RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 DDX21Q9NR30 783 aaKnown RBP eCLIP22.4■■□□□ 1.18
CDK13-202ENST00000340829 CCDC194A0A1B0GVG4 234 aa22.4■■□□□ 1.18
CDK13-202ENST00000340829 UVSSAQ2YD98 709 aa22.4■■□□□ 1.18
CDK13-202ENST00000340829 AXDND1Q5T1B0 1012 aaPredicted RBP22.4■■□□□ 1.18
CDK13-202ENST00000340829 UBXN4Q92575 508 aa22.4■■□□□ 1.18
CDK13-202ENST00000340829 SLC9C2Q5TAH2 1124 aa22.39■■□□□ 1.18
CDK13-202ENST00000340829 RPGRQ92834 1020 aaKnown RBP22.39■■□□□ 1.18
CDK13-202ENST00000340829 PRIM1P49642 420 aaKnown RBP22.39■■□□□ 1.18
CDK13-202ENST00000340829 CRACR2BQ8N4Y2 399 aaPredicted RBP22.39■■□□□ 1.18
CDK13-202ENST00000340829 CCDC152Q4G0S7 254 aa22.39■■□□□ 1.17
CDK13-202ENST00000340829 CHST3Q7LGC8 479 aa22.39■■□□□ 1.17
CDK13-202ENST00000340829 KDM5CP41229 1560 aa22.39■■□□□ 1.17
CDK13-202ENST00000340829 IL2RBP14784 551 aa22.38■■□□□ 1.17
CDK13-202ENST00000340829 DACT1Q9NYF0 836 aa22.38■■□□□ 1.17
CDK13-202ENST00000340829 USP19O94966 1318 aa22.38■■□□□ 1.17
CDK13-202ENST00000340829 TNNT1P13805 278 aa22.38■■□□□ 1.17
CDK13-202ENST00000340829 TMC6Q7Z403 805 aa22.38■■□□□ 1.17
CDK13-202ENST00000340829 KIF18AQ8NI77 898 aa22.38■■□□□ 1.17
CDK13-202ENST00000340829 TSPY2A6NKD2 308 aa22.38■■□□□ 1.17
CDK13-202ENST00000340829 TMEM132AQ24JP5 1023 aa22.38■■□□□ 1.17
CDK13-202ENST00000340829 KIAA1328Q86T90 577 aa22.38■■□□□ 1.17
CDK13-202ENST00000340829 PNMA6EA0A0J9YXQ4 647 aa22.37■■□□□ 1.17
CDK13-202ENST00000340829 ORAI2Q96SN7 254 aa22.37■■□□□ 1.17
CDK13-202ENST00000340829 KDM5AP29375 1690 aaKnown RBP22.37■■□□□ 1.17
CDK13-202ENST00000340829 RRP9O43818 475 aaKnown RBP22.37■■□□□ 1.17
CDK13-202ENST00000340829 CPLX3Q8WVH0 158 aa22.37■■□□□ 1.17
CDK13-202ENST00000340829 ZNF830Q96NB3 372 aaPredicted RBP22.37■■□□□ 1.17
CDK13-202ENST00000340829 KIF2AO00139 706 aaPredicted RBP22.37■■□□□ 1.17
CDK13-202ENST00000340829 ZBTB43O43298 467 aa22.37■■□□□ 1.17
CDK13-202ENST00000340829 ABCA8O94911 1581 aa22.37■■□□□ 1.17
CDK13-202ENST00000340829 SAMD9LQ8IVG5 1584 aa22.37■■□□□ 1.17
CDK13-202ENST00000340829 ZSCAN12O43309 604 aa22.37■■□□□ 1.17
CDK13-202ENST00000340829 ERLIN1O75477 346 aa22.36■■□□□ 1.17
CDK13-202ENST00000340829 ALG1Q9BT22 464 aa22.36■■□□□ 1.17
CDK13-202ENST00000340829 C6orf229H3BNL8 230 aa22.36■■□□□ 1.17
CDK13-202ENST00000340829 WTAPQ15007 396 aa22.36■■□□□ 1.17
CDK13-202ENST00000340829 ATP6V1AP38606 617 aa22.36■■□□□ 1.17
CDK13-202ENST00000340829 ANO6Q4KMQ2 910 aa22.35■■□□□ 1.17
CDK13-202ENST00000340829 KLHDC4Q8TBB5 520 aa22.35■■□□□ 1.17
CDK13-202ENST00000340829 URI1O94763 535 aaPredicted RBP22.35■■□□□ 1.17
CDK13-202ENST00000340829 CYP7A1P22680 504 aa22.35■■□□□ 1.17
CDK13-202ENST00000340829 CCDC96Q2M329 555 aa22.35■■□□□ 1.17
CDK13-202ENST00000340829 ZNF790Q6PG37 636 aa22.35■■□□□ 1.17
CDK13-202ENST00000340829 INTS4Q96HW7 963 aaKnown RBP22.35■■□□□ 1.17
CDK13-202ENST00000340829 SLC4A4Q9Y6R1 1079 aa22.35■■□□□ 1.17
CDK13-202ENST00000340829 PRC1O43663 620 aa22.34■■□□□ 1.17
CDK13-202ENST00000340829 CCDC102BQ68D86 513 aa22.34■■□□□ 1.17
CDK13-202ENST00000340829 RUFY3Q7L099 469 aa22.34■■□□□ 1.17
CDK13-202ENST00000340829 HELBQ8NG08 1087 aaPredicted RBP22.34■■□□□ 1.17
CDK13-202ENST00000340829 TMOD2Q9NZR1 351 aa22.34■■□□□ 1.17
CDK13-202ENST00000340829 APOBRQ0VD83 1088 aa22.34■■□□□ 1.17
CDK13-202ENST00000340829 MYO5CQ9NQX4 1742 aa22.34■■□□□ 1.17
CDK13-202ENST00000340829 CCDC171Q6TFL3 1326 aa22.34■■□□□ 1.17
CDK13-202ENST00000340829 RNF113AO15541 343 aaKnown RBP22.34■■□□□ 1.17
CDK13-202ENST00000340829 NBPF7P0C2Y1 421 aaPredicted RBP22.34■■□□□ 1.17
CDK13-202ENST00000340829 PDE4BQ07343 736 aa22.34■■□□□ 1.17
CDK13-202ENST00000340829 PDCL3Q9H2J4 239 aa22.34■■□□□ 1.17
CDK13-202ENST00000340829 PLXNC1O60486 1568 aa22.34■■□□□ 1.17
CDK13-202ENST00000340829 TXLNBQ8N3L3 684 aa22.33■■□□□ 1.17
CDK13-202ENST00000340829 SIRT1Q96EB6 747 aa22.33■■□□□ 1.17
CDK13-202ENST00000340829 SF3B2Q13435 895 aaKnown RBP22.33■■□□□ 1.17
CDK13-202ENST00000340829 NBPF6Q5VWK0 638 aa22.33■■□□□ 1.17
CDK13-202ENST00000340829 NBPF5PQ86XG9 351 aaPredicted RBP22.33■■□□□ 1.17
CDK13-202ENST00000340829 NBPF4Q96M43 638 aa22.33■■□□□ 1.17
CDK13-202ENST00000340829 MYO6Q9UM54 1294 aa22.33■■□□□ 1.17
CDK13-202ENST00000340829 SBNO2Q9Y2G9 1366 aa22.33■■□□□ 1.17
CDK13-202ENST00000340829 SYKP43405 635 aa22.33■■□□□ 1.16
CDK13-202ENST00000340829 VAT1LQ9HCJ6 419 aa22.33■■□□□ 1.16
CDK13-202ENST00000340829 SEPT11Q9NVA2 429 aaKnown RBP22.33■■□□□ 1.16
CDK13-202ENST00000340829 BABAM1Q9NWV8 329 aa22.33■■□□□ 1.16
CDK13-202ENST00000340829 ANKRD18AQ8IVF6 992 aa22.32■■□□□ 1.16
CDK13-202ENST00000340829 KAT14Q9H8E8 782 aa22.32■■□□□ 1.16
CDK13-202ENST00000340829 ERVK-7P63135 1459 aa22.32■■□□□ 1.16
CDK13-202ENST00000340829 NIP7Q9Y221 180 aaKnown RBP eCLIP22.32■■□□□ 1.16
CDK13-202ENST00000340829 NEMFO60524 1076 aa22.32■■□□□ 1.16
CDK13-202ENST00000340829 CAVIN2O95810 425 aa22.32■■□□□ 1.16
CDK13-202ENST00000340829 KIF5BP33176 963 aa22.32■■□□□ 1.16
CDK13-202ENST00000340829 DZIP3Q86Y13 1208 aaKnown RBP22.32■■□□□ 1.16
CDK13-202ENST00000340829 FAM200AQ8TCP9 573 aa22.32■■□□□ 1.16
CDK13-202ENST00000340829 HSPA2P54652 639 aa22.32■■□□□ 1.16
CDK13-202ENST00000340829 GSDMDP57764 484 aa22.32■■□□□ 1.16
CDK13-202ENST00000340829 KRT23Q9C075 422 aa22.32■■□□□ 1.16
CDK13-202ENST00000340829 SYT1P21579 422 aa22.31■■□□□ 1.16
CDK13-202ENST00000340829 ZNF397Q8NF99 534 aaPredicted RBP22.31■■□□□ 1.16
CDK13-202ENST00000340829 UGGT1Q9NYU2 1555 aa22.31■■□□□ 1.16
CDK13-202ENST00000340829 TMX1Q9H3N1 280 aa22.31■■□□□ 1.16
CDK13-202ENST00000340829 CWC15Q9P013 229 aaKnown RBP22.31■■□□□ 1.16
CDK13-202ENST00000340829 ZNF219Q9P2Y4 722 aaPredicted RBP22.31■■□□□ 1.16
CDK13-202ENST00000340829 MRPS27Q92552 414 aaKnown RBP22.31■■□□□ 1.16
CDK13-202ENST00000340829 CCDC66A2RUB6 948 aa22.31■■□□□ 1.16
CDK13-202ENST00000340829 MARCKSP29966 332 aaPredicted RBP22.31■■□□□ 1.16
CDK13-202ENST00000340829 DNAJC25Q9H1X3 360 aa22.31■■□□□ 1.16
CDK13-202ENST00000340829 PLEKHG3A1L390 1219 aa22.3■■□□□ 1.16
CDK13-202ENST00000340829 KCNG4Q8TDN1 519 aa22.3■■□□□ 1.16
CDK13-202ENST00000340829 RAD50Q92878 1312 aa22.3■■□□□ 1.16
CDK13-202ENST00000340829 BAG3O95817 575 aa22.3■■□□□ 1.16
CDK13-202ENST00000340829 LDHCP07864 332 aa22.3■■□□□ 1.16
CDK13-202ENST00000340829 TIMM10P62072 90 aa22.3■■□□□ 1.16
CDK13-202ENST00000340829 CRNKL1Q9BZJ0 848 aaKnown RBP22.3■■□□□ 1.16
CDK13-202ENST00000340829 IRS4O14654 1257 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms