RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 BTBD11A6QL63 1104 aa14.02□□□□□ -0.16
RTN3-203ENST00000341307 APBB1O00213 710 aa14.02□□□□□ -0.16
RTN3-203ENST00000341307 PTGS1P23219 599 aa14.02□□□□□ -0.16
RTN3-203ENST00000341307 EIF4A1P60842 406 aaKnown RBP14.02□□□□□ -0.16
RTN3-203ENST00000341307 SART3Q15020 963 aaKnown RBP14.02□□□□□ -0.16
RTN3-203ENST00000341307 ELF2Q15723 593 aa14.02□□□□□ -0.16
RTN3-203ENST00000341307 QTRT2Q9H974 415 aaKnown RBP14.02□□□□□ -0.16
RTN3-203ENST00000341307 RNMTO43148 476 aaKnown RBP14.02□□□□□ -0.17
RTN3-203ENST00000341307 ANXA1P04083 346 aa14.02□□□□□ -0.17
RTN3-203ENST00000341307 PLA2G4AP47712 749 aa14.02□□□□□ -0.17
RTN3-203ENST00000341307 PLCB2Q00722 1185 aa14.02□□□□□ -0.17
RTN3-203ENST00000341307 CEP85Q6P2H3 762 aa14.02□□□□□ -0.17
RTN3-203ENST00000341307 SRLQ86TD4 932 aa14.02□□□□□ -0.17
RTN3-203ENST00000341307 FNBP4Q8N3X1 1017 aaPredicted RBP14.02□□□□□ -0.17
RTN3-203ENST00000341307 CCDC191Q8NCU4 936 aa14.02□□□□□ -0.17
RTN3-203ENST00000341307 CCDC9Q9Y3X0 531 aaKnown RBP14.02□□□□□ -0.17
RTN3-203ENST00000341307 SMARCA5O60264 1052 aaPredicted RBP14.01□□□□□ -0.17
RTN3-203ENST00000341307 CSB-PGBD3P0DP91 1061 aa14.01□□□□□ -0.17
RTN3-203ENST00000341307 BMS1Q14692 1282 aaKnown RBP14.01□□□□□ -0.17
RTN3-203ENST00000341307 AMOTQ4VCS5 1084 aa14.01□□□□□ -0.17
RTN3-203ENST00000341307 LARP1Q6PKG0 1096 aaKnown RBP14.01□□□□□ -0.17
RTN3-203ENST00000341307 USP26Q9BXU7 913 aa14.01□□□□□ -0.17
RTN3-203ENST00000341307 NCAPD2Q15021 1401 aa14.01□□□□□ -0.17
RTN3-203ENST00000341307 PACS2Q86VP3 889 aa14.01□□□□□ -0.17
RTN3-203ENST00000341307 CEP120Q8N960 986 aa14.01□□□□□ -0.17
RTN3-203ENST00000341307 LMO7Q8WWI1 1683 aa14.01□□□□□ -0.17
RTN3-203ENST00000341307 CAMTA1Q9Y6Y1 1673 aa14□□□□□ -0.17
RTN3-203ENST00000341307 PRAMEF22A3QJZ6 481 aa14□□□□□ -0.17
RTN3-203ENST00000341307 ATP2B1P20020 1258 aa14□□□□□ -0.17
RTN3-203ENST00000341307 ST5P78524 1137 aa14□□□□□ -0.17
RTN3-203ENST00000341307 HOMEZQ8IX15 550 aa14□□□□□ -0.17
RTN3-203ENST00000341307 ANKRD44Q8N8A2 993 aa14□□□□□ -0.17
RTN3-203ENST00000341307 BRD1O95696 1058 aa14□□□□□ -0.17
RTN3-203ENST00000341307 DNAJC21Q5F1R6 531 aaKnown RBP14□□□□□ -0.17
RTN3-203ENST00000341307 ILDR2Q71H61 639 aa14□□□□□ -0.17
RTN3-203ENST00000341307 C16orf71Q8IYS4 520 aaPredicted RBP14□□□□□ -0.17
RTN3-203ENST00000341307 BABAM1Q9NWV8 329 aa14□□□□□ -0.17
RTN3-203ENST00000341307 LRRFIP2Q9Y608 721 aaKnown RBP14□□□□□ -0.17
RTN3-203ENST00000341307 LRMPQ12912 555 aa13.99□□□□□ -0.17
RTN3-203ENST00000341307 ZSCAN26Q16670 478 aa13.99□□□□□ -0.17
RTN3-203ENST00000341307 SMARCE1Q969G3 411 aa13.99□□□□□ -0.17
RTN3-203ENST00000341307 CXorf56Q9H5V9 222 aa13.99□□□□□ -0.17
RTN3-203ENST00000341307 CHPF2Q9P2E5 772 aa13.99□□□□□ -0.17
RTN3-203ENST00000341307 CCT4P50991 539 aaKnown RBP13.99□□□□□ -0.17
RTN3-203ENST00000341307 UNC5CLQ8IV45 518 aa13.99□□□□□ -0.17
RTN3-203ENST00000341307 DCTPP1Q9H773 170 aa13.99□□□□□ -0.17
RTN3-203ENST00000341307 GDPD2Q9HCC8 539 aa13.99□□□□□ -0.17
RTN3-203ENST00000341307 RRP15Q9Y3B9 282 aaKnown RBP13.99□□□□□ -0.17
RTN3-203ENST00000341307 TCHHQ07283 1943 aa13.98□□□□□ -0.17
RTN3-203ENST00000341307 SLIT2O94813 1529 aa13.98□□□□□ -0.17
RTN3-203ENST00000341307 A0A1B0GUL7 405 aa13.98□□□□□ -0.17
RTN3-203ENST00000341307 H2AFXP16104 143 aaPredicted RBP13.98□□□□□ -0.17
RTN3-203ENST00000341307 GSCP56915 257 aaPredicted RBP13.98□□□□□ -0.17
RTN3-203ENST00000341307 EVA1CP58658 441 aa13.98□□□□□ -0.17
RTN3-203ENST00000341307 RAPGEF4Q8WZA2 1011 aa13.98□□□□□ -0.17
RTN3-203ENST00000341307 FUCA2Q9BTY2 467 aa13.98□□□□□ -0.17
RTN3-203ENST00000341307 EXOC6BQ9Y2D4 811 aa13.98□□□□□ -0.17
RTN3-203ENST00000341307 PLEKHG2Q9H7P9 1386 aa13.98□□□□□ -0.17
RTN3-203ENST00000341307 IRF6O14896 467 aa13.98□□□□□ -0.17
RTN3-203ENST00000341307 CCDC183Q5T5S1 534 aa13.98□□□□□ -0.17
RTN3-203ENST00000341307 OTUD7AQ8TE49 926 aaPredicted RBP13.98□□□□□ -0.17
RTN3-203ENST00000341307 TAOK2Q9UL54 1235 aa13.98□□□□□ -0.17
RTN3-203ENST00000341307 KDM3BQ7LBC6 1761 aa13.98□□□□□ -0.17
RTN3-203ENST00000341307 MEGF6O75095 1541 aa13.97□□□□□ -0.17
RTN3-203ENST00000341307 PNMA6AP0CW24 399 aaPredicted RBP13.97□□□□□ -0.17
RTN3-203ENST00000341307 RPAP2Q8IXW5 612 aaPredicted RBP13.97□□□□□ -0.17
RTN3-203ENST00000341307 ERO1AQ96HE7 468 aa13.97□□□□□ -0.17
RTN3-203ENST00000341307 CPDO75976 1380 aa13.97□□□□□ -0.17
RTN3-203ENST00000341307 TULP1O00294 542 aaPredicted RBP13.97□□□□□ -0.17
RTN3-203ENST00000341307 TEX35Q5T0J7 233 aa13.97□□□□□ -0.17
RTN3-203ENST00000341307 CEP135Q66GS9 1140 aa13.97□□□□□ -0.17
RTN3-203ENST00000341307 SUFUQ9UMX1 484 aa13.97□□□□□ -0.17
RTN3-203ENST00000341307 COL18A1P39060 1754 aa13.96□□□□□ -0.17
RTN3-203ENST00000341307 CCDC189A1A4V9 331 aa13.96□□□□□ -0.17
RTN3-203ENST00000341307 SLC39A6Q13433 755 aa13.96□□□□□ -0.17
RTN3-203ENST00000341307 FAM43BQ6ZT52 329 aaPredicted RBP13.96□□□□□ -0.17
RTN3-203ENST00000341307 USP48Q86UV5 1035 aa13.96□□□□□ -0.17
RTN3-203ENST00000341307 POLR3GO15318 223 aaPredicted RBP13.96□□□□□ -0.18
RTN3-203ENST00000341307 CDC45O75419 566 aa13.96□□□□□ -0.18
RTN3-203ENST00000341307 TTC31Q49AM3 519 aaPredicted RBP13.96□□□□□ -0.18
RTN3-203ENST00000341307 GOLGA6L1Q8N7Z2 621 aa13.96□□□□□ -0.18
RTN3-203ENST00000341307 ZNF592Q92610 1267 aa13.96□□□□□ -0.18
RTN3-203ENST00000341307 FAM98CQ17RN3 349 aaKnown RBP13.95□□□□□ -0.18
RTN3-203ENST00000341307 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.95□□□□□ -0.18
RTN3-203ENST00000341307 TATP17735 454 aaPredicted RBP13.95□□□□□ -0.18
RTN3-203ENST00000341307 MX1P20591 662 aa13.95□□□□□ -0.18
RTN3-203ENST00000341307 CLCN6P51797 869 aa13.95□□□□□ -0.18
RTN3-203ENST00000341307 E2F4Q16254 413 aa13.95□□□□□ -0.18
RTN3-203ENST00000341307 PROSER3Q2NL68 480 aa13.95□□□□□ -0.18
RTN3-203ENST00000341307 HSP90AB3PQ58FF7 597 aa13.95□□□□□ -0.18
RTN3-203ENST00000341307 ZNF772Q68DY9 489 aaPredicted RBP13.95□□□□□ -0.18
RTN3-203ENST00000341307 CCDC186Q7Z3E2 898 aa13.95□□□□□ -0.18
RTN3-203ENST00000341307 KIF1CO43896 1103 aaKnown RBP13.94□□□□□ -0.18
RTN3-203ENST00000341307 GNAI2P04899 355 aa13.94□□□□□ -0.18
RTN3-203ENST00000341307 TPD52L1Q16890 204 aaPredicted RBP13.94□□□□□ -0.18
RTN3-203ENST00000341307 FAM182BQ5T319 152 aa13.94□□□□□ -0.18
RTN3-203ENST00000341307 TOM1L2Q6ZVM7 507 aa13.94□□□□□ -0.18
RTN3-203ENST00000341307 FBXO18Q8NFZ0 1043 aa13.94□□□□□ -0.18
RTN3-203ENST00000341307 RNF217Q8TC41 542 aa13.94□□□□□ -0.18
RTN3-203ENST00000341307 GJD4Q96KN9 370 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms