RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TFIP11Q9UBB9 837 aaKnown RBP11.37□□□□□ -0.59
HOXA1-201ENST00000343060 HOXB7P09629 217 aa11.37□□□□□ -0.59
HOXA1-201ENST00000343060 TAF7Q15545 349 aaPredicted RBP11.37□□□□□ -0.59
HOXA1-201ENST00000343060 NECTIN2Q92692 538 aa11.37□□□□□ -0.59
HOXA1-201ENST00000343060 PHAXQ9H814 394 aaKnown RBP11.37□□□□□ -0.59
HOXA1-201ENST00000343060 HMG20BQ9P0W2 317 aa11.37□□□□□ -0.59
HOXA1-201ENST00000343060 ROBO2Q9HCK4 1378 aa11.36□□□□□ -0.59
HOXA1-201ENST00000343060 CYP2C19P33261 490 aa11.36□□□□□ -0.59
HOXA1-201ENST00000343060 CCDC93Q567U6 631 aa11.36□□□□□ -0.59
HOXA1-201ENST00000343060 ERC1Q8IUD2 1116 aa11.36□□□□□ -0.59
HOXA1-201ENST00000343060 DHX40Q8IX18 779 aaKnown RBP11.36□□□□□ -0.59
HOXA1-201ENST00000343060 ZSCAN16Q9H4T2 348 aaPredicted RBP11.36□□□□□ -0.59
HOXA1-201ENST00000343060 MRC1P22897 1456 aa11.36□□□□□ -0.59
HOXA1-201ENST00000343060 ABCC6O95255 1503 aa11.36□□□□□ -0.59
HOXA1-201ENST00000343060 TUBB4AP04350 444 aa11.36□□□□□ -0.59
HOXA1-201ENST00000343060 NMIQ13287 307 aaPredicted RBP11.36□□□□□ -0.59
HOXA1-201ENST00000343060 BMS1Q14692 1282 aaKnown RBP11.36□□□□□ -0.59
HOXA1-201ENST00000343060 IL17REQ8NFR9 667 aa11.36□□□□□ -0.59
HOXA1-201ENST00000343060 GTF3C6Q969F1 213 aa11.36□□□□□ -0.59
HOXA1-201ENST00000343060 IMPACTQ9P2X3 320 aa11.36□□□□□ -0.59
HOXA1-201ENST00000343060 PIK3C2AO00443 1686 aa11.35□□□□□ -0.59
HOXA1-201ENST00000343060 KCNJ4P48050 445 aa11.35□□□□□ -0.59
HOXA1-201ENST00000343060 DDX54Q8TDD1 881 aaKnown RBP11.35□□□□□ -0.59
HOXA1-201ENST00000343060 DNAAF4Q8WXU2 420 aa11.35□□□□□ -0.59
HOXA1-201ENST00000343060 CFAP45Q9UL16 551 aa11.35□□□□□ -0.59
HOXA1-201ENST00000343060 FHOD1Q9Y613 1164 aa11.35□□□□□ -0.59
HOXA1-201ENST00000343060 CEMIPQ8WUJ3 1361 aa11.35□□□□□ -0.59
HOXA1-201ENST00000343060 PSDA5PKW4 1024 aaPredicted RBP11.35□□□□□ -0.59
HOXA1-201ENST00000343060 ADD1P35611 737 aaKnown RBP11.35□□□□□ -0.59
HOXA1-201ENST00000343060 FAM227BQ96M60 508 aa11.35□□□□□ -0.59
HOXA1-201ENST00000343060 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.35□□□□□ -0.59
HOXA1-201ENST00000343060 USP16Q9Y5T5 823 aa11.35□□□□□ -0.59
HOXA1-201ENST00000343060 V9GYY5 206 aaPredicted RBP11.35□□□□□ -0.59
HOXA1-201ENST00000343060 MARF1Q9Y4F3 1742 aaKnown RBP11.34□□□□□ -0.59
HOXA1-201ENST00000343060 USPL1Q5W0Q7 1092 aa11.34□□□□□ -0.59
HOXA1-201ENST00000343060 ST7Q9NRC1 585 aa11.34□□□□□ -0.59
HOXA1-201ENST00000343060 ANO10Q9NW15 660 aa11.34□□□□□ -0.59
HOXA1-201ENST00000343060 RCOR1Q9UKL0 485 aa11.34□□□□□ -0.59
HOXA1-201ENST00000343060 SNW1Q13573 536 aaKnown RBP11.34□□□□□ -0.59
HOXA1-201ENST00000343060 DHX8Q14562 1220 aaKnown RBP11.34□□□□□ -0.59
HOXA1-201ENST00000343060 E4F1Q66K89 784 aaPredicted RBP11.34□□□□□ -0.59
HOXA1-201ENST00000343060 NBPF11Q86T75 865 aa11.34□□□□□ -0.59
HOXA1-201ENST00000343060 ENGASEQ8NFI3 743 aa11.34□□□□□ -0.59
HOXA1-201ENST00000343060 BRF1Q92994 677 aa11.34□□□□□ -0.59
HOXA1-201ENST00000343060 NOL10Q9BSC4 688 aaKnown RBP11.34□□□□□ -0.59
HOXA1-201ENST00000343060 SLIT1O75093 1534 aa11.34□□□□□ -0.59
HOXA1-201ENST00000343060 A0A0D9SFI3 127 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 ZBTB22O15209 634 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 ZRANB2O95218 330 aaKnown RBP eCLIP11.33□□□□□ -0.6
HOXA1-201ENST00000343060 IFIT2P09913 472 aaKnown RBP11.33□□□□□ -0.6
HOXA1-201ENST00000343060 OS9Q13438 667 aaPredicted RBP11.33□□□□□ -0.6
HOXA1-201ENST00000343060 NCAPD2Q15021 1401 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 ATL3Q6DD88 541 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 CCDC150Q8NCX0 1101 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 SMARCC2Q8TAQ2 1214 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 GOLPH3LQ9H4A5 285 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 TAF6LQ9Y6J9 622 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 JAK2O60674 1132 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 CLCN6P51797 869 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 KRT32Q14532 448 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 NAA16Q6N069 864 aaPredicted RBP11.33□□□□□ -0.6
HOXA1-201ENST00000343060 CEP57L1Q8IYX8 460 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 PPP1R13BQ96KQ4 1090 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 CHMP4AQ9BY43 222 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 TSPYL1Q9H0U9 437 aa11.33□□□□□ -0.6
HOXA1-201ENST00000343060 TRMT1Q9NXH9 659 aaKnown RBP11.33□□□□□ -0.6
HOXA1-201ENST00000343060 ADAMTS13Q76LX8 1427 aa11.32□□□□□ -0.6
HOXA1-201ENST00000343060 RFX7Q2KHR2 1363 aa11.32□□□□□ -0.6
HOXA1-201ENST00000343060 PNMA6AP0CW24 399 aaPredicted RBP11.32□□□□□ -0.6
HOXA1-201ENST00000343060 DNAJC2Q99543 621 aaKnown RBP11.32□□□□□ -0.6
HOXA1-201ENST00000343060 LLPHQ9BRT6 129 aaKnown RBP11.32□□□□□ -0.6
HOXA1-201ENST00000343060 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.32□□□□□ -0.6
HOXA1-201ENST00000343060 DIP2BQ9P265 1576 aa11.32□□□□□ -0.6
HOXA1-201ENST00000343060 TSPOAP1O95153 1857 aa11.32□□□□□ -0.6
HOXA1-201ENST00000343060 BECN2A8MW95 431 aa11.32□□□□□ -0.6
HOXA1-201ENST00000343060 ALDH1L1O75891 902 aa11.32□□□□□ -0.6
HOXA1-201ENST00000343060 CAPN2P17655 700 aa11.32□□□□□ -0.6
HOXA1-201ENST00000343060 PLA2G4AP47712 749 aa11.32□□□□□ -0.6
HOXA1-201ENST00000343060 FILIP1Q7Z7B0 1213 aa11.32□□□□□ -0.6
HOXA1-201ENST00000343060 CCAR1Q8IX12 1150 aaKnown RBP11.32□□□□□ -0.6
HOXA1-201ENST00000343060 TCEANC2Q96MN5 208 aa11.32□□□□□ -0.6
HOXA1-201ENST00000343060 BPIFA3Q9BQP9 254 aa11.32□□□□□ -0.6
HOXA1-201ENST00000343060 UBXN6Q9BZV1 441 aa11.32□□□□□ -0.6
HOXA1-201ENST00000343060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.32□□□□□ -0.6
HOXA1-201ENST00000343060 PI4KAP2A4QPH2 592 aa11.31□□□□□ -0.6
HOXA1-201ENST00000343060 EIF4A1P60842 406 aaKnown RBP11.31□□□□□ -0.6
HOXA1-201ENST00000343060 FAM160A1Q05DH4 1040 aa11.31□□□□□ -0.6
HOXA1-201ENST00000343060 ERCC6LQ2NKX8 1250 aa11.31□□□□□ -0.6
HOXA1-201ENST00000343060 AACSQ86V21 672 aa11.31□□□□□ -0.6
HOXA1-201ENST00000343060 PI4KAP1Q8N8J0 262 aa11.31□□□□□ -0.6
HOXA1-201ENST00000343060 PHLPP2Q6ZVD8 1323 aa11.31□□□□□ -0.6
HOXA1-201ENST00000343060 CCDC73Q6ZRK6 1079 aa11.31□□□□□ -0.6
HOXA1-201ENST00000343060 ERICH4A6NGS2 130 aa11.3□□□□□ -0.6
HOXA1-201ENST00000343060 ATP8B1O43520 1251 aa11.3□□□□□ -0.6
HOXA1-201ENST00000343060 TAF5LO75529 589 aa11.3□□□□□ -0.6
HOXA1-201ENST00000343060 CDK11BP21127 795 aaKnown RBP11.3□□□□□ -0.6
HOXA1-201ENST00000343060 MUM1L1Q5H9M0 696 aa11.3□□□□□ -0.6
HOXA1-201ENST00000343060 AOPEPQ8N6M6 819 aa11.3□□□□□ -0.6
HOXA1-201ENST00000343060 LRRN4CLQ8ND94 238 aa11.3□□□□□ -0.6
HOXA1-201ENST00000343060 IPO4Q8TEX9 1081 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms