RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 KIAA1468Q9P260 1216 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 PITPNM2Q9BZ72 1349 aa4.66□□□□□ -1.66
CCDC66-202ENST00000341455 EXOC5O00471 708 aa4.66□□□□□ -1.66
CCDC66-202ENST00000341455 BCAMP50895 628 aa4.66□□□□□ -1.66
CCDC66-202ENST00000341455 TMCO4Q5TGY1 634 aa4.66□□□□□ -1.66
CCDC66-202ENST00000341455 NLGN2Q8NFZ4 835 aa4.66□□□□□ -1.66
CCDC66-202ENST00000341455 LRRC4BQ9NT99 713 aa4.66□□□□□ -1.66
CCDC66-202ENST00000341455 WBP1LQ9NX94 342 aa4.66□□□□□ -1.66
CCDC66-202ENST00000341455 ERVV-2B6SEH9 535 aa4.66□□□□□ -1.66
CCDC66-202ENST00000341455 RBM25P49756 843 aaKnown RBP4.66□□□□□ -1.66
CCDC66-202ENST00000341455 MYT1Q01538 1121 aa4.66□□□□□ -1.66
CCDC66-202ENST00000341455 CCDC88AQ3V6T2 1871 aa4.66□□□□□ -1.66
CCDC66-202ENST00000341455 LCE2AQ5TA79 106 aaPredicted RBP4.66□□□□□ -1.66
CCDC66-202ENST00000341455 PACS2Q86VP3 889 aa4.66□□□□□ -1.66
CCDC66-202ENST00000341455 SNED1Q8TER0 1413 aa4.66□□□□□ -1.66
CCDC66-202ENST00000341455 HSP90AB1P08238 724 aaKnown RBP4.65□□□□□ -1.66
CCDC66-202ENST00000341455 MFAP1P55081 439 aaKnown RBP4.65□□□□□ -1.66
CCDC66-202ENST00000341455 MLLT1Q03111 559 aaPredicted RBP4.65□□□□□ -1.66
CCDC66-202ENST00000341455 RRS1Q15050 365 aaKnown RBP4.65□□□□□ -1.66
CCDC66-202ENST00000341455 AKAP4Q5JQC9 854 aa4.65□□□□□ -1.66
CCDC66-202ENST00000341455 HPS5Q9UPZ3 1129 aa4.65□□□□□ -1.66
CCDC66-202ENST00000341455 PCDHGA10Q9Y5H3 936 aa4.65□□□□□ -1.66
CCDC66-202ENST00000341455 WIPF1O43516 503 aa4.65□□□□□ -1.67
CCDC66-202ENST00000341455 HSPA8P11142 646 aaKnown RBP4.65□□□□□ -1.67
CCDC66-202ENST00000341455 PHKG2P15735 406 aa4.65□□□□□ -1.67
CCDC66-202ENST00000341455 AMPHP49418 695 aa4.65□□□□□ -1.67
CCDC66-202ENST00000341455 EVA1CP58658 441 aa4.65□□□□□ -1.67
CCDC66-202ENST00000341455 PPP4CP60510 307 aa4.64□□□□□ -1.67
CCDC66-202ENST00000341455 ZC3H6P61129 1189 aaKnown RBP4.64□□□□□ -1.67
CCDC66-202ENST00000341455 DDX10Q13206 875 aaKnown RBP4.64□□□□□ -1.67
CCDC66-202ENST00000341455 DDRGK1Q96HY6 314 aa4.64□□□□□ -1.67
CCDC66-202ENST00000341455 PRR14Q9BWN1 585 aa4.64□□□□□ -1.67
CCDC66-202ENST00000341455 RBM27Q9P2N5 1060 aaKnown RBP4.64□□□□□ -1.67
CCDC66-202ENST00000341455 ZNF853P0CG23 659 aa4.64□□□□□ -1.67
CCDC66-202ENST00000341455 COL9A1P20849 921 aa4.64□□□□□ -1.67
CCDC66-202ENST00000341455 MLLT3P42568 568 aaPredicted RBP4.64□□□□□ -1.67
CCDC66-202ENST00000341455 MAP3K9P80192 1104 aa4.64□□□□□ -1.67
CCDC66-202ENST00000341455 CRIPAKQ8N1N5 446 aa4.64□□□□□ -1.67
CCDC66-202ENST00000341455 GAS2L2Q8NHY3 880 aa4.64□□□□□ -1.67
CCDC66-202ENST00000341455 GZF1Q9H116 711 aaPredicted RBP4.64□□□□□ -1.67
CCDC66-202ENST00000341455 SPG7Q9UQ90 795 aa4.64□□□□□ -1.67
CCDC66-202ENST00000341455 NUDCQ9Y266 331 aa4.64□□□□□ -1.67
CCDC66-202ENST00000341455 EP400Q96L91 3159 aa4.64□□□□□ -1.67
CCDC66-202ENST00000341455 CHRNA2Q15822 529 aa4.64□□□□□ -1.67
CCDC66-202ENST00000341455 TRMT2AQ8IZ69 625 aaKnown RBP4.64□□□□□ -1.67
CCDC66-202ENST00000341455 CFHR5Q9BXR6 569 aa4.64□□□□□ -1.67
CCDC66-202ENST00000341455 CYP27B1O15528 508 aa4.63□□□□□ -1.67
CCDC66-202ENST00000341455 TATP17735 454 aaPredicted RBP4.63□□□□□ -1.67
CCDC66-202ENST00000341455 INSM1Q01101 510 aaPredicted RBP4.63□□□□□ -1.67
CCDC66-202ENST00000341455 GRIPAP1Q4V328 841 aa4.63□□□□□ -1.67
CCDC66-202ENST00000341455 PLEKHO1Q53GL0 409 aaPredicted RBP4.63□□□□□ -1.67
CCDC66-202ENST00000341455 COL23A1Q86Y22 540 aaPredicted RBP4.63□□□□□ -1.67
CCDC66-202ENST00000341455 ZCRB1Q8TBF4 217 aaKnown RBP4.63□□□□□ -1.67
CCDC66-202ENST00000341455 RUNDC1Q96C34 613 aa4.63□□□□□ -1.67
CCDC66-202ENST00000341455 ABHD8Q96I13 439 aa4.63□□□□□ -1.67
CCDC66-202ENST00000341455 ARIH1Q9Y4X5 557 aaPredicted RBP4.63□□□□□ -1.67
CCDC66-202ENST00000341455 ANP32CO43423 234 aa4.63□□□□□ -1.67
CCDC66-202ENST00000341455 MAP2K1Q02750 393 aaPredicted RBP4.63□□□□□ -1.67
CCDC66-202ENST00000341455 NFE2L2Q16236 605 aa4.63□□□□□ -1.67
CCDC66-202ENST00000341455 CC2D1BQ5T0F9 858 aaKnown RBP4.63□□□□□ -1.67
CCDC66-202ENST00000341455 NUTM2GQ5VZR2 741 aa4.63□□□□□ -1.67
CCDC66-202ENST00000341455 CDHR2Q9BYE9 1310 aa4.63□□□□□ -1.67
CCDC66-202ENST00000341455 HOXB7P09629 217 aa4.62□□□□□ -1.67
CCDC66-202ENST00000341455 IFNL2Q8IZJ0 200 aa4.62□□□□□ -1.67
CCDC66-202ENST00000341455 RETREG2Q8NC44 543 aa4.62□□□□□ -1.67
CCDC66-202ENST00000341455 PDGFDQ9GZP0 370 aaPredicted RBP4.62□□□□□ -1.67
CCDC66-202ENST00000341455 ERBB4Q15303 1308 aa4.62□□□□□ -1.67
CCDC66-202ENST00000341455 GLTPD2A6NH11 291 aa4.62□□□□□ -1.67
CCDC66-202ENST00000341455 LMOD3Q0VAK6 560 aa4.62□□□□□ -1.67
CCDC66-202ENST00000341455 C6orf132Q5T0Z8 1188 aa4.62□□□□□ -1.67
CCDC66-202ENST00000341455 TOM1L2Q6ZVM7 507 aa4.62□□□□□ -1.67
CCDC66-202ENST00000341455 VPS33BQ9H267 617 aa4.62□□□□□ -1.67
CCDC66-202ENST00000341455 MYH14Q7Z406 1995 aaKnown RBP4.62□□□□□ -1.67
CCDC66-202ENST00000341455 KCNA3P22001 575 aa4.62□□□□□ -1.67
CCDC66-202ENST00000341455 WDR63Q8IWG1 891 aa4.62□□□□□ -1.67
CCDC66-202ENST00000341455 LARP6Q9BRS8 491 aaKnown RBP4.62□□□□□ -1.67
CCDC66-202ENST00000341455 A0A1B0GUL6 1792 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 PAPPA2Q9BXP8 1791 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 RNMTO43148 476 aaKnown RBP4.61□□□□□ -1.67
CCDC66-202ENST00000341455 MAP2K2P36507 400 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 IRF5Q13568 498 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 SOGA3Q5TF21 947 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 SERPINA10Q9UK55 444 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 PALLDQ8WX93 1383 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 CAMK2BQ13554 666 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 MCM6Q14566 821 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 MTHFSDQ2M296 383 aaKnown RBP4.61□□□□□ -1.67
CCDC66-202ENST00000341455 PPP1R18Q6NYC8 613 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 LDHDQ86WU2 507 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 RAPGEF4Q8WZA2 1011 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 SLC52A2Q9HAB3 445 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 GOPCQ9HD26 462 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 CCDC87Q9NVE4 849 aa4.61□□□□□ -1.67
CCDC66-202ENST00000341455 GNAT3A8MTJ3 354 aa4.6□□□□□ -1.67
CCDC66-202ENST00000341455 FBLN1P23142 703 aa4.6□□□□□ -1.67
CCDC66-202ENST00000341455 SULT6B1Q6IMI4 303 aa4.6□□□□□ -1.67
CCDC66-202ENST00000341455 C16orf71Q8IYS4 520 aaPredicted RBP4.6□□□□□ -1.67
CCDC66-202ENST00000341455 NLGN1Q8N2Q7 840 aa4.6□□□□□ -1.67
CCDC66-202ENST00000341455 CCDC97Q96F63 343 aaPredicted RBP4.6□□□□□ -1.67
CCDC66-202ENST00000341455 DDX27Q96GQ7 796 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms