RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 MMP16P51512 607 aa12.99□□□□□ -0.33
UBE2D3-202ENST00000338145 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
UBE2D3-202ENST00000338145 SIK1P57059 783 aa12.98□□□□□ -0.33
UBE2D3-202ENST00000338145 QPCTQ16769 361 aa12.98□□□□□ -0.33
UBE2D3-202ENST00000338145 AMIGO3Q86WK7 504 aa12.98□□□□□ -0.33
UBE2D3-202ENST00000338145 USHBP1Q8N6Y0 703 aa12.98□□□□□ -0.33
UBE2D3-202ENST00000338145 PROCA1Q8NCQ7 364 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-202ENST00000338145 BCS1LQ9Y276 419 aa12.98□□□□□ -0.33
UBE2D3-202ENST00000338145 UBR3Q6ZT12 1888 aa12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 RGPD2P0DJD1 1756 aa12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 KIF24Q5T7B8 1368 aa12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 CYP27B1O15528 508 aa12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 DXOO77932 396 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 MMP10P09238 476 aa12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 FBLN1P23142 703 aa12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 CSPP1Q1MSJ5 1256 aa12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 COL13A1Q5TAT6 717 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 ARHGAP27Q6ZUM4 889 aa12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 NLGN1Q8N2Q7 840 aa12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 PIGBQ92521 554 aa12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 SYMPKQ92797 1274 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 SIN3AQ96ST3 1273 aa12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 NMRK2Q9NPI5 230 aa12.97□□□□□ -0.33
UBE2D3-202ENST00000338145 INSRP06213 1382 aa12.96□□□□□ -0.33
UBE2D3-202ENST00000338145 PLEKHG2Q9H7P9 1386 aa12.96□□□□□ -0.33
UBE2D3-202ENST00000338145 JUNDP17535 347 aa12.96□□□□□ -0.33
UBE2D3-202ENST00000338145 PRELPP51888 382 aa12.96□□□□□ -0.33
UBE2D3-202ENST00000338145 NEUROD1Q13562 356 aa12.96□□□□□ -0.33
UBE2D3-202ENST00000338145 RRS1Q15050 365 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-202ENST00000338145 TNS4Q8IZW8 715 aa12.96□□□□□ -0.33
UBE2D3-202ENST00000338145 PRR7Q8TB68 274 aa12.96□□□□□ -0.33
UBE2D3-202ENST00000338145 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-202ENST00000338145 PXDNLA1KZ92 1463 aa12.96□□□□□ -0.34
UBE2D3-202ENST00000338145 KDM2BQ8NHM5 1336 aa12.95□□□□□ -0.34
UBE2D3-202ENST00000338145 S1PR4O95977 384 aa12.95□□□□□ -0.34
UBE2D3-202ENST00000338145 LINC00116Q8NCU8 138 aa12.95□□□□□ -0.34
UBE2D3-202ENST00000338145 CCDC87Q9NVE4 849 aa12.95□□□□□ -0.34
UBE2D3-202ENST00000338145 SPG7Q9UQ90 795 aa12.95□□□□□ -0.34
UBE2D3-202ENST00000338145 WDR90Q96KV7 1748 aa12.95□□□□□ -0.34
UBE2D3-202ENST00000338145 TOGARAM1Q9Y4F4 1720 aa12.95□□□□□ -0.34
UBE2D3-202ENST00000338145 A0A0G2JLW4 131 aa12.94□□□□□ -0.34
UBE2D3-202ENST00000338145 TMF1P82094 1093 aa12.94□□□□□ -0.34
UBE2D3-202ENST00000338145 TRAPPC3LQ5T215 181 aa12.94□□□□□ -0.34
UBE2D3-202ENST00000338145 PPP1R18Q6NYC8 613 aa12.94□□□□□ -0.34
UBE2D3-202ENST00000338145 FLT4P35916 1363 aa12.94□□□□□ -0.34
UBE2D3-202ENST00000338145 KIF13BQ9NQT8 1826 aa12.93□□□□□ -0.34
UBE2D3-202ENST00000338145 FYB1O15117 783 aa12.93□□□□□ -0.34
UBE2D3-202ENST00000338145 HSP90AB2PQ58FF8 381 aa12.93□□□□□ -0.34
UBE2D3-202ENST00000338145 SMIM5Q71RC9 77 aa12.93□□□□□ -0.34
UBE2D3-202ENST00000338145 ANKLE1Q8NAG6 615 aa12.93□□□□□ -0.34
UBE2D3-202ENST00000338145 TMOD3Q9NYL9 352 aa12.93□□□□□ -0.34
UBE2D3-202ENST00000338145 RTCBQ9Y3I0 505 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-202ENST00000338145 ITGB4P16144 1822 aa12.92□□□□□ -0.34
UBE2D3-202ENST00000338145 CFAP99D6REC4 459 aa12.92□□□□□ -0.34
UBE2D3-202ENST00000338145 C9orf131Q5VYM1 1079 aa12.92□□□□□ -0.34
UBE2D3-202ENST00000338145 C10orf71Q711Q0 1435 aa12.92□□□□□ -0.34
UBE2D3-202ENST00000338145 HELBQ8NG08 1087 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-202ENST00000338145 RGS20O76081 388 aa12.91□□□□□ -0.34
UBE2D3-202ENST00000338145 DPEP1P16444 411 aa12.91□□□□□ -0.34
UBE2D3-202ENST00000338145 RTL5Q5HYW3 569 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-202ENST00000338145 SMC1BQ8NDV3 1235 aa12.91□□□□□ -0.34
UBE2D3-202ENST00000338145 GGNBP2Q9H3C7 697 aa12.91□□□□□ -0.34
UBE2D3-202ENST00000338145 PIM2Q9P1W9 311 aa12.91□□□□□ -0.34
UBE2D3-202ENST00000338145 PARP3Q9Y6F1 533 aa12.91□□□□□ -0.34
UBE2D3-202ENST00000338145 MAP2P11137 1827 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-202ENST00000338145 RNF223E7ERA6 249 aa12.9□□□□□ -0.34
UBE2D3-202ENST00000338145 HTRA3P83110 453 aa12.9□□□□□ -0.34
UBE2D3-202ENST00000338145 ITPK1Q13572 414 aa12.9□□□□□ -0.34
UBE2D3-202ENST00000338145 PTPRNQ16849 979 aa12.9□□□□□ -0.34
UBE2D3-202ENST00000338145 RC3H1Q5TC82 1133 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-202ENST00000338145 PRDM9Q9NQV7 894 aa12.9□□□□□ -0.34
UBE2D3-202ENST00000338145 ASAP1Q9ULH1 1129 aa12.9□□□□□ -0.34
UBE2D3-202ENST00000338145 RFC4P35249 363 aa12.89□□□□□ -0.35
UBE2D3-202ENST00000338145 RFC5P40937 340 aa12.89□□□□□ -0.35
UBE2D3-202ENST00000338145 TMEM259Q4ZIN3 620 aa12.89□□□□□ -0.35
UBE2D3-202ENST00000338145 IFNL2Q8IZJ0 200 aa12.89□□□□□ -0.35
UBE2D3-202ENST00000338145 TESK2Q96S53 571 aa12.89□□□□□ -0.35
UBE2D3-202ENST00000338145 N4BP2Q86UW6 1770 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-202ENST00000338145 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-202ENST00000338145 PKD1L3Q7Z443 1732 aa12.88□□□□□ -0.35
UBE2D3-202ENST00000338145 KIAA1551Q9HCM1 1747 aa12.88□□□□□ -0.35
UBE2D3-202ENST00000338145 DALRD3Q5D0E6 543 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-202ENST00000338145 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
UBE2D3-202ENST00000338145 RRAGCQ9HB90 399 aa12.88□□□□□ -0.35
UBE2D3-202ENST00000338145 ATG3Q9NT62 314 aa12.88□□□□□ -0.35
UBE2D3-202ENST00000338145 NCAPD2Q15021 1401 aa12.88□□□□□ -0.35
UBE2D3-202ENST00000338145 TONSLQ96HA7 1378 aa12.87□□□□□ -0.35
UBE2D3-202ENST00000338145 ST20-MTHFSA0A0A6YYL1 179 aa12.87□□□□□ -0.35
UBE2D3-202ENST00000338145 RPS6KA4O75676 772 aa12.87□□□□□ -0.35
UBE2D3-202ENST00000338145 GYS1P13807 737 aa12.87□□□□□ -0.35
UBE2D3-202ENST00000338145 KCNA3P22001 575 aa12.87□□□□□ -0.35
UBE2D3-202ENST00000338145 LYPD8Q6UX82 237 aa12.87□□□□□ -0.35
UBE2D3-202ENST00000338145 RNF181Q9P0P0 153 aa12.87□□□□□ -0.35
UBE2D3-202ENST00000338145 PHKG2P15735 406 aa12.86□□□□□ -0.35
UBE2D3-202ENST00000338145 TRIM26Q12899 539 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-202ENST00000338145 KCPQ6ZWJ8 1503 aa12.86□□□□□ -0.35
UBE2D3-202ENST00000338145 PCNTO95613 3336 aa12.86□□□□□ -0.35
UBE2D3-202ENST00000338145 CNTNAP4Q9C0A0 1308 aa12.86□□□□□ -0.35
UBE2D3-202ENST00000338145 ARFGEF1Q9Y6D6 1849 aa12.85□□□□□ -0.35
UBE2D3-202ENST00000338145 C4AP0C0L4 1744 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms