RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 TICAM2Q86XR7 235 aa17.04■□□□□ 0.32
LIPA-202ENST00000336233 CNPY2Q9Y2B0 182 aa17.04■□□□□ 0.32
LIPA-202ENST00000336233 SHANK3Q9BYB0 1731 aa17.03■□□□□ 0.32
LIPA-202ENST00000336233 KCNJ4P48050 445 aa17.03■□□□□ 0.32
LIPA-202ENST00000336233 CSPP1Q1MSJ5 1256 aa17.03■□□□□ 0.32
LIPA-202ENST00000336233 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
LIPA-202ENST00000336233 PCDH11XQ9BZA7 1347 aa17.03■□□□□ 0.32
LIPA-202ENST00000336233 PCDH11YQ9BZA8 1340 aa17.03■□□□□ 0.32
LIPA-202ENST00000336233 LETM1O95202 739 aaPredicted RBP17.03■□□□□ 0.32
LIPA-202ENST00000336233 TFCP2Q12800 502 aa17.03■□□□□ 0.32
LIPA-202ENST00000336233 HSP90AA2PQ14568 343 aaPredicted RBP17.03■□□□□ 0.32
LIPA-202ENST00000336233 CCDC183Q5T5S1 534 aa17.03■□□□□ 0.32
LIPA-202ENST00000336233 LARP6Q9BRS8 491 aaKnown RBP17.03■□□□□ 0.32
LIPA-202ENST00000336233 GDPD2Q9HCC8 539 aa17.03■□□□□ 0.32
LIPA-202ENST00000336233 ABCA3Q99758 1704 aa17.02■□□□□ 0.32
LIPA-202ENST00000336233 H7C1W4 665 aa17.02■□□□□ 0.32
LIPA-202ENST00000336233 RPS6KB1P23443 525 aa17.02■□□□□ 0.32
LIPA-202ENST00000336233 TPCN1Q9ULQ1 816 aa17.02■□□□□ 0.32
LIPA-202ENST00000336233 WDR17Q8IZU2 1322 aa17.02■□□□□ 0.32
LIPA-202ENST00000336233 TNS2Q63HR2 1409 aa17.02■□□□□ 0.32
LIPA-202ENST00000336233 A0A087WZG4 1122 aa17.02■□□□□ 0.31
LIPA-202ENST00000336233 TAF5LO75529 589 aa17.02■□□□□ 0.31
LIPA-202ENST00000336233 ERVV-2B6SEH9 535 aa17.01■□□□□ 0.31
LIPA-202ENST00000336233 BLOC1S2Q6QNY1 142 aa17.01■□□□□ 0.31
LIPA-202ENST00000336233 FAM184AQ8NB25 1140 aa17.01■□□□□ 0.31
LIPA-202ENST00000336233 HAUS7Q99871 368 aa17.01■□□□□ 0.31
LIPA-202ENST00000336233 NOL7Q9UMY1 257 aaKnown RBP17.01■□□□□ 0.31
LIPA-202ENST00000336233 KRT32Q14532 448 aa17.01■□□□□ 0.31
LIPA-202ENST00000336233 NKX1-1Q15270 411 aaPredicted RBP17.01■□□□□ 0.31
LIPA-202ENST00000336233 ZNF589Q86UQ0 364 aaPredicted RBP17.01■□□□□ 0.31
LIPA-202ENST00000336233 NBPF26B4DH59 902 aa17■□□□□ 0.31
LIPA-202ENST00000336233 NBPF14Q5TI25 921 aa17■□□□□ 0.31
LIPA-202ENST00000336233 NBPF10Q6P3W6 841 aaKnown RBP17■□□□□ 0.31
LIPA-202ENST00000336233 NBPF15Q8N660 670 aa17■□□□□ 0.31
LIPA-202ENST00000336233 GPR108Q9NPR9 543 aa17■□□□□ 0.31
LIPA-202ENST00000336233 SPEF2Q9C093 1822 aa17■□□□□ 0.31
LIPA-202ENST00000336233 COL5A2P05997 1499 aaPredicted RBP17■□□□□ 0.31
LIPA-202ENST00000336233 FOXO4P98177 505 aa17■□□□□ 0.31
LIPA-202ENST00000336233 UVSSAQ2YD98 709 aa17■□□□□ 0.31
LIPA-202ENST00000336233 ZNF609O15014 1411 aa17■□□□□ 0.31
LIPA-202ENST00000336233 PIP4K2AP48426 406 aaPredicted RBP17■□□□□ 0.31
LIPA-202ENST00000336233 FOXD4L6Q3SYB3 417 aaPredicted RBP17■□□□□ 0.31
LIPA-202ENST00000336233 FOXD4L3Q6VB84 417 aaPredicted RBP17■□□□□ 0.31
LIPA-202ENST00000336233 PALLDQ8WX93 1383 aa16.99■□□□□ 0.31
LIPA-202ENST00000336233 MCM5P33992 734 aa16.99■□□□□ 0.31
LIPA-202ENST00000336233 ATP5J2-PTCD1G3V325 749 aa16.99■□□□□ 0.31
LIPA-202ENST00000336233 PTCD1O75127 700 aaKnown RBP16.99■□□□□ 0.31
LIPA-202ENST00000336233 PDCP20941 246 aa16.99■□□□□ 0.31
LIPA-202ENST00000336233 TOB2Q14106 344 aaPredicted RBP16.99■□□□□ 0.31
LIPA-202ENST00000336233 ZCRB1Q8TBF4 217 aaKnown RBP16.99■□□□□ 0.31
LIPA-202ENST00000336233 SH3TC1Q8TE82 1336 aa16.98■□□□□ 0.31
LIPA-202ENST00000336233 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
LIPA-202ENST00000336233 MSNP26038 577 aaKnown RBP16.98■□□□□ 0.31
LIPA-202ENST00000336233 BRINP3Q76B58 766 aa16.98■□□□□ 0.31
LIPA-202ENST00000336233 DBNDD2Q9BQY9 259 aa16.98■□□□□ 0.31
LIPA-202ENST00000336233 ZNF500O60304 480 aaPredicted RBP16.97■□□□□ 0.31
LIPA-202ENST00000336233 LMBR1LQ6UX01 489 aa16.97■□□□□ 0.31
LIPA-202ENST00000336233 NECAB1Q8N987 351 aa16.97■□□□□ 0.31
LIPA-202ENST00000336233 JARID2Q92833 1246 aaPredicted RBP16.97■□□□□ 0.31
LIPA-202ENST00000336233 CWC25Q9NXE8 425 aaPredicted RBP16.97■□□□□ 0.31
LIPA-202ENST00000336233 CCDC39Q9UFE4 941 aa16.97■□□□□ 0.31
LIPA-202ENST00000336233 EDC3Q96F86 508 aaKnown RBP16.97■□□□□ 0.31
LIPA-202ENST00000336233 NAP1L5Q96NT1 182 aaPredicted RBP16.97■□□□□ 0.31
LIPA-202ENST00000336233 TAF6LQ9Y6J9 622 aa16.97■□□□□ 0.31
LIPA-202ENST00000336233 ATG9AQ7Z3C6 839 aa16.96■□□□□ 0.31
LIPA-202ENST00000336233 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.96■□□□□ 0.31
LIPA-202ENST00000336233 ELP1O95163 1332 aa16.96■□□□□ 0.31
LIPA-202ENST00000336233 SOS2Q07890 1332 aaPredicted RBP16.96■□□□□ 0.31
LIPA-202ENST00000336233 FIBPO43427 364 aa16.96■□□□□ 0.31
LIPA-202ENST00000336233 DNM1Q05193 864 aaKnown RBP16.96■□□□□ 0.31
LIPA-202ENST00000336233 COL9A3Q14050 684 aaPredicted RBP16.96■□□□□ 0.31
LIPA-202ENST00000336233 MCMDC2Q4G0Z9 681 aa16.96■□□□□ 0.31
LIPA-202ENST00000336233 KBTBD3Q8NAB2 608 aa16.96■□□□□ 0.31
LIPA-202ENST00000336233 ATG3Q9NT62 314 aa16.96■□□□□ 0.31
LIPA-202ENST00000336233 TOGARAM1Q9Y4F4 1720 aa16.96■□□□□ 0.3
LIPA-202ENST00000336233 CCDC191Q8NCU4 936 aa16.95■□□□□ 0.3
LIPA-202ENST00000336233 DDX54Q8TDD1 881 aaKnown RBP16.95■□□□□ 0.3
LIPA-202ENST00000336233 ZKSCAN5Q9Y2L8 839 aa16.95■□□□□ 0.3
LIPA-202ENST00000336233 RRP9O43818 475 aaKnown RBP16.95■□□□□ 0.3
LIPA-202ENST00000336233 LARP1BQ659C4 914 aaKnown RBP16.95■□□□□ 0.3
LIPA-202ENST00000336233 OFD1O75665 1012 aa16.94■□□□□ 0.3
LIPA-202ENST00000336233 CIAO1O76071 339 aa16.94■□□□□ 0.3
LIPA-202ENST00000336233 IL15P40933 162 aaPredicted RBP16.94■□□□□ 0.3
LIPA-202ENST00000336233 RNF214Q8ND24 703 aa16.94■□□□□ 0.3
LIPA-202ENST00000336233 CARD10Q9BWT7 1032 aa16.94■□□□□ 0.3
LIPA-202ENST00000336233 VPS37CA5D8V6 355 aaPredicted RBP16.94■□□□□ 0.3
LIPA-202ENST00000336233 TTLL7Q6ZT98 887 aa16.94■□□□□ 0.3
LIPA-202ENST00000336233 FUCA2Q9BTY2 467 aa16.94■□□□□ 0.3
LIPA-202ENST00000336233 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
LIPA-202ENST00000336233 HELLSQ9NRZ9 838 aa16.94■□□□□ 0.3
LIPA-202ENST00000336233 TOM1L2Q6ZVM7 507 aa16.93■□□□□ 0.3
LIPA-202ENST00000336233 NEK1Q96PY6 1258 aa16.93■□□□□ 0.3
LIPA-202ENST00000336233 DNAJC2Q99543 621 aaKnown RBP16.93■□□□□ 0.3
LIPA-202ENST00000336233 LAMA4Q16363 1823 aa16.93■□□□□ 0.3
LIPA-202ENST00000336233 KRT85P78386 507 aa16.93■□□□□ 0.3
LIPA-202ENST00000336233 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.93■□□□□ 0.3
LIPA-202ENST00000336233 GTF3C6Q969F1 213 aa16.93■□□□□ 0.3
LIPA-202ENST00000336233 IL2RBP14784 551 aa16.92■□□□□ 0.3
LIPA-202ENST00000336233 CDC37L1Q7L3B6 337 aa16.92■□□□□ 0.3
LIPA-202ENST00000336233 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms