RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 YDJCA8MPS7 323 aa21.79■■□□□ 1.08
NECTIN1-202ENST00000340882 FAM155AB1AL88 458 aaPredicted RBP21.79■■□□□ 1.08
NECTIN1-202ENST00000340882 NOGQ13253 232 aa21.79■■□□□ 1.08
NECTIN1-202ENST00000340882 GIGYF2Q6Y7W6 1299 aaKnown RBP21.79■■□□□ 1.08
NECTIN1-202ENST00000340882 NLRP3Q96P20 1036 aa21.79■■□□□ 1.08
NECTIN1-202ENST00000340882 BCL2L13Q9BXK5 485 aa21.79■■□□□ 1.08
NECTIN1-202ENST00000340882 CNOT7Q9UIV1 285 aaKnown RBP21.79■■□□□ 1.08
NECTIN1-202ENST00000340882 NUDCQ9Y266 331 aa21.79■■□□□ 1.08
NECTIN1-202ENST00000340882 DUOX1Q9NRD9 1551 aa21.78■■□□□ 1.08
NECTIN1-202ENST00000340882 HUNKP57058 714 aa21.78■■□□□ 1.08
NECTIN1-202ENST00000340882 KIAA2012Q0VF49 1180 aa21.78■■□□□ 1.08
NECTIN1-202ENST00000340882 SLC10A5Q5PT55 438 aa21.77■■□□□ 1.08
NECTIN1-202ENST00000340882 DPP8Q6V1X1 898 aaPredicted RBP21.77■■□□□ 1.08
NECTIN1-202ENST00000340882 THUMPD2Q9BTF0 503 aaKnown RBP21.77■■□□□ 1.08
NECTIN1-202ENST00000340882 CDHR2Q9BYE9 1310 aa21.77■■□□□ 1.07
NECTIN1-202ENST00000340882 LRP10Q7Z4F1 713 aa21.76■■□□□ 1.07
NECTIN1-202ENST00000340882 PPP1R42Q7Z4L9 355 aa21.76■■□□□ 1.07
NECTIN1-202ENST00000340882 SP8Q8IXZ3 490 aa21.76■■□□□ 1.07
NECTIN1-202ENST00000340882 MPNDQ8N594 471 aa21.76■■□□□ 1.07
NECTIN1-202ENST00000340882 SUPT20HQ8NEM7 779 aa21.76■■□□□ 1.07
NECTIN1-202ENST00000340882 ZBTB12Q9Y330 459 aaPredicted RBP21.76■■□□□ 1.07
NECTIN1-202ENST00000340882 EGFRP00533 1210 aa21.75■■□□□ 1.07
NECTIN1-202ENST00000340882 PPP2R1AP30153 589 aa21.75■■□□□ 1.07
NECTIN1-202ENST00000340882 TNIP1Q15025 636 aa21.75■■□□□ 1.07
NECTIN1-202ENST00000340882 SAMD7Q7Z3H4 446 aa21.75■■□□□ 1.07
NECTIN1-202ENST00000340882 MICALL2Q8IY33 904 aa21.75■■□□□ 1.07
NECTIN1-202ENST00000340882 TMX4Q9H1E5 349 aaPredicted RBP21.75■■□□□ 1.07
NECTIN1-202ENST00000340882 UTP14AQ9BVJ6 771 aaKnown RBP21.74■■□□□ 1.07
NECTIN1-202ENST00000340882 LRRC37AA6NMS7 1700 aa21.73■■□□□ 1.07
NECTIN1-202ENST00000340882 HCLS1P14317 486 aaPredicted RBP21.73■■□□□ 1.07
NECTIN1-202ENST00000340882 KIF23Q02241 960 aaPredicted RBP21.73■■□□□ 1.07
NECTIN1-202ENST00000340882 PARP10Q53GL7 1025 aa21.73■■□□□ 1.07
NECTIN1-202ENST00000340882 RGMBQ6NW40 437 aa21.73■■□□□ 1.07
NECTIN1-202ENST00000340882 BBOX1O75936 387 aa21.72■■□□□ 1.07
NECTIN1-202ENST00000340882 PDIA6Q15084 440 aa21.72■■□□□ 1.07
NECTIN1-202ENST00000340882 PNISRQ8TF01 805 aaKnown RBP21.72■■□□□ 1.07
NECTIN1-202ENST00000340882 RNF186Q9NXI6 227 aa21.72■■□□□ 1.07
NECTIN1-202ENST00000340882 COL4A1P02462 1669 aa21.72■■□□□ 1.07
NECTIN1-202ENST00000340882 ADM5C9JUS6 153 aa21.71■■□□□ 1.07
NECTIN1-202ENST00000340882 H7C1D1 291 aa21.71■■□□□ 1.07
NECTIN1-202ENST00000340882 TRPA1O75762 1119 aa21.71■■□□□ 1.07
NECTIN1-202ENST00000340882 ANXA1P04083 346 aa21.71■■□□□ 1.07
NECTIN1-202ENST00000340882 PROSER3Q2NL68 480 aa21.71■■□□□ 1.07
NECTIN1-202ENST00000340882 TBC1D10BQ4KMP7 808 aaPredicted RBP21.71■■□□□ 1.07
NECTIN1-202ENST00000340882 GBA2Q9HCG7 927 aaPredicted RBP21.71■■□□□ 1.07
NECTIN1-202ENST00000340882 PSMD14O00487 310 aa21.7■■□□□ 1.06
NECTIN1-202ENST00000340882 KRT26Q7Z3Y9 468 aa21.7■■□□□ 1.06
NECTIN1-202ENST00000340882 SAGE1Q9NXZ1 904 aa21.7■■□□□ 1.06
NECTIN1-202ENST00000340882 DDX60Q8IY21 1712 aaKnown RBP21.69■■□□□ 1.06
NECTIN1-202ENST00000340882 ZNF428Q96B54 188 aa21.69■■□□□ 1.06
NECTIN1-202ENST00000340882 KCNQ5Q9NR82 932 aa21.69■■□□□ 1.06
NECTIN1-202ENST00000340882 SCN9AQ15858 1988 aa21.68■■□□□ 1.06
NECTIN1-202ENST00000340882 GRAPQ13588 217 aa21.68■■□□□ 1.06
NECTIN1-202ENST00000340882 GRAPLQ8TC17 118 aaPredicted RBP21.68■■□□□ 1.06
NECTIN1-202ENST00000340882 DPF2Q92785 391 aa21.68■■□□□ 1.06
NECTIN1-202ENST00000340882 DBNDD1Q9H9R9 158 aa21.68■■□□□ 1.06
NECTIN1-202ENST00000340882 ERBB4Q15303 1308 aa21.67■■□□□ 1.06
NECTIN1-202ENST00000340882 ZNF157P51786 506 aaPredicted RBP21.67■■□□□ 1.06
NECTIN1-202ENST00000340882 RBM26Q5T8P6 1007 aaKnown RBP21.67■■□□□ 1.06
NECTIN1-202ENST00000340882 NLRP10Q86W26 655 aa21.67■■□□□ 1.06
NECTIN1-202ENST00000340882 C2orf69Q8N8R5 385 aa21.67■■□□□ 1.06
NECTIN1-202ENST00000340882 CCER1Q8TC90 406 aaPredicted RBP21.67■■□□□ 1.06
NECTIN1-202ENST00000340882 CSRNP1Q96S65 589 aa21.67■■□□□ 1.06
NECTIN1-202ENST00000340882 ASTN2O75129 1339 aaPredicted RBP21.66■■□□□ 1.06
NECTIN1-202ENST00000340882 EIF2S2P20042 333 aaKnown RBP21.66■■□□□ 1.06
NECTIN1-202ENST00000340882 DDX46Q7L014 1031 aaKnown RBP21.66■■□□□ 1.06
NECTIN1-202ENST00000340882 CCDC102AQ96A19 550 aa21.66■■□□□ 1.06
NECTIN1-202ENST00000340882 PLEKHF1Q96S99 279 aa21.66■■□□□ 1.06
NECTIN1-202ENST00000340882 RTL9Q8NET4 1388 aa21.64■■□□□ 1.06
NECTIN1-202ENST00000340882 RIMBP2O15034 1052 aa21.64■■□□□ 1.05
NECTIN1-202ENST00000340882 SLC10A3P09131 477 aa21.64■■□□□ 1.05
NECTIN1-202ENST00000340882 PRPF38BQ5VTL8 546 aaKnown RBP21.64■■□□□ 1.05
NECTIN1-202ENST00000340882 NFE2L2Q16236 605 aa21.63■■□□□ 1.05
NECTIN1-202ENST00000340882 WASHC4Q2M389 1173 aa21.63■■□□□ 1.05
NECTIN1-202ENST00000340882 CTU1Q7Z7A3 348 aaKnown RBP21.63■■□□□ 1.05
NECTIN1-202ENST00000340882 DCPSQ96C86 337 aaKnown RBP21.63■■□□□ 1.05
NECTIN1-202ENST00000340882 TRMT112Q9UI30 125 aaKnown RBP21.63■■□□□ 1.05
NECTIN1-202ENST00000340882 AIMP1Q12904 312 aaKnown RBP21.62■■□□□ 1.05
NECTIN1-202ENST00000340882 DOK7Q18PE1 504 aa21.62■■□□□ 1.05
NECTIN1-202ENST00000340882 COPS6Q7L5N1 327 aa21.62■■□□□ 1.05
NECTIN1-202ENST00000340882 NECTIN2Q92692 538 aa21.62■■□□□ 1.05
NECTIN1-202ENST00000340882 CELF1Q92879 486 aaKnown RBP21.62■■□□□ 1.05
NECTIN1-202ENST00000340882 POLLQ9UGP5 575 aa21.62■■□□□ 1.05
NECTIN1-202ENST00000340882 XAGE3Q8WTP9 111 aa21.61■■□□□ 1.05
NECTIN1-202ENST00000340882 NSFL1CQ9UNZ2 370 aaKnown RBP21.61■■□□□ 1.05
NECTIN1-202ENST00000340882 HPS5Q9UPZ3 1129 aa21.61■■□□□ 1.05
NECTIN1-202ENST00000340882 SH3TC1Q8TE82 1336 aa21.6■■□□□ 1.05
NECTIN1-202ENST00000340882 ECE2O60344 883 aa21.6■■□□□ 1.05
NECTIN1-202ENST00000340882 GPSM2P81274 684 aa21.6■■□□□ 1.05
NECTIN1-202ENST00000340882 TCIRG1Q13488 830 aa21.6■■□□□ 1.05
NECTIN1-202ENST00000340882 GGA3Q9NZ52 723 aa21.6■■□□□ 1.05
NECTIN1-202ENST00000340882 TSPYL4Q9UJ04 414 aa21.6■■□□□ 1.05
NECTIN1-202ENST00000340882 KIF4BQ2VIQ3 1234 aa21.59■■□□□ 1.05
NECTIN1-202ENST00000340882 RASAL3Q86YV0 1011 aa21.59■■□□□ 1.05
NECTIN1-202ENST00000340882 CDCA5Q96FF9 252 aa21.59■■□□□ 1.05
NECTIN1-202ENST00000340882 C6orf229H3BNL8 230 aa21.58■■□□□ 1.05
NECTIN1-202ENST00000340882 RPS12P25398 132 aaKnown RBP21.58■■□□□ 1.05
NECTIN1-202ENST00000340882 HSP90AB3PQ58FF7 597 aa21.57■■□□□ 1.04
NECTIN1-202ENST00000340882 TMC4Q7Z404 712 aa21.57■■□□□ 1.04
NECTIN1-202ENST00000340882 PSME4Q14997 1843 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms