RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 CATIPQ7Z7H3 387 aa18.62■□□□□ 0.57
CCNY-202ENST00000339497 DDX17Q92841 729 aaKnown RBP18.62■□□□□ 0.57
CCNY-202ENST00000339497 DEF6Q9H4E7 631 aa18.62■□□□□ 0.57
CCNY-202ENST00000339497 ZNF287Q9HBT7 754 aa18.62■□□□□ 0.57
CCNY-202ENST00000339497 SIRT1Q96EB6 747 aa18.62■□□□□ 0.57
CCNY-202ENST00000339497 NEO1Q92859 1461 aa18.62■□□□□ 0.57
CCNY-202ENST00000339497 C6orf229H3BNL8 230 aa18.61■□□□□ 0.57
CCNY-202ENST00000339497 PRIM1P49642 420 aaKnown RBP18.61■□□□□ 0.57
CCNY-202ENST00000339497 DTNBO60941 627 aa18.61■□□□□ 0.57
CCNY-202ENST00000339497 PLEKHF1Q96S99 279 aa18.61■□□□□ 0.57
CCNY-202ENST00000339497 ZNF521Q96K83 1311 aa18.61■□□□□ 0.57
CCNY-202ENST00000339497 NLRP5P59047 1200 aa18.61■□□□□ 0.57
CCNY-202ENST00000339497 CCDC152Q4G0S7 254 aa18.61■□□□□ 0.57
CCNY-202ENST00000339497 ACBD3Q9H3P7 528 aa18.61■□□□□ 0.57
CCNY-202ENST00000339497 ZSCAN16Q9H4T2 348 aaPredicted RBP18.61■□□□□ 0.57
CCNY-202ENST00000339497 BMP2KQ9NSY1 1161 aaPredicted RBP18.61■□□□□ 0.57
CCNY-202ENST00000339497 DACT1Q9NYF0 836 aa18.61■□□□□ 0.57
CCNY-202ENST00000339497 IL17REQ8NFR9 667 aa18.6■□□□□ 0.57
CCNY-202ENST00000339497 RPGRQ92834 1020 aaKnown RBP18.6■□□□□ 0.57
CCNY-202ENST00000339497 NIP7Q9Y221 180 aaKnown RBP eCLIP18.6■□□□□ 0.57
CCNY-202ENST00000339497 FAM89AQ96GI7 184 aa18.6■□□□□ 0.57
CCNY-202ENST00000339497 SEC63Q9UGP8 760 aaKnown RBP18.6■□□□□ 0.57
CCNY-202ENST00000339497 TSPY2A6NKD2 308 aa18.59■□□□□ 0.57
CCNY-202ENST00000339497 BABAM1Q9NWV8 329 aa18.59■□□□□ 0.57
CCNY-202ENST00000339497 TRMT1Q9NXH9 659 aaKnown RBP18.59■□□□□ 0.57
CCNY-202ENST00000339497 METP08581 1390 aa18.59■□□□□ 0.57
CCNY-202ENST00000339497 PTPN14Q15678 1187 aa18.59■□□□□ 0.57
CCNY-202ENST00000339497 NBPF5PQ86XG9 351 aaPredicted RBP18.59■□□□□ 0.57
CCNY-202ENST00000339497 DZIP3Q86Y13 1208 aaKnown RBP18.59■□□□□ 0.57
CCNY-202ENST00000339497 KCNQ3O43525 872 aa18.59■□□□□ 0.57
CCNY-202ENST00000339497 CYP7A1P22680 504 aa18.59■□□□□ 0.57
CCNY-202ENST00000339497 EIF5P55010 431 aaKnown RBP18.59■□□□□ 0.57
CCNY-202ENST00000339497 DDB1Q16531 1140 aa18.59■□□□□ 0.57
CCNY-202ENST00000339497 CCDC171Q6TFL3 1326 aa18.59■□□□□ 0.57
CCNY-202ENST00000339497 ZBTB43O43298 467 aa18.59■□□□□ 0.57
CCNY-202ENST00000339497 HOXB7P09629 217 aa18.59■□□□□ 0.57
CCNY-202ENST00000339497 KDM5AP29375 1690 aaKnown RBP18.58■□□□□ 0.57
CCNY-202ENST00000339497 NOM1Q5C9Z4 860 aaKnown RBP18.58■□□□□ 0.57
CCNY-202ENST00000339497 ZFYVE27Q5T4F4 411 aa18.58■□□□□ 0.57
CCNY-202ENST00000339497 CRACR2BQ8N4Y2 399 aaPredicted RBP18.58■□□□□ 0.57
CCNY-202ENST00000339497 CCDC194A0A1B0GVG4 234 aa18.58■□□□□ 0.56
CCNY-202ENST00000339497 C16orf45Q96MC5 204 aaPredicted RBP18.58■□□□□ 0.56
CCNY-202ENST00000339497 DBNDD2Q9BQY9 259 aa18.58■□□□□ 0.56
CCNY-202ENST00000339497 ZNF219Q9P2Y4 722 aaPredicted RBP18.58■□□□□ 0.56
CCNY-202ENST00000339497 SYT1P21579 422 aa18.58■□□□□ 0.56
CCNY-202ENST00000339497 EIF4A1P60842 406 aaKnown RBP18.58■□□□□ 0.56
CCNY-202ENST00000339497 ZNF496Q96IT1 587 aaPredicted RBP18.58■□□□□ 0.56
CCNY-202ENST00000339497 ZNF830Q96NB3 372 aaPredicted RBP18.58■□□□□ 0.56
CCNY-202ENST00000339497 IRS4O14654 1257 aaPredicted RBP18.58■□□□□ 0.56
CCNY-202ENST00000339497 APOBRQ0VD83 1088 aa18.58■□□□□ 0.56
CCNY-202ENST00000339497 ABCC4O15439 1325 aa18.57■□□□□ 0.56
CCNY-202ENST00000339497 A1BGP04217 495 aa18.57■□□□□ 0.56
CCNY-202ENST00000339497 STX1AQ16623 288 aa18.57■□□□□ 0.56
CCNY-202ENST00000339497 INTS4Q96HW7 963 aaKnown RBP18.57■□□□□ 0.56
CCNY-202ENST00000339497 ALG1Q9BT22 464 aa18.57■□□□□ 0.56
CCNY-202ENST00000339497 EPB41L2O43491 1005 aaKnown RBP18.57■□□□□ 0.56
CCNY-202ENST00000339497 PRC1O43663 620 aa18.57■□□□□ 0.56
CCNY-202ENST00000339497 TOP1P11387 765 aaKnown RBP18.57■□□□□ 0.56
CCNY-202ENST00000339497 ANKRD18AQ8IVF6 992 aa18.57■□□□□ 0.56
CCNY-202ENST00000339497 WTAPQ15007 396 aa18.57■□□□□ 0.56
CCNY-202ENST00000339497 METTL22Q9BUU2 404 aaPredicted RBP18.57■□□□□ 0.56
CCNY-202ENST00000339497 SLC4A4Q9Y6R1 1079 aa18.57■□□□□ 0.56
CCNY-202ENST00000339497 ARHGAP29Q52LW3 1261 aa18.56■□□□□ 0.56
CCNY-202ENST00000339497 CCDC129Q6ZRS4 1044 aa18.56■□□□□ 0.56
CCNY-202ENST00000339497 SUCLG2Q96I99 432 aa18.56■□□□□ 0.56
CCNY-202ENST00000339497 NDUFB9Q9Y6M9 179 aa18.56■□□□□ 0.56
CCNY-202ENST00000339497 RNF113AO15541 343 aaKnown RBP18.56■□□□□ 0.56
CCNY-202ENST00000339497 ZNF76P36508 570 aa18.56■□□□□ 0.56
CCNY-202ENST00000339497 RUFY3Q7L099 469 aa18.56■□□□□ 0.56
CCNY-202ENST00000339497 AK7Q96M32 723 aa18.56■□□□□ 0.56
CCNY-202ENST00000339497 FAM227BQ96M60 508 aa18.56■□□□□ 0.56
CCNY-202ENST00000339497 USP44Q9H0E7 712 aa18.56■□□□□ 0.56
CCNY-202ENST00000339497 VAT1LQ9HCJ6 419 aa18.56■□□□□ 0.56
CCNY-202ENST00000339497 CPLX3Q8WVH0 158 aa18.56■□□□□ 0.56
CCNY-202ENST00000339497 STX8Q9UNK0 236 aa18.56■□□□□ 0.56
CCNY-202ENST00000339497 RFC4P35249 363 aa18.55■□□□□ 0.56
CCNY-202ENST00000339497 SF3B2Q13435 895 aaKnown RBP18.55■□□□□ 0.56
CCNY-202ENST00000339497 PLXNC1O60486 1568 aa18.55■□□□□ 0.56
CCNY-202ENST00000339497 SGSM2O43147 1006 aa18.54■□□□□ 0.56
CCNY-202ENST00000339497 BTG4Q9NY30 223 aa18.54■□□□□ 0.56
CCNY-202ENST00000339497 KIAA0232Q92628 1395 aa18.54■□□□□ 0.56
CCNY-202ENST00000339497 GSPT1P15170 499 aaKnown RBP18.54■□□□□ 0.56
CCNY-202ENST00000339497 MARCKSP29966 332 aaPredicted RBP18.54■□□□□ 0.56
CCNY-202ENST00000339497 ODF2Q5BJF6 829 aa18.54■□□□□ 0.56
CCNY-202ENST00000339497 ZNF594Q96JF6 807 aaPredicted RBP18.54■□□□□ 0.56
CCNY-202ENST00000339497 CCDC96Q2M329 555 aa18.54■□□□□ 0.56
CCNY-202ENST00000339497 ANO6Q4KMQ2 910 aa18.54■□□□□ 0.56
CCNY-202ENST00000339497 CCDC102BQ68D86 513 aa18.54■□□□□ 0.56
CCNY-202ENST00000339497 DHX32Q7L7V1 743 aaKnown RBP18.54■□□□□ 0.56
CCNY-202ENST00000339497 SLC52A2Q9HAB3 445 aa18.54■□□□□ 0.56
CCNY-202ENST00000339497 PDE4BQ07343 736 aa18.54■□□□□ 0.56
CCNY-202ENST00000339497 TMC6Q7Z403 805 aa18.54■□□□□ 0.56
CCNY-202ENST00000339497 PLBD2Q8NHP8 589 aa18.54■□□□□ 0.56
CCNY-202ENST00000339497 TMOD2Q9NZR1 351 aa18.54■□□□□ 0.56
CCNY-202ENST00000339497 PCDH11XQ9BZA7 1347 aa18.53■□□□□ 0.56
CCNY-202ENST00000339497 PCDH11YQ9BZA8 1340 aa18.53■□□□□ 0.56
CCNY-202ENST00000339497 A0A1B0GUL7 405 aa18.53■□□□□ 0.56
CCNY-202ENST00000339497 UVSSAQ2YD98 709 aa18.53■□□□□ 0.56
CCNY-202ENST00000339497 TNNT1P13805 278 aa18.53■□□□□ 0.56
CCNY-202ENST00000339497 TNNI3KQ59H18 835 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms