RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 CDCA8Q53HL2 280 aa21.15■□□□□ 0.98
TSPO-202ENST00000337554 PRAMEF22A3QJZ6 481 aa21.14■□□□□ 0.97
TSPO-202ENST00000337554 KCNQ3O43525 872 aa21.14■□□□□ 0.97
TSPO-202ENST00000337554 GTF2E1P29083 439 aaPredicted RBP21.14■□□□□ 0.97
TSPO-202ENST00000337554 KIAA2012Q0VF49 1180 aa21.14■□□□□ 0.97
TSPO-202ENST00000337554 C3orf67Q6ZVT6 689 aa21.14■□□□□ 0.97
TSPO-202ENST00000337554 OTOP1Q7RTM1 612 aa21.14■□□□□ 0.97
TSPO-202ENST00000337554 DPF2Q92785 391 aa21.14■□□□□ 0.97
TSPO-202ENST00000337554 DCPSQ96C86 337 aaKnown RBP21.14■□□□□ 0.97
TSPO-202ENST00000337554 CDCA5Q96FF9 252 aa21.14■□□□□ 0.97
TSPO-202ENST00000337554 FMNL2Q96PY5 1086 aa21.14■□□□□ 0.97
TSPO-202ENST00000337554 ARMC5Q96C12 935 aa21.13■□□□□ 0.97
TSPO-202ENST00000337554 ATP6V0A2Q9Y487 856 aa21.13■□□□□ 0.97
TSPO-202ENST00000337554 TRIM17Q9Y577 477 aa21.13■□□□□ 0.97
TSPO-202ENST00000337554 UNC80Q8N2C7 3258 aa21.13■□□□□ 0.97
TSPO-202ENST00000337554 ASTN2O75129 1339 aaPredicted RBP21.12■□□□□ 0.97
TSPO-202ENST00000337554 IL17REQ8NFR9 667 aa21.12■□□□□ 0.97
TSPO-202ENST00000337554 PRO3102Q9H379 93 aa21.12■□□□□ 0.97
TSPO-202ENST00000337554 SIPA1L3O60292 1781 aaPredicted RBP21.12■□□□□ 0.97
TSPO-202ENST00000337554 NBPF26B4DH59 902 aa21.11■□□□□ 0.97
TSPO-202ENST00000337554 NBPF10Q6P3W6 841 aaKnown RBP21.11■□□□□ 0.97
TSPO-202ENST00000337554 MOB2Q70IA6 237 aa21.11■□□□□ 0.97
TSPO-202ENST00000337554 RBM17Q96I25 401 aaKnown RBP21.11■□□□□ 0.97
TSPO-202ENST00000337554 LAMA3Q16787 3333 aa21.11■□□□□ 0.97
TSPO-202ENST00000337554 SUPT20HQ8NEM7 779 aa21.1■□□□□ 0.97
TSPO-202ENST00000337554 RBM26Q5T8P6 1007 aaKnown RBP21.09■□□□□ 0.97
TSPO-202ENST00000337554 COL25A1Q9BXS0 654 aaPredicted RBP21.09■□□□□ 0.97
TSPO-202ENST00000337554 PSMD14O00487 310 aa21.08■□□□□ 0.97
TSPO-202ENST00000337554 HMOX1P09601 288 aa21.08■□□□□ 0.97
TSPO-202ENST00000337554 FKBP1BP68106 108 aa21.08■□□□□ 0.97
TSPO-202ENST00000337554 GGA3Q9NZ52 723 aa21.08■□□□□ 0.97
TSPO-202ENST00000337554 PTPN22Q9Y2R2 807 aa21.08■□□□□ 0.97
TSPO-202ENST00000337554 SULF1Q8IWU6 871 aa21.07■□□□□ 0.96
TSPO-202ENST00000337554 NYXQ9GZU5 481 aa21.07■□□□□ 0.96
TSPO-202ENST00000337554 UBE2Q2LH0YL09 131 aa21.05■□□□□ 0.96
TSPO-202ENST00000337554 SOX1O00570 391 aaPredicted RBP21.05■□□□□ 0.96
TSPO-202ENST00000337554 DPP8Q6V1X1 898 aaPredicted RBP21.05■□□□□ 0.96
TSPO-202ENST00000337554 CAP1Q01518 475 aa21.04■□□□□ 0.96
TSPO-202ENST00000337554 TEFQ10587 303 aa21.04■□□□□ 0.96
TSPO-202ENST00000337554 DUOX1Q9NRD9 1551 aa21.04■□□□□ 0.96
TSPO-202ENST00000337554 UBN2Q6ZU65 1347 aa21.04■□□□□ 0.96
TSPO-202ENST00000337554 MKRN3Q13064 507 aaKnown RBP21.03■□□□□ 0.96
TSPO-202ENST00000337554 KIF4BQ2VIQ3 1234 aa21.03■□□□□ 0.96
TSPO-202ENST00000337554 MPNDQ8N594 471 aa21.03■□□□□ 0.96
TSPO-202ENST00000337554 ABCC4O15439 1325 aa21.03■□□□□ 0.96
TSPO-202ENST00000337554 SUSD4Q5VX71 490 aa21.02■□□□□ 0.96
TSPO-202ENST00000337554 ZNF333Q96JL9 665 aa21.02■□□□□ 0.96
TSPO-202ENST00000337554 KCNQ5Q9NR82 932 aa21.02■□□□□ 0.96
TSPO-202ENST00000337554 IBTKQ9P2D0 1353 aaPredicted RBP21.01■□□□□ 0.95
TSPO-202ENST00000337554 SP8Q8IXZ3 490 aa21.01■□□□□ 0.95
TSPO-202ENST00000337554 RTL9Q8NET4 1388 aa21■□□□□ 0.95
TSPO-202ENST00000337554 RPS12P25398 132 aaKnown RBP21■□□□□ 0.95
TSPO-202ENST00000337554 LRCH3Q96II8 777 aa21■□□□□ 0.95
TSPO-202ENST00000337554 VCANP13611 3396 aa21■□□□□ 0.95
TSPO-202ENST00000337554 ZNF609O15014 1411 aa20.99■□□□□ 0.95
TSPO-202ENST00000337554 ANGEL2Q5VTE6 544 aaKnown RBP20.99■□□□□ 0.95
TSPO-202ENST00000337554 TMEM106CQ9BVX2 250 aa20.99■□□□□ 0.95
TSPO-202ENST00000337554 TMX4Q9H1E5 349 aaPredicted RBP20.99■□□□□ 0.95
TSPO-202ENST00000337554 CEMIPQ8WUJ3 1361 aa20.98■□□□□ 0.95
TSPO-202ENST00000337554 NTSR2O95665 410 aa20.98■□□□□ 0.95
TSPO-202ENST00000337554 SREBF2Q12772 1141 aa20.98■□□□□ 0.95
TSPO-202ENST00000337554 BTBD11A6QL63 1104 aa20.97■□□□□ 0.95
TSPO-202ENST00000337554 DBNDD1Q9H9R9 158 aa20.97■□□□□ 0.95
TSPO-202ENST00000337554 SCAF8Q9UPN6 1271 aaKnown RBP20.97■□□□□ 0.95
TSPO-202ENST00000337554 SPTBN5Q9NRC6 3674 aaKnown RBP20.97■□□□□ 0.95
TSPO-202ENST00000337554 SNRPA1P09661 255 aaKnown RBP20.96■□□□□ 0.95
TSPO-202ENST00000337554 GPTP24298 496 aa20.96■□□□□ 0.95
TSPO-202ENST00000337554 CD99L2Q8TCZ2 262 aa20.96■□□□□ 0.95
TSPO-202ENST00000337554 NUP98P52948 1817 aa20.96■□□□□ 0.95
TSPO-202ENST00000337554 GNAT3A8MTJ3 354 aa20.95■□□□□ 0.94
TSPO-202ENST00000337554 ERVV-1B6SEH8 477 aa20.95■□□□□ 0.94
TSPO-202ENST00000337554 BBOX1O75936 387 aa20.95■□□□□ 0.94
TSPO-202ENST00000337554 SCARF1Q14162 830 aa20.95■□□□□ 0.94
TSPO-202ENST00000337554 PRAMEF18Q5VWM3 479 aa20.95■□□□□ 0.94
TSPO-202ENST00000337554 WTIPA6NIX2 430 aaPredicted RBP20.93■□□□□ 0.94
TSPO-202ENST00000337554 ALDH1A1P00352 501 aa20.93■□□□□ 0.94
TSPO-202ENST00000337554 MORC1Q86VD1 984 aa20.93■□□□□ 0.94
TSPO-202ENST00000337554 ZNF34Q8IZ26 560 aa20.93■□□□□ 0.94
TSPO-202ENST00000337554 NLRP3Q96P20 1036 aa20.93■□□□□ 0.94
TSPO-202ENST00000337554 ZNF280AP59817 542 aaPredicted RBP20.92■□□□□ 0.94
TSPO-202ENST00000337554 SLC10A5Q5PT55 438 aa20.92■□□□□ 0.94
TSPO-202ENST00000337554 IFNL1Q8IU54 200 aa20.92■□□□□ 0.94
TSPO-202ENST00000337554 ERO1AQ96HE7 468 aa20.92■□□□□ 0.94
TSPO-202ENST00000337554 EFCC1Q9HA90 598 aa20.92■□□□□ 0.94
TSPO-202ENST00000337554 MAP3K15Q6ZN16 1313 aa20.92■□□□□ 0.94
TSPO-202ENST00000337554 KDM3BQ7LBC6 1761 aa20.92■□□□□ 0.94
TSPO-202ENST00000337554 PTPN12Q05209 780 aaKnown RBP20.91■□□□□ 0.94
TSPO-202ENST00000337554 TTLL7Q6ZT98 887 aa20.91■□□□□ 0.94
TSPO-202ENST00000337554 IGF2BP3O00425 579 aaKnown RBP eCLIP20.9■□□□□ 0.94
TSPO-202ENST00000337554 VIL1P09327 827 aaKnown RBP20.9■□□□□ 0.94
TSPO-202ENST00000337554 WASHC4Q2M389 1173 aa20.9■□□□□ 0.94
TSPO-202ENST00000337554 SPRYD7Q5W111 196 aa20.9■□□□□ 0.94
TSPO-202ENST00000337554 SLC4A8Q2Y0W8 1093 aa20.89■□□□□ 0.93
TSPO-202ENST00000337554 DPF3Q92784 378 aa20.89■□□□□ 0.93
TSPO-202ENST00000337554 STXBP5LQ9Y2K9 1186 aa20.89■□□□□ 0.93
TSPO-202ENST00000337554 SCN9AQ15858 1988 aa20.88■□□□□ 0.93
TSPO-202ENST00000337554 LRRC37AA6NMS7 1700 aa20.88■□□□□ 0.93
TSPO-202ENST00000337554 A0A1W2PPC1 479 aa20.88■□□□□ 0.93
TSPO-202ENST00000337554 ECE2O60344 883 aa20.88■□□□□ 0.93
TSPO-202ENST00000337554 NGEFQ8N5V2 710 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms