RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 NLRP3Q96P20 1036 aa25.74■■□□□ 1.71
SNX21-201ENST00000342644 RTL9Q8NET4 1388 aa25.74■■□□□ 1.71
SNX21-201ENST00000342644 ZBTB7AO95365 584 aa25.73■■□□□ 1.71
SNX21-201ENST00000342644 KLRG2A4D1S0 409 aaPredicted RBP25.72■■□□□ 1.71
SNX21-201ENST00000342644 IGHDP01880 384 aa25.72■■□□□ 1.71
SNX21-201ENST00000342644 CCDC152Q4G0S7 254 aa25.72■■□□□ 1.71
SNX21-201ENST00000342644 BRIP1Q9BX63 1249 aa25.72■■□□□ 1.71
SNX21-201ENST00000342644 RFX5P48382 616 aaPredicted RBP25.71■■□□□ 1.71
SNX21-201ENST00000342644 B4GALNT3Q6L9W6 998 aa25.71■■□□□ 1.71
SNX21-201ENST00000342644 TNRC6CQ9HCJ0 1690 aaKnown RBP25.7■■□□□ 1.7
SNX21-201ENST00000342644 CCDC24Q8N4L8 307 aa25.69■■□□□ 1.7
SNX21-201ENST00000342644 DCTPP1Q9H773 170 aa25.69■■□□□ 1.7
SNX21-201ENST00000342644 COPRSQ9NQ92 184 aa25.69■■□□□ 1.7
SNX21-201ENST00000342644 KDM2BQ8NHM5 1336 aa25.69■■□□□ 1.7
SNX21-201ENST00000342644 ANKRD31Q8N7Z5 1873 aa25.69■■□□□ 1.7
SNX21-201ENST00000342644 POLD1P28340 1107 aa25.68■■□□□ 1.7
SNX21-201ENST00000342644 IFIT5Q13325 482 aaKnown RBP25.68■■□□□ 1.7
SNX21-201ENST00000342644 CCDC57Q2TAC2 916 aa25.68■■□□□ 1.7
SNX21-201ENST00000342644 FAM161AQ3B820 660 aa25.68■■□□□ 1.7
SNX21-201ENST00000342644 CRY2Q49AN0 593 aa25.68■■□□□ 1.7
SNX21-201ENST00000342644 C3orf67Q6ZVT6 689 aa25.68■■□□□ 1.7
SNX21-201ENST00000342644 SGIP1Q9BQI5 828 aa25.68■■□□□ 1.7
SNX21-201ENST00000342644 GREM2Q9H772 168 aa25.68■■□□□ 1.7
SNX21-201ENST00000342644 NOP58Q9Y2X3 529 aaKnown RBP25.68■■□□□ 1.7
SNX21-201ENST00000342644 CHMP3Q9Y3E7 222 aa25.68■■□□□ 1.7
SNX21-201ENST00000342644 SMC5Q8IY18 1101 aa25.68■■□□□ 1.7
SNX21-201ENST00000342644 GCC1Q96CN9 775 aa25.68■■□□□ 1.7
SNX21-201ENST00000342644 ATF5Q9Y2D1 282 aaPredicted RBP25.68■■□□□ 1.7
SNX21-201ENST00000342644 ITGA6P23229 1130 aa25.67■■□□□ 1.7
SNX21-201ENST00000342644 PTPN12Q05209 780 aaKnown RBP25.67■■□□□ 1.7
SNX21-201ENST00000342644 CENPQQ7L2Z9 268 aaPredicted RBP25.67■■□□□ 1.7
SNX21-201ENST00000342644 ANKRD18BA2A2Z9 1011 aa25.66■■□□□ 1.7
SNX21-201ENST00000342644 PDE6BP35913 854 aa25.66■■□□□ 1.7
SNX21-201ENST00000342644 FBXO3Q9UK99 471 aa25.66■■□□□ 1.7
SNX21-201ENST00000342644 C10orf71Q711Q0 1435 aa25.65■■□□□ 1.7
SNX21-201ENST00000342644 CCDC85AQ96PX6 553 aaPredicted RBP25.65■■□□□ 1.7
SNX21-201ENST00000342644 PDZRN3Q9UPQ7 1066 aa25.65■■□□□ 1.7
SNX21-201ENST00000342644 PTGER2P43116 358 aa25.63■■□□□ 1.69
SNX21-201ENST00000342644 HSP90AB4PQ58FF6 505 aa25.63■■□□□ 1.69
SNX21-201ENST00000342644 KIF13BQ9NQT8 1826 aa25.63■■□□□ 1.69
SNX21-201ENST00000342644 HOXA10P31260 410 aaPredicted RBP25.63■■□□□ 1.69
SNX21-201ENST00000342644 SURF6O75683 361 aaKnown RBP25.62■■□□□ 1.69
SNX21-201ENST00000342644 CDC5LQ99459 802 aaKnown RBP25.62■■□□□ 1.69
SNX21-201ENST00000342644 PA2G4Q9UQ80 394 aaKnown RBP25.62■■□□□ 1.69
SNX21-201ENST00000342644 RAB11FIP3O75154 756 aa25.61■■□□□ 1.69
SNX21-201ENST00000342644 DDX46Q7L014 1031 aaKnown RBP25.61■■□□□ 1.69
SNX21-201ENST00000342644 KLHDC4Q8TBB5 520 aa25.61■■□□□ 1.69
SNX21-201ENST00000342644 SPON1Q9HCB6 807 aa25.61■■□□□ 1.69
SNX21-201ENST00000342644 SEC31BQ9NQW1 1179 aa25.61■■□□□ 1.69
SNX21-201ENST00000342644 LRP5O75197 1615 aa25.6■■□□□ 1.69
SNX21-201ENST00000342644 CIAO1O76071 339 aa25.6■■□□□ 1.69
SNX21-201ENST00000342644 SRGNP10124 158 aa25.6■■□□□ 1.69
SNX21-201ENST00000342644 G3BP1Q13283 466 aaKnown RBP eCLIP25.59■■□□□ 1.69
SNX21-201ENST00000342644 TAF7LQ5H9L4 462 aa25.59■■□□□ 1.69
SNX21-201ENST00000342644 RPGRQ92834 1020 aaKnown RBP25.59■■□□□ 1.69
SNX21-201ENST00000342644 RBM17Q96I25 401 aaKnown RBP25.59■■□□□ 1.69
SNX21-201ENST00000342644 ZNF594Q96JF6 807 aaPredicted RBP25.59■■□□□ 1.69
SNX21-201ENST00000342644 CRAMP1Q96RY5 1269 aa25.59■■□□□ 1.69
SNX21-201ENST00000342644 EXOC6BQ9Y2D4 811 aa25.59■■□□□ 1.69
SNX21-201ENST00000342644 EYA2O00167 538 aa25.58■■□□□ 1.69
SNX21-201ENST00000342644 NPR1P16066 1061 aa25.58■■□□□ 1.68
SNX21-201ENST00000342644 IGHMBP2P38935 993 aaKnown RBP25.58■■□□□ 1.68
SNX21-201ENST00000342644 ERC1Q8IUD2 1116 aa25.58■■□□□ 1.68
SNX21-201ENST00000342644 IL15P40933 162 aaPredicted RBP25.57■■□□□ 1.68
SNX21-201ENST00000342644 RPS8P62241 208 aaKnown RBP25.57■■□□□ 1.68
SNX21-201ENST00000342644 GRAPQ13588 217 aa25.57■■□□□ 1.68
SNX21-201ENST00000342644 LDHAL6AQ6ZMR3 332 aa25.57■■□□□ 1.68
SNX21-201ENST00000342644 ANKRD18AQ8IVF6 992 aa25.57■■□□□ 1.68
SNX21-201ENST00000342644 GRAPLQ8TC17 118 aaPredicted RBP25.57■■□□□ 1.68
SNX21-201ENST00000342644 MASTLQ96GX5 879 aa25.57■■□□□ 1.68
SNX21-201ENST00000342644 COL11A2P13942 1736 aaPredicted RBP25.57■■□□□ 1.68
SNX21-201ENST00000342644 H0YIN7 160 aa25.56■■□□□ 1.68
SNX21-201ENST00000342644 ATG9AQ7Z3C6 839 aa25.56■■□□□ 1.68
SNX21-201ENST00000342644 CELF1Q92879 486 aaKnown RBP25.56■■□□□ 1.68
SNX21-201ENST00000342644 SIL1Q9H173 461 aa25.56■■□□□ 1.68
SNX21-201ENST00000342644 BSDC1Q9NW68 430 aaPredicted RBP25.56■■□□□ 1.68
SNX21-201ENST00000342644 RIPOR2Q9Y4F9 1068 aa25.56■■□□□ 1.68
SNX21-201ENST00000342644 TAF1P21675 1872 aa25.56■■□□□ 1.68
SNX21-201ENST00000342644 C2CD5Q86YS7 1000 aa25.55■■□□□ 1.68
SNX21-201ENST00000342644 KIF1BPQ96EK5 621 aa25.55■■□□□ 1.68
SNX21-201ENST00000342644 MPHOSPH8Q99549 860 aa25.55■■□□□ 1.68
SNX21-201ENST00000342644 COL4A1P02462 1669 aa25.55■■□□□ 1.68
SNX21-201ENST00000342644 ALDH1B1P30837 517 aa25.54■■□□□ 1.68
SNX21-201ENST00000342644 TGFB2P61812 414 aa25.54■■□□□ 1.68
SNX21-201ENST00000342644 LRRC24Q50LG9 513 aa25.54■■□□□ 1.68
SNX21-201ENST00000342644 STYK1Q6J9G0 422 aa25.54■■□□□ 1.68
SNX21-201ENST00000342644 CD2APQ9Y5K6 639 aa25.54■■□□□ 1.68
SNX21-201ENST00000342644 BBOX1O75936 387 aa25.53■■□□□ 1.68
SNX21-201ENST00000342644 SASH1O94885 1247 aa25.53■■□□□ 1.68
SNX21-201ENST00000342644 NUCB1Q02818 461 aa25.53■■□□□ 1.68
SNX21-201ENST00000342644 OS9Q13438 667 aaPredicted RBP25.53■■□□□ 1.68
SNX21-201ENST00000342644 RHPN1Q8TCX5 695 aa25.53■■□□□ 1.68
SNX21-201ENST00000342644 PUS3Q9BZE2 481 aaKnown RBP25.53■■□□□ 1.68
SNX21-201ENST00000342644 LRRCC1Q9C099 1032 aa25.53■■□□□ 1.68
SNX21-201ENST00000342644 CNNM1Q9NRU3 951 aa25.53■■□□□ 1.68
SNX21-201ENST00000342644 DLEC1Q9Y238 1755 aa25.53■■□□□ 1.68
SNX21-201ENST00000342644 ANKRD45Q5TZF3 282 aa25.52■■□□□ 1.68
SNX21-201ENST00000342644 TMC4Q7Z404 712 aa25.52■■□□□ 1.68
SNX21-201ENST00000342644 MROH5Q6ZUA9 1318 aa25.51■■□□□ 1.67
SNX21-201ENST00000342644 SPEF2Q9C093 1822 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms