RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 GBP6Q6ZN66 633 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 ATP5J2-PTCD1G3V325 749 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 WASF1Q92558 559 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 SAMD9Q5K651 1589 aa18.51■□□□□ 0.55
NPHP3-201ENST00000337331 ZFYVE27Q5T4F4 411 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 INTS4Q96HW7 963 aaKnown RBP18.5■□□□□ 0.55
NPHP3-201ENST00000337331 NECAB1Q8N987 351 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 PHACTR3Q96KR7 559 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 SNRKQ9NRH2 765 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 PIK3R4Q99570 1358 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 MINDY4BA8MYZ0 360 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 NF2P35240 595 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 FSIP1Q8NA03 581 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 ESYT1Q9BSJ8 1104 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 NAPBQ9H115 298 aa18.5■□□□□ 0.55
NPHP3-201ENST00000337331 SYCP1Q15431 976 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 SOGA3Q5TF21 947 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 KLHL10Q6JEL2 608 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 CNPY4Q8N129 248 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 CRACR2AQ9BSW2 395 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 GOLIM4O00461 696 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 ZBTB3Q9H5J0 574 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 IFIT5Q13325 482 aaKnown RBP18.49■□□□□ 0.55
NPHP3-201ENST00000337331 KIF4BQ2VIQ3 1234 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 MEX3CQ5U5Q3 659 aaKnown RBP18.49■□□□□ 0.55
NPHP3-201ENST00000337331 PRM3Q9NNZ6 103 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 LIG1P18858 919 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 TANGO6Q9C0B7 1094 aa18.49■□□□□ 0.55
NPHP3-201ENST00000337331 BIN1O00499 593 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 ZNF213O14771 459 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 SSBP05455 408 aaKnown RBP eCLIP18.48■□□□□ 0.55
NPHP3-201ENST00000337331 IGHMBP2P38935 993 aaKnown RBP18.48■□□□□ 0.55
NPHP3-201ENST00000337331 GYS2P54840 703 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 PIK3C2GO75747 1445 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 ODF2Q5BJF6 829 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 RNF187Q5TA31 235 aaPredicted RBP18.48■□□□□ 0.55
NPHP3-201ENST00000337331 FAM173BQ6P4H8 233 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 DCTPP1Q9H773 170 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 TCOF1Q13428 1488 aaKnown RBP18.48■□□□□ 0.55
NPHP3-201ENST00000337331 POGZQ7Z3K3 1410 aa18.48■□□□□ 0.55
NPHP3-201ENST00000337331 EPB41L2O43491 1005 aaKnown RBP18.48■□□□□ 0.55
NPHP3-201ENST00000337331 ZCCHC17Q9NP64 241 aaKnown RBP18.48■□□□□ 0.55
NPHP3-201ENST00000337331 ASXL2Q76L83 1435 aa18.47■□□□□ 0.55
NPHP3-201ENST00000337331 SEC31AO94979 1220 aaKnown RBP18.47■□□□□ 0.55
NPHP3-201ENST00000337331 GBP3Q9H0R5 595 aa18.47■□□□□ 0.55
NPHP3-201ENST00000337331 GOLGA8BA8MQT2 603 aa18.47■□□□□ 0.55
NPHP3-201ENST00000337331 CTAGE5O15320 804 aa18.47■□□□□ 0.55
NPHP3-201ENST00000337331 NEK1Q96PY6 1258 aa18.47■□□□□ 0.55
NPHP3-201ENST00000337331 RNF216Q9NWF9 866 aaPredicted RBP18.47■□□□□ 0.55
NPHP3-201ENST00000337331 STX1AQ16623 288 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 BICDL1Q6ZP65 573 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 GOLGA5Q8TBA6 731 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 CCDC12Q8WUD4 166 aaPredicted RBP18.46■□□□□ 0.55
NPHP3-201ENST00000337331 CACTINQ8WUQ7 758 aaKnown RBP18.46■□□□□ 0.55
NPHP3-201ENST00000337331 ISM2Q6H9L7 571 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 PLCH2O75038 1416 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 HAND2P61296 217 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 EIF4A2Q14240 407 aaKnown RBP18.46■□□□□ 0.55
NPHP3-201ENST00000337331 CLEC17AQ6ZS10 378 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 INSRP06213 1382 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 CEP57Q86XR8 500 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 CHPF2Q9P2E5 772 aa18.46■□□□□ 0.55
NPHP3-201ENST00000337331 CLCN6P51797 869 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 CCDC181Q5TID7 509 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 BRF1Q92994 677 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 EIF5P55010 431 aaKnown RBP18.45■□□□□ 0.54
NPHP3-201ENST00000337331 ATP8B2P98198 1209 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 AOPEPQ8N6M6 819 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 RABEP2Q9H5N1 569 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 DENND4BO75064 1496 aaPredicted RBP18.45■□□□□ 0.54
NPHP3-201ENST00000337331 EBAG9O00559 213 aa18.45■□□□□ 0.54
NPHP3-201ENST00000337331 PNMA6AP0CW24 399 aaPredicted RBP18.45■□□□□ 0.54
NPHP3-201ENST00000337331 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.45■□□□□ 0.54
NPHP3-201ENST00000337331 TOP1P11387 765 aaKnown RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 ANAPC15P60006 121 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 SARNPP82979 210 aaKnown RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 DDX46Q7L014 1031 aaKnown RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 LUC7LQ9NQ29 371 aaKnown RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 TMOD3Q9NYL9 352 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 NBPF11Q86T75 865 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 NCAPGQ9BPX3 1015 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 SYCP2Q9BX26 1530 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 NUTM2BA6NNL0 878 aaPredicted RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 NUTM2EB1AL46 878 aaPredicted RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 POLR3DP05423 398 aaPredicted RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 GSPT1P15170 499 aaKnown RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 NUTM2AQ8IVF1 878 aaPredicted RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 CCDC150Q8NCX0 1101 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 KIF2CQ99661 725 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 ORC3Q9UBD5 711 aaPredicted RBP18.44■□□□□ 0.54
NPHP3-201ENST00000337331 CEP131Q9UPN4 1083 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 CCDC196A0A1B0GTZ2 297 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 CAVIN2O95810 425 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 CYP2C19P33261 490 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 CEP85Q6P2H3 762 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 RAB11FIP4Q86YS3 637 aa18.44■□□□□ 0.54
NPHP3-201ENST00000337331 GPTP24298 496 aa18.43■□□□□ 0.54
NPHP3-201ENST00000337331 DDIT3P35638 169 aa18.43■□□□□ 0.54
NPHP3-201ENST00000337331 MAP3K12Q12852 859 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms