RNA–Protein interactions for RNA: ENST00000340170.8

HIRA-202, Transcript of histone cell cycle regulator, humanhuman

TSL 1 (best) BASIC

Gene HIRA, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIRA-202ENST00000340170 LETM1O95202 739 aaPredicted RBP26.49■■□□□ 1.83
HIRA-202ENST00000340170 DDX46Q7L014 1031 aaKnown RBP26.48■■□□□ 1.83
HIRA-202ENST00000340170 NEUROD6Q96NK8 337 aa26.48■■□□□ 1.83
HIRA-202ENST00000340170 ZSWIM6Q9HCJ5 1215 aa26.48■■□□□ 1.83
HIRA-202ENST00000340170 SPATA32Q96LK8 384 aa26.48■■□□□ 1.83
HIRA-202ENST00000340170 H3BQV1 296 aa26.47■■□□□ 1.83
HIRA-202ENST00000340170 IFFO2Q5TF58 517 aa26.47■■□□□ 1.83
HIRA-202ENST00000340170 NFATC2IPQ8NCF5 419 aa26.47■■□□□ 1.83
HIRA-202ENST00000340170 AXIN2Q9Y2T1 843 aa26.47■■□□□ 1.83
HIRA-202ENST00000340170 EPHA10Q5JZY3 1008 aa26.47■■□□□ 1.83
HIRA-202ENST00000340170 ERICH4A6NGS2 130 aa26.47■■□□□ 1.83
HIRA-202ENST00000340170 UBE3BQ7Z3V4 1068 aa26.47■■□□□ 1.83
HIRA-202ENST00000340170 ZSCAN31Q96LW9 406 aaPredicted RBP26.47■■□□□ 1.83
HIRA-202ENST00000340170 CBX8Q9HC52 389 aa26.47■■□□□ 1.83
HIRA-202ENST00000340170 DIP2AQ14689 1571 aa26.47■■□□□ 1.83
HIRA-202ENST00000340170 ZBTB22O15209 634 aa26.46■■□□□ 1.83
HIRA-202ENST00000340170 NECTIN1Q15223 517 aa26.46■■□□□ 1.83
HIRA-202ENST00000340170 TRHP20396 242 aaPredicted RBP26.46■■□□□ 1.83
HIRA-202ENST00000340170 RNF20Q5VTR2 975 aa26.46■■□□□ 1.83
HIRA-202ENST00000340170 SH2B1Q9NRF2 756 aaPredicted RBP26.46■■□□□ 1.83
HIRA-202ENST00000340170 TRERF1Q96PN7 1200 aa26.46■■□□□ 1.83
HIRA-202ENST00000340170 LINS1Q8NG48 757 aa26.45■■□□□ 1.83
HIRA-202ENST00000340170 DDX17Q92841 729 aaKnown RBP26.45■■□□□ 1.83
HIRA-202ENST00000340170 PSMA5P28066 241 aa26.45■■□□□ 1.82
HIRA-202ENST00000340170 GUCY1B3Q02153 619 aa26.45■■□□□ 1.82
HIRA-202ENST00000340170 KAZALD1Q96I82 304 aa26.45■■□□□ 1.82
HIRA-202ENST00000340170 FAM200AQ8TCP9 573 aa26.44■■□□□ 1.82
HIRA-202ENST00000340170 BABAM1Q9NWV8 329 aa26.44■■□□□ 1.82
HIRA-202ENST00000340170 CLIP2Q9UDT6 1046 aa26.44■■□□□ 1.82
HIRA-202ENST00000340170 MRVI1Q9Y6F6 885 aa26.44■■□□□ 1.82
HIRA-202ENST00000340170 ZNF165P49910 485 aa26.44■■□□□ 1.82
HIRA-202ENST00000340170 RGPD1P0DJD0 1748 aa26.43■■□□□ 1.82
HIRA-202ENST00000340170 FMNL2Q96PY5 1086 aa26.43■■□□□ 1.82
HIRA-202ENST00000340170 CCDC112Q8NEF3 446 aa26.43■■□□□ 1.82
HIRA-202ENST00000340170 CHST3Q7LGC8 479 aa26.43■■□□□ 1.82
HIRA-202ENST00000340170 RAPGEF4Q8WZA2 1011 aa26.43■■□□□ 1.82
HIRA-202ENST00000340170 NR1I2O75469 434 aa26.42■■□□□ 1.82
HIRA-202ENST00000340170 ALDH1L1O75891 902 aa26.42■■□□□ 1.82
HIRA-202ENST00000340170 TFCP2Q12800 502 aa26.42■■□□□ 1.82
HIRA-202ENST00000340170 UBR1Q8IWV7 1749 aa26.42■■□□□ 1.82
HIRA-202ENST00000340170 IGKV5-2P06315 115 aa26.42■■□□□ 1.82
HIRA-202ENST00000340170 KCNH5Q8NCM2 988 aa26.42■■□□□ 1.82
HIRA-202ENST00000340170 SPTLC3Q9NUV7 552 aa26.42■■□□□ 1.82
HIRA-202ENST00000340170 CHMP4AQ9BY43 222 aa26.41■■□□□ 1.82
HIRA-202ENST00000340170 FTOQ9C0B1 505 aaKnown RBP eCLIP26.41■■□□□ 1.826e-8■■□□□ 13.9
HIRA-202ENST00000340170 CEMIPQ8WUJ3 1361 aa26.41■■□□□ 1.82
HIRA-202ENST00000340170 CCT2P78371 535 aaKnown RBP26.41■■□□□ 1.82
HIRA-202ENST00000340170 CABLES1Q8TDN4 633 aa26.41■■□□□ 1.82
HIRA-202ENST00000340170 CCDC85AQ96PX6 553 aaPredicted RBP26.41■■□□□ 1.82
HIRA-202ENST00000340170 MAP4K1Q92918 833 aa26.41■■□□□ 1.82
HIRA-202ENST00000340170 PIK3C2AO00443 1686 aa26.4■■□□□ 1.82
HIRA-202ENST00000340170 GOLGA6L19H0YKK7 550 aa26.4■■□□□ 1.82
HIRA-202ENST00000340170 NCBP1Q09161 790 aaKnown RBP26.4■■□□□ 1.82
HIRA-202ENST00000340170 AMOTQ4VCS5 1084 aa26.4■■□□□ 1.82
HIRA-202ENST00000340170 USP16Q9Y5T5 823 aa26.4■■□□□ 1.82
HIRA-202ENST00000340170 TMEM87AQ8NBN3 555 aa26.4■■□□□ 1.82
HIRA-202ENST00000340170 CACTINQ8WUQ7 758 aaKnown RBP26.4■■□□□ 1.82
HIRA-202ENST00000340170 BRF1Q92994 677 aa26.4■■□□□ 1.82
HIRA-202ENST00000340170 FUCA2Q9BTY2 467 aa26.4■■□□□ 1.82
HIRA-202ENST00000340170 USP27XA6NNY8 438 aa26.39■■□□□ 1.82
HIRA-202ENST00000340170 CHRNA2Q15822 529 aa26.39■■□□□ 1.82
HIRA-202ENST00000340170 GORABQ5T7V8 394 aa26.39■■□□□ 1.82
HIRA-202ENST00000340170 DBNDD2Q9BQY9 259 aa26.39■■□□□ 1.81
HIRA-202ENST00000340170 CCDC144BQ3MJ40 725 aa26.38■■□□□ 1.81
HIRA-202ENST00000340170 CCDC144CPQ8IYA2 1237 aa26.38■■□□□ 1.81
HIRA-202ENST00000340170 HOXB7P09629 217 aa26.38■■□□□ 1.81
HIRA-202ENST00000340170 Q6ZUG5 572 aa26.38■■□□□ 1.81
HIRA-202ENST00000340170 RAB11FIP4Q86YS3 637 aa26.38■■□□□ 1.81
HIRA-202ENST00000340170 TTC5Q8N0Z6 440 aa26.38■■□□□ 1.81
HIRA-202ENST00000340170 DDX21Q9NR30 783 aaKnown RBP eCLIP26.38■■□□□ 1.81
HIRA-202ENST00000340170 HDAC5Q9UQL6 1122 aa26.38■■□□□ 1.81
HIRA-202ENST00000340170 BECN2A8MW95 431 aa26.37■■□□□ 1.81
HIRA-202ENST00000340170 RPS6KB1P23443 525 aa26.37■■□□□ 1.81
HIRA-202ENST00000340170 ZNF496Q96IT1 587 aaPredicted RBP26.37■■□□□ 1.81
HIRA-202ENST00000340170 PDCP20941 246 aa26.37■■□□□ 1.81
HIRA-202ENST00000340170 ZSCAN25Q6NSZ9 544 aa26.37■■□□□ 1.81
HIRA-202ENST00000340170 XRN1Q8IZH2 1706 aaKnown RBP26.36■■□□□ 1.81
HIRA-202ENST00000340170 A0A087WZG4 1122 aa26.36■■□□□ 1.81
HIRA-202ENST00000340170 DBNLQ9UJU6 430 aaKnown RBP26.36■■□□□ 1.81
HIRA-202ENST00000340170 ZNF790Q6PG37 636 aa26.36■■□□□ 1.81
HIRA-202ENST00000340170 PXDNQ92626 1479 aa26.36■■□□□ 1.81
HIRA-202ENST00000340170 FMN2Q9NZ56 1722 aa26.35■■□□□ 1.81
HIRA-202ENST00000340170 HIP1O00291 1037 aa26.35■■□□□ 1.81
HIRA-202ENST00000340170 TOB2Q14106 344 aaPredicted RBP26.35■■□□□ 1.81
HIRA-202ENST00000340170 ANKLE2Q86XL3 938 aa26.35■■□□□ 1.81
HIRA-202ENST00000340170 ST7Q9NRC1 585 aa26.35■■□□□ 1.81
HIRA-202ENST00000340170 FAM208AQ9UK61 1670 aaKnown RBP26.35■■□□□ 1.81
HIRA-202ENST00000340170 NEURL1BA8MQ27 555 aa26.35■■□□□ 1.81
HIRA-202ENST00000340170 MTX1Q13505 466 aa26.35■■□□□ 1.81
HIRA-202ENST00000340170 GOLIM4O00461 696 aa26.34■■□□□ 1.81
HIRA-202ENST00000340170 ANKRD13DQ6ZTN6 518 aa26.34■■□□□ 1.81
HIRA-202ENST00000340170 NEK1Q96PY6 1258 aa26.34■■□□□ 1.81
HIRA-202ENST00000340170 NCOA5Q9HCD5 579 aaKnown RBP26.34■■□□□ 1.81
HIRA-202ENST00000340170 GTF2F1P35269 517 aaKnown RBP eCLIP26.34■■□□□ 1.819e-7■■■■■ 34.6
HIRA-202ENST00000340170 GCKRQ14397 625 aa26.34■■□□□ 1.81
HIRA-202ENST00000340170 ISM2Q6H9L7 571 aa26.34■■□□□ 1.81
HIRA-202ENST00000340170 TM6SF1Q9BZW5 370 aa26.34■■□□□ 1.81
HIRA-202ENST00000340170 EPB41L2O43491 1005 aaKnown RBP26.33■■□□□ 1.81
HIRA-202ENST00000340170 ZNF75DP51815 510 aa26.33■■□□□ 1.81
HIRA-202ENST00000340170 TIMM10P62072 90 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms