RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 GBP6Q6ZN66 633 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 ATP5J2-PTCD1G3V325 749 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 WASF1Q92558 559 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 SAMD9Q5K651 1589 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 ZFYVE27Q5T4F4 411 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 INTS4Q96HW7 963 aaKnown RBP18.5■□□□□ 0.55
NPHP3-201ENST00000337331 NECAB1Q8N987 351 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 PHACTR3Q96KR7 559 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 SNRKQ9NRH2 765 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 PIK3R4Q99570 1358 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 MINDY4BA8MYZ0 360 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 NF2P35240 595 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 FSIP1Q8NA03 581 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 ESYT1Q9BSJ8 1104 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 NAPBQ9H115 298 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 SYCP1Q15431 976 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 SOGA3Q5TF21 947 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 KLHL10Q6JEL2 608 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 CNPY4Q8N129 248 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 CRACR2AQ9BSW2 395 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 GOLIM4O00461 696 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 ZBTB3Q9H5J0 574 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 IFIT5Q13325 482 aaKnown RBP18.49■□□□□ 0.55
NPHP3-201ENST00000337331 KIF4BQ2VIQ3 1234 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 MEX3CQ5U5Q3 659 aaKnown RBP18.49■□□□□ 0.55
NPHP3-201ENST00000337331 PRM3Q9NNZ6 103 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 LIG1P18858 919 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 TANGO6Q9C0B7 1094 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 BIN1O00499 593 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 ZNF213O14771 459 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 SSBP05455 408 aaKnown RBP eCLIP18.48■□□□□ 0.55
NPHP3-201ENST00000337331 IGHMBP2P38935 993 aaKnown RBP18.48■□□□□ 0.55
NPHP3-201ENST00000337331 GYS2P54840 703 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 PIK3C2GO75747 1445 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 ODF2Q5BJF6 829 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 RNF187Q5TA31 235 aaPredicted RBP18.48■□□□□ 0.55
NPHP3-201ENST00000337331 FAM173BQ6P4H8 233 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 DCTPP1Q9H773 170 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 TCOF1Q13428 1488 aaKnown RBP18.48■□□□□ 0.55
NPHP3-201ENST00000337331 POGZQ7Z3K3 1410 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 EPB41L2O43491 1005 aaKnown RBP18.48■□□□□ 0.55
NPHP3-201ENST00000337331 ZCCHC17Q9NP64 241 aaKnown RBP18.48■□□□□ 0.55
NPHP3-201ENST00000337331 ASXL2Q76L83 1435 aa18.47■□□□□ 0.55
NPHP3-201ENST00000337331 SEC31AO94979 1220 aaKnown RBP18.47■□□□□ 0.55
NPHP3-201ENST00000337331 GBP3Q9H0R5 595 aa18.47■□□□□ 0.55
NPHP3-201ENST00000337331 GOLGA8BA8MQT2 603 aa18.47■□□□□ 0.55
NPHP3-201ENST00000337331 CTAGE5O15320 804 aa18.47■□□□□ 0.55
NPHP3-201ENST00000337331 NEK1Q96PY6 1258 aa18.47■□□□□ 0.55
NPHP3-201ENST00000337331 RNF216Q9NWF9 866 aaPredicted RBP18.47■□□□□ 0.55
NPHP3-201ENST00000337331 STX1AQ16623 288 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 BICDL1Q6ZP65 573 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 GOLGA5Q8TBA6 731 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 CCDC12Q8WUD4 166 aaPredicted RBP18.46■□□□□ 0.55
NPHP3-201ENST00000337331 CACTINQ8WUQ7 758 aaKnown RBP18.46■□□□□ 0.55
NPHP3-201ENST00000337331 ISM2Q6H9L7 571 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 PLCH2O75038 1416 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 HAND2P61296 217 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 EIF4A2Q14240 407 aaKnown RBP18.46■□□□□ 0.55
NPHP3-201ENST00000337331 CLEC17AQ6ZS10 378 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 INSRP06213 1382 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 CEP57Q86XR8 500 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 CHPF2Q9P2E5 772 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 CLCN6P51797 869 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 CCDC181Q5TID7 509 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 BRF1Q92994 677 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 EIF5P55010 431 aaKnown RBP18.45■□□□□ 0.54
NPHP3-201ENST00000337331 ATP8B2P98198 1209 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 AOPEPQ8N6M6 819 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 RABEP2Q9H5N1 569 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 DENND4BO75064 1496 aaPredicted RBP18.45■□□□□ 0.54
NPHP3-201ENST00000337331 EBAG9O00559 213 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 PNMA6AP0CW24 399 aaPredicted RBP18.45■□□□□ 0.54
NPHP3-201ENST00000337331 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.45■□□□□ 0.54
NPHP3-201ENST00000337331 TOP1P11387 765 aaKnown RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 ANAPC15P60006 121 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 SARNPP82979 210 aaKnown RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 DDX46Q7L014 1031 aaKnown RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 LUC7LQ9NQ29 371 aaKnown RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 TMOD3Q9NYL9 352 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 NBPF11Q86T75 865 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 NCAPGQ9BPX3 1015 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 SYCP2Q9BX26 1530 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 NUTM2BA6NNL0 878 aaPredicted RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 NUTM2EB1AL46 878 aaPredicted RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 POLR3DP05423 398 aaPredicted RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 GSPT1P15170 499 aaKnown RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 NUTM2AQ8IVF1 878 aaPredicted RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 CCDC150Q8NCX0 1101 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 KIF2CQ99661 725 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 ORC3Q9UBD5 711 aaPredicted RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 CEP131Q9UPN4 1083 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 CCDC196A0A1B0GTZ2 297 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 CAVIN2O95810 425 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 CYP2C19P33261 490 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 CEP85Q6P2H3 762 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 RAB11FIP4Q86YS3 637 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 GPTP24298 496 aa18.43■□□□□ 0.54
NPHP3-201ENST00000337331 DDIT3P35638 169 aa18.43■□□□□ 0.54
NPHP3-201ENST00000337331 MAP3K12Q12852 859 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms