.34
MUC1-204ENST00000343256 POLLQ9UGP5 575 aa23.41■■□□□ 1.34
MUC1-204ENST00000343256 TRMT112Q9UI30 125 aaKnown RBP23.41■■□□□ 1.34
MUC1-204ENST00000343256 C6orf229H3BNL8 230 aa23.4■■□□□ 1.34
MUC1-204ENST00000343256 SH3TC1Q8TE82 1336 aa23.39■■□□□ 1.34
MUC1-204ENST00000343256 AIMP1Q12904 312 aaKnown RBP23.39■■□□□ 1.33
MUC1-204ENST00000343256 PKN2Q16513 984 aaKnown RBP23.39■■□□□ 1.33
MUC1-204ENST00000343256 CELF1Q92879 486 aaKnown RBP23.39■■□□□ 1.33
MUC1-204ENST00000343256 COL4A1P02462 1669 aa23.38■■□□□ 1.33
MUC1-204ENST00000343256 GPSM2P81274 684 aa23.38■■□□□ 1.33
MUC1-204ENST00000343256 MOB2Q70IA6 237 aa23.38■■□□□ 1.33
MUC1-204ENST00000343256 TMC4Q7Z404 712 aa23.38■■□□□ 1.33
MUC1-204ENST00000343256 REM2Q8IYK8 340 aaPredicted RBP23.38■■□□□ 1.33
MUC1-204ENST00000343256 ANGEL2Q5VTE6 544 aaKnown RBP23.37■■□□□ 1.33
MUC1-204ENST00000343256 SCAF8Q9UPN6 1271 aaKnown RBP23.37■■□□□ 1.33
MUC1-204ENST00000343256 SCN9AQ15858 1988 aa23.37■■□□□ 1.33
MUC1-204ENST00000343256 HSP90AB3PQ58FF7 597 aa23.36■■□□□ 1.33
MUC1-204ENST00000343256 COPS6Q7L5N1 327 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 1013.9 ms