RNA–Protein interactions for RNA: ENST00000342878.2

SCGB1C1-201, Transcript of secretoglobin family 1C member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCGB1C1, Length 431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB1C1-201ENST00000342878 SYNE4Q8N205 404 aa16.56■□□□□ 0.24
SCGB1C1-201ENST00000342878 CNKSR1Q969H4 720 aa16.56■□□□□ 0.24
SCGB1C1-201ENST00000342878 RBM17Q96I25 401 aaKnown RBP16.56■□□□□ 0.24
SCGB1C1-201ENST00000342878 USP44Q9H0E7 712 aa16.56■□□□□ 0.24
SCGB1C1-201ENST00000342878 H7C1W4 665 aa16.55■□□□□ 0.24
SCGB1C1-201ENST00000342878 ALDH1B1P30837 517 aa16.55■□□□□ 0.24
SCGB1C1-201ENST00000342878 HDAC1Q13547 482 aaPredicted RBP16.55■□□□□ 0.24
SCGB1C1-201ENST00000342878 DALRD3Q5D0E6 543 aaKnown RBP16.55■□□□□ 0.24
SCGB1C1-201ENST00000342878 STYK1Q6J9G0 422 aa16.55■□□□□ 0.24
SCGB1C1-201ENST00000342878 BCS1LQ9Y276 419 aa16.55■□□□□ 0.24
SCGB1C1-201ENST00000342878 SRGNP10124 158 aa16.54■□□□□ 0.24
SCGB1C1-201ENST00000342878 CCDC152Q4G0S7 254 aa16.54■□□□□ 0.24
SCGB1C1-201ENST00000342878 DDX46Q7L014 1031 aaKnown RBP16.54■□□□□ 0.24
SCGB1C1-201ENST00000342878 CENPQQ7L2Z9 268 aaPredicted RBP16.54■□□□□ 0.24
SCGB1C1-201ENST00000342878 TTLL6Q8N841 843 aa16.54■□□□□ 0.24
SCGB1C1-201ENST00000342878 TMX4Q9H1E5 349 aaPredicted RBP16.54■□□□□ 0.24
SCGB1C1-201ENST00000342878 TNNQ9UQP3 1299 aa16.54■□□□□ 0.24
SCGB1C1-201ENST00000342878 ANKRD31Q8N7Z5 1873 aa16.54■□□□□ 0.24
SCGB1C1-201ENST00000342878 HSP90AB4PQ58FF6 505 aa16.53■□□□□ 0.24
SCGB1C1-201ENST00000342878 GCC1Q96CN9 775 aa16.53■□□□□ 0.24
SCGB1C1-201ENST00000342878 ZBTB47Q9UFB7 747 aaPredicted RBP16.53■□□□□ 0.24
SCGB1C1-201ENST00000342878 KLRG2A4D1S0 409 aaPredicted RBP16.52■□□□□ 0.24
SCGB1C1-201ENST00000342878 ANKRD44Q8N8A2 993 aa16.52■□□□□ 0.24
SCGB1C1-201ENST00000342878 MEIS3Q99687 375 aa16.52■□□□□ 0.24
SCGB1C1-201ENST00000342878 CHMP3Q9Y3E7 222 aa16.52■□□□□ 0.24
SCGB1C1-201ENST00000342878 TNRC6CQ9HCJ0 1690 aaKnown RBP16.52■□□□□ 0.23
SCGB1C1-201ENST00000342878 KCNA3P22001 575 aa16.51■□□□□ 0.23
SCGB1C1-201ENST00000342878 CTSWP56202 376 aa16.51■□□□□ 0.23
SCGB1C1-201ENST00000342878 SF3B3Q15393 1217 aaKnown RBP16.51■□□□□ 0.23
SCGB1C1-201ENST00000342878 CRY2Q49AN0 593 aa16.51■□□□□ 0.23
SCGB1C1-201ENST00000342878 CCDC85AQ96PX6 553 aaPredicted RBP16.51■□□□□ 0.23
SCGB1C1-201ENST00000342878 ATP8B2P98198 1209 aa16.5■□□□□ 0.23
SCGB1C1-201ENST00000342878 MTX1Q13505 466 aa16.5■□□□□ 0.23
SCGB1C1-201ENST00000342878 C3orf67Q6ZVT6 689 aa16.5■□□□□ 0.23
SCGB1C1-201ENST00000342878 CRAMP1Q96RY5 1269 aa16.5■□□□□ 0.23
SCGB1C1-201ENST00000342878 PLA2G12BQ9BX93 195 aa16.5■□□□□ 0.23
SCGB1C1-201ENST00000342878 ZNF219Q9P2Y4 722 aaPredicted RBP16.5■□□□□ 0.23
SCGB1C1-201ENST00000342878 LAMB2P55268 1798 aa16.5■□□□□ 0.23
SCGB1C1-201ENST00000342878 DDX60Q8IY21 1712 aaKnown RBP16.5■□□□□ 0.23
SCGB1C1-201ENST00000342878 GRIN3BO60391 1043 aa16.49■□□□□ 0.23
SCGB1C1-201ENST00000342878 NBPF7P0C2Y1 421 aaPredicted RBP16.49■□□□□ 0.23
SCGB1C1-201ENST00000342878 COL11A2P13942 1736 aaPredicted RBP16.49■□□□□ 0.23
SCGB1C1-201ENST00000342878 HOXA10P31260 410 aaPredicted RBP16.49■□□□□ 0.23
SCGB1C1-201ENST00000342878 CASP7P55210 303 aa16.49■□□□□ 0.23
SCGB1C1-201ENST00000342878 PRPF40BQ6NWY9 871 aaKnown RBP16.49■□□□□ 0.23
SCGB1C1-201ENST00000342878 KIAA1551Q9HCM1 1747 aa16.49■□□□□ 0.23
SCGB1C1-201ENST00000342878 DLEC1Q9Y238 1755 aa16.49■□□□□ 0.23
SCGB1C1-201ENST00000342878 PPEF1O14829 653 aaPredicted RBP16.48■□□□□ 0.23
SCGB1C1-201ENST00000342878 GRAPQ13588 217 aa16.48■□□□□ 0.23
SCGB1C1-201ENST00000342878 TAF7LQ5H9L4 462 aa16.48■□□□□ 0.23
SCGB1C1-201ENST00000342878 SOGA3Q5TF21 947 aa16.48■□□□□ 0.23
SCGB1C1-201ENST00000342878 GRAPLQ8TC17 118 aaPredicted RBP16.48■□□□□ 0.23
SCGB1C1-201ENST00000342878 CDC5LQ99459 802 aaKnown RBP16.48■□□□□ 0.23
SCGB1C1-201ENST00000342878 BBOX1O75936 387 aa16.47■□□□□ 0.23
SCGB1C1-201ENST00000342878 CEP85Q6P2H3 762 aa16.47■□□□□ 0.23
SCGB1C1-201ENST00000342878 TTLL11Q8NHH1 800 aa16.47■□□□□ 0.23
SCGB1C1-201ENST00000342878 SUCLG2Q96I99 432 aa16.47■□□□□ 0.23
SCGB1C1-201ENST00000342878 PCDHB15Q9Y5E8 787 aa16.47■□□□□ 0.23
SCGB1C1-201ENST00000342878 LRRFIP2Q9Y608 721 aaKnown RBP16.47■□□□□ 0.23
SCGB1C1-201ENST00000342878 ANKRD18BA2A2Z9 1011 aa16.46■□□□□ 0.23
SCGB1C1-201ENST00000342878 C21orf2O43822 256 aa16.46■□□□□ 0.23
SCGB1C1-201ENST00000342878 IFIT5Q13325 482 aaKnown RBP16.46■□□□□ 0.23
SCGB1C1-201ENST00000342878 CCDC57Q2TAC2 916 aa16.46■□□□□ 0.23
SCGB1C1-201ENST00000342878 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.23
SCGB1C1-201ENST00000342878 TMC4Q7Z404 712 aa16.46■□□□□ 0.23
SCGB1C1-201ENST00000342878 ERC1Q8IUD2 1116 aa16.46■□□□□ 0.23
SCGB1C1-201ENST00000342878 ANKRD18AQ8IVF6 992 aa16.46■□□□□ 0.23
SCGB1C1-201ENST00000342878 GREM2Q9H772 168 aa16.46■□□□□ 0.23
SCGB1C1-201ENST00000342878 FBXO3Q9UK99 471 aa16.46■□□□□ 0.23
SCGB1C1-201ENST00000342878 SRGAP3O43295 1099 aa16.45■□□□□ 0.22
SCGB1C1-201ENST00000342878 RAB11FIP3O75154 756 aa16.45■□□□□ 0.22
SCGB1C1-201ENST00000342878 YBX3P16989 372 aaKnown RBP eCLIP16.45■□□□□ 0.22
SCGB1C1-201ENST00000342878 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
SCGB1C1-201ENST00000342878 RABL6Q3YEC7 729 aaPredicted RBP16.45■□□□□ 0.22
SCGB1C1-201ENST00000342878 CCDC93Q567U6 631 aa16.45■□□□□ 0.22
SCGB1C1-201ENST00000342878 B4GALNT3Q6L9W6 998 aa16.45■□□□□ 0.22
SCGB1C1-201ENST00000342878 ARHGAP27Q6ZUM4 889 aa16.45■□□□□ 0.22
SCGB1C1-201ENST00000342878 SSH3Q8TE77 659 aa16.45■□□□□ 0.22
SCGB1C1-201ENST00000342878 BICC1Q9H694 974 aaKnown RBP16.45■□□□□ 0.22
SCGB1C1-201ENST00000342878 CACNA1SQ13698 1873 aa16.45■□□□□ 0.22
SCGB1C1-201ENST00000342878 MYH3P11055 1940 aa16.45■□□□□ 0.22
SCGB1C1-201ENST00000342878 ITGA6P23229 1130 aa16.44■□□□□ 0.22
SCGB1C1-201ENST00000342878 RPS8P62241 208 aaKnown RBP16.44■□□□□ 0.22
SCGB1C1-201ENST00000342878 FOXO4P98177 505 aa16.44■□□□□ 0.22
SCGB1C1-201ENST00000342878 FAM161AQ3B820 660 aa16.44■□□□□ 0.22
SCGB1C1-201ENST00000342878 CC2D2BQ6DHV5 1058 aa16.44■□□□□ 0.22
SCGB1C1-201ENST00000342878 MPHOSPH8Q99549 860 aa16.44■□□□□ 0.22
SCGB1C1-201ENST00000342878 SEC31BQ9NQW1 1179 aa16.44■□□□□ 0.22
SCGB1C1-201ENST00000342878 BRCA1P38398 1863 aaKnown RBP16.44■□□□□ 0.22
SCGB1C1-201ENST00000342878 RTL9Q8NET4 1388 aa16.43■□□□□ 0.22
SCGB1C1-201ENST00000342878 CSF1RP07333 972 aa16.43■□□□□ 0.22
SCGB1C1-201ENST00000342878 CELF1Q92879 486 aaKnown RBP16.43■□□□□ 0.22
SCGB1C1-201ENST00000342878 DCTPP1Q9H773 170 aa16.43■□□□□ 0.22
SCGB1C1-201ENST00000342878 GRIPAP1Q4V328 841 aa16.42■□□□□ 0.22
SCGB1C1-201ENST00000342878 EPHA10Q5JZY3 1008 aa16.42■□□□□ 0.22
SCGB1C1-201ENST00000342878 SMC5Q8IY18 1101 aa16.42■□□□□ 0.22
SCGB1C1-201ENST00000342878 RTKN2Q8IZC4 609 aa16.42■□□□□ 0.22
SCGB1C1-201ENST00000342878 ATP6V0A2Q9Y487 856 aa16.42■□□□□ 0.22
SCGB1C1-201ENST00000342878 POLA2Q14181 598 aa16.41■□□□□ 0.22
SCGB1C1-201ENST00000342878 SP8Q8IXZ3 490 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms