RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 IQCA1Q86XH1 822 aa7.37□□□□□ -1.23
PRKDC-202ENST00000338368 LRRC2Q9BYS8 371 aa7.37□□□□□ -1.23
PRKDC-202ENST00000338368 ALKQ9UM73 1620 aa7.37□□□□□ -1.23
PRKDC-202ENST00000338368 GOLGA8AA7E2F4 631 aa7.37□□□□□ -1.23
PRKDC-202ENST00000338368 GOLGA8BA8MQT2 603 aa7.37□□□□□ -1.23
PRKDC-202ENST00000338368 RNF41Q9H4P4 317 aaPredicted RBP7.37□□□□□ -1.23
PRKDC-202ENST00000338368 TPM2P07951 284 aa7.37□□□□□ -1.23
PRKDC-202ENST00000338368 ERVV-2B6SEH9 535 aa7.37□□□□□ -1.23
PRKDC-202ENST00000338368 SLC12A7Q9Y666 1083 aa7.37□□□□□ -1.23
PRKDC-202ENST00000338368 SHROOM2Q13796 1616 aa7.37□□□□□ -1.23
PRKDC-202ENST00000338368 NEURL1BA8MQ27 555 aa7.37□□□□□ -1.23
PRKDC-202ENST00000338368 ANKARQ7Z5J8 1434 aa7.37□□□□□ -1.23
PRKDC-202ENST00000338368 POLR3DP05423 398 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-202ENST00000338368 USP48Q86UV5 1035 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 CEP57L1Q8IYX8 460 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 ZNF594Q96JF6 807 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-202ENST00000338368 ZSCAN16Q9H4T2 348 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-202ENST00000338368 KLF18A0A0U1RQI7 1052 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 PRIM1P49642 420 aaKnown RBP7.36□□□□□ -1.23
PRKDC-202ENST00000338368 TTLL7Q6ZT98 887 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 ORC3Q9UBD5 711 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-202ENST00000338368 LRSAM1Q6UWE0 723 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 CKAP2LQ8IYA6 745 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 SETD1BQ9UPS6 1966 aaKnown RBP7.36□□□□□ -1.23
PRKDC-202ENST00000338368 ZSCAN23Q3MJ62 389 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 FILIP1Q7Z7B0 1213 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 UNC5CLQ8IV45 518 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 HELLSQ9NRZ9 838 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 CNPY2Q9Y2B0 182 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 SYT1P21579 422 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 KBTBD3Q8NAB2 608 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 USP25Q9UHP3 1055 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 RAB11FIP4Q86YS3 637 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 ANKRD18AQ8IVF6 992 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 EDC3Q96F86 508 aaKnown RBP7.36□□□□□ -1.23
PRKDC-202ENST00000338368 NLRP3Q96P20 1036 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 NOL7Q9UMY1 257 aaKnown RBP7.36□□□□□ -1.23
PRKDC-202ENST00000338368 PTPRMP28827 1452 aa7.36□□□□□ -1.23
PRKDC-202ENST00000338368 UBAP1LF5GYI3 381 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 ITGA6P23229 1130 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 HSP90AA2PQ14568 343 aaPredicted RBP7.35□□□□□ -1.23
PRKDC-202ENST00000338368 IQSEC3Q9UPP2 1182 aaPredicted RBP7.35□□□□□ -1.23
PRKDC-202ENST00000338368 AXIN2Q9Y2T1 843 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 MCM5P33992 734 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 TMEM67Q5HYA8 995 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 Q6ZUG5 572 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 PCMTD1Q96MG8 357 aaPredicted RBP7.35□□□□□ -1.23
PRKDC-202ENST00000338368 ATP5JP18859 108 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 INO80Q9ULG1 1556 aaPredicted RBP7.35□□□□□ -1.23
PRKDC-202ENST00000338368 KDRP35968 1356 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 SAMD1Q6SPF0 538 aaPredicted RBP7.35□□□□□ -1.23
PRKDC-202ENST00000338368 NRXN1Q9ULB1 1477 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 DNM1Q05193 864 aaKnown RBP7.35□□□□□ -1.23
PRKDC-202ENST00000338368 MICU3Q86XE3 530 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 SETBP1Q9Y6X0 1596 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 UTP14AQ9BVJ6 771 aaKnown RBP7.35□□□□□ -1.23
PRKDC-202ENST00000338368 MKNK2Q9HBH9 465 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 ANO10Q9NW15 660 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 ANKIB1Q9P2G1 1089 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 USP31Q70CQ4 1352 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 RANBP6O60518 1105 aaKnown RBP7.35□□□□□ -1.23
PRKDC-202ENST00000338368 SMC2O95347 1197 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 METAP2P50579 478 aaKnown RBP eCLIP7.35□□□□□ -1.233e-6■■■□□ 17.3
PRKDC-202ENST00000338368 IKQ13123 557 aaPredicted RBP7.35□□□□□ -1.23
PRKDC-202ENST00000338368 PDILTQ8N807 584 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 CLSTN1O94985 981 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 GLI2P10070 1586 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 HSPA4P34932 840 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 DIP2CQ9Y2E4 1556 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 SERPINC1P01008 464 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 PANK2Q9BZ23 570 aa7.35□□□□□ -1.23
PRKDC-202ENST00000338368 APOBRQ0VD83 1088 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 NDUFB9Q9Y6M9 179 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 SLC27A2O14975 620 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 SETDB2Q96T68 719 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 ERBB4Q15303 1308 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 LRRIQ1Q96JM4 1722 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 TXLNAP40222 546 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 SSRP1Q08945 709 aaKnown RBP7.34□□□□□ -1.23
PRKDC-202ENST00000338368 CHST3Q7LGC8 479 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 XAGE2Q96GT9 111 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 PTCH1Q13635 1447 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 PARP10Q53GL7 1025 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 PALD1Q9ULE6 856 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 PRC1O43663 620 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 IPO7O95373 1038 aaKnown RBP7.34□□□□□ -1.23
PRKDC-202ENST00000338368 TCIRG1Q13488 830 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 SOGA3Q5TF21 947 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 GIMAP6Q6P9H5 292 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 MFSD6Q6ZSS7 791 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 C8orf37Q96NL8 207 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 CYP7A1P22680 504 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 RFC4P35249 363 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 CCDC129Q6ZRS4 1044 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 DZIP1Q86YF9 867 aaKnown RBP7.34□□□□□ -1.23
PRKDC-202ENST00000338368 CCDC144CPQ8IYA2 1237 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 CDCA7Q9BWT1 371 aaPredicted RBP7.34□□□□□ -1.23
PRKDC-202ENST00000338368 FILIP1LQ4L180 1135 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 TPTE2Q6XPS3 522 aa7.34□□□□□ -1.23
PRKDC-202ENST00000338368 CTCFLQ8NI51 663 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms