RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 CCDC24Q8N4L8 307 aa15.18■□□□□ 0.02
LIMK1-201ENST00000336180 LRRC2Q9BYS8 371 aa15.18■□□□□ 0.02
LIMK1-201ENST00000336180 ROBO1Q9Y6N7 1651 aa15.18■□□□□ 0.02
LIMK1-201ENST00000336180 AOX1Q06278 1338 aa15.18■□□□□ 0.02
LIMK1-201ENST00000336180 BAG4O95429 457 aaKnown RBP15.18■□□□□ 0.02
LIMK1-201ENST00000336180 ATP6V1AP38606 617 aa15.17■□□□□ 0.02
LIMK1-201ENST00000336180 RABL6Q3YEC7 729 aaPredicted RBP15.17■□□□□ 0.02
LIMK1-201ENST00000336180 CYP19A1P11511 503 aaPredicted RBP15.17■□□□□ 0.02
LIMK1-201ENST00000336180 STK3Q13188 491 aa15.17■□□□□ 0.02
LIMK1-201ENST00000336180 CCDC57Q2TAC2 916 aa15.17■□□□□ 0.02
LIMK1-201ENST00000336180 PANK2Q9BZ23 570 aa15.17■□□□□ 0.02
LIMK1-201ENST00000336180 TRMT112Q9UI30 125 aaKnown RBP15.17■□□□□ 0.02
LIMK1-201ENST00000336180 GREM2Q9H772 168 aa15.17■□□□□ 0.02
LIMK1-201ENST00000336180 GLI3P10071 1580 aa15.16■□□□□ 0.02
LIMK1-201ENST00000336180 GORABQ5T7V8 394 aa15.16■□□□□ 0.02
LIMK1-201ENST00000336180 BICDL1Q6ZP65 573 aa15.16■□□□□ 0.02
LIMK1-201ENST00000336180 A0A1B0GUL7 405 aa15.16■□□□□ 0.02
LIMK1-201ENST00000336180 PRPF40AO75400 957 aaKnown RBP15.16■□□□□ 0.02
LIMK1-201ENST00000336180 DZIP3Q86Y13 1208 aaKnown RBP15.16■□□□□ 0.02
LIMK1-201ENST00000336180 CCDC83Q8IWF9 413 aa15.16■□□□□ 0.02
LIMK1-201ENST00000336180 CCDC191Q8NCU4 936 aa15.16■□□□□ 0.02
LIMK1-201ENST00000336180 NGLY1Q96IV0 654 aa15.16■□□□□ 0.02
LIMK1-201ENST00000336180 GBP4Q96PP9 640 aa15.16■□□□□ 0.02
LIMK1-201ENST00000336180 ABCA3Q99758 1704 aa15.15■□□□□ 0.02
LIMK1-201ENST00000336180 VPS53Q5VIR6 699 aa15.15■□□□□ 0.02
LIMK1-201ENST00000336180 AFDNP55196 1824 aaKnown RBP15.15■□□□□ 0.02
LIMK1-201ENST00000336180 TOGARAM1Q9Y4F4 1720 aa15.15■□□□□ 0.02
LIMK1-201ENST00000336180 SCARF1Q14162 830 aa15.15■□□□□ 0.02
LIMK1-201ENST00000336180 RUFY3Q7L099 469 aa15.15■□□□□ 0.02
LIMK1-201ENST00000336180 RBM27Q9P2N5 1060 aaKnown RBP15.15■□□□□ 0.02
LIMK1-201ENST00000336180 CCDC171Q6TFL3 1326 aa15.15■□□□□ 0.02
LIMK1-201ENST00000336180 FOSBP53539 338 aa15.14■□□□□ 0.01
LIMK1-201ENST00000336180 CREB3L3Q68CJ9 461 aa15.14■□□□□ 0.01
LIMK1-201ENST00000336180 RUFY2Q8WXA3 655 aa15.14■□□□□ 0.01
LIMK1-201ENST00000336180 USP42Q9H9J4 1324 aaKnown RBP15.14■□□□□ 0.01
LIMK1-201ENST00000336180 N4BP2Q86UW6 1770 aaPredicted RBP15.14■□□□□ 0.01
LIMK1-201ENST00000336180 ITPK1Q13572 414 aa15.14■□□□□ 0.01
LIMK1-201ENST00000336180 ISCA1Q9BUE6 129 aa15.14■□□□□ 0.01
LIMK1-201ENST00000336180 DDX49Q9Y6V7 483 aaKnown RBP15.14■□□□□ 0.01
LIMK1-201ENST00000336180 COL15A1P39059 1388 aa15.14■□□□□ 0.01
LIMK1-201ENST00000336180 PARP4Q9UKK3 1724 aaKnown RBP15.14■□□□□ 0.01
LIMK1-201ENST00000336180 ARFGEF2Q9Y6D5 1785 aa15.14■□□□□ 0.01
LIMK1-201ENST00000336180 EYA2O00167 538 aa15.13■□□□□ 0.01
LIMK1-201ENST00000336180 CHST3Q7LGC8 479 aa15.13■□□□□ 0.01
LIMK1-201ENST00000336180 NLRP10Q86W26 655 aa15.13■□□□□ 0.01
LIMK1-201ENST00000336180 NSFL1CQ9UNZ2 370 aaKnown RBP15.13■□□□□ 0.01
LIMK1-201ENST00000336180 MAP3K15Q6ZN16 1313 aa15.13■□□□□ 0.01
LIMK1-201ENST00000336180 IRS4O14654 1257 aaPredicted RBP15.12■□□□□ 0.01
LIMK1-201ENST00000336180 ITGA6P23229 1130 aa15.12■□□□□ 0.01
LIMK1-201ENST00000336180 SPATA31A1Q5TZJ5 1347 aa15.12■□□□□ 0.01
LIMK1-201ENST00000336180 UBN2Q6ZU65 1347 aa15.12■□□□□ 0.01
LIMK1-201ENST00000336180 PDRG1Q9NUG6 133 aa15.12■□□□□ 0.01
LIMK1-201ENST00000336180 CEP126Q9P2H0 1117 aa15.12■□□□□ 0.01
LIMK1-201ENST00000336180 CIZ1Q9ULV3 898 aaPredicted RBP15.12■□□□□ 0.01
LIMK1-201ENST00000336180 NAP1L2Q9ULW6 460 aaPredicted RBP15.12■□□□□ 0.01
LIMK1-201ENST00000336180 SHANK3Q9BYB0 1731 aa15.12■□□□□ 0.01
LIMK1-201ENST00000336180 SLC27A2O14975 620 aa15.12■□□□□ 0.01
LIMK1-201ENST00000336180 IFIT1P09914 478 aaKnown RBP15.12■□□□□ 0.01
LIMK1-201ENST00000336180 IFIT5Q13325 482 aaKnown RBP15.12■□□□□ 0.01
LIMK1-201ENST00000336180 GIGYF2Q6Y7W6 1299 aaKnown RBP15.12■□□□□ 0.01
LIMK1-201ENST00000336180 LDHAL6AQ6ZMR3 332 aa15.12■□□□□ 0.01
LIMK1-201ENST00000336180 CNNM1Q9NRU3 951 aa15.12■□□□□ 0.01
LIMK1-201ENST00000336180 DDX11L8A8MPP1 907 aa15.11■□□□□ 0.01
LIMK1-201ENST00000336180 TAF5LO75529 589 aa15.11■□□□□ 0.01
LIMK1-201ENST00000336180 CRKLP46109 303 aaKnown RBP15.11■□□□□ 0.01
LIMK1-201ENST00000336180 GAS2L3Q86XJ1 694 aa15.11■□□□□ 0.01
LIMK1-201ENST00000336180 SEC31BQ9NQW1 1179 aa15.11■□□□□ 0.01
LIMK1-201ENST00000336180 NHSL1Q5SYE7 1610 aa15.11■□□□□ 0.01
LIMK1-201ENST00000336180 BCL9O00512 1426 aa15.11■□□□□ 0.01
LIMK1-201ENST00000336180 WTIPA6NIX2 430 aaPredicted RBP15.11■□□□□ 0.01
LIMK1-201ENST00000336180 METTL24Q5JXM2 366 aa15.11■□□□□ 0.01
LIMK1-201ENST00000336180 CAVIN1Q6NZI2 390 aaKnown RBP15.11■□□□□ 0.01
LIMK1-201ENST00000336180 ATP5JP18859 108 aa15.11■□□□□ 0.01
LIMK1-201ENST00000336180 TTLL5Q6EMB2 1281 aa15.11■□□□□ 0.01
LIMK1-201ENST00000336180 IQSEC3Q9UPP2 1182 aaPredicted RBP15.11■□□□□ 0.01
LIMK1-201ENST00000336180 TNS2Q63HR2 1409 aa15.1■□□□□ 0.01
LIMK1-201ENST00000336180 TUBGCP6Q96RT7 1819 aa15.1■□□□□ 0.01
LIMK1-201ENST00000336180 LOC102724428A0A0B4J2F2 783 aa15.1■□□□□ 0.01
LIMK1-201ENST00000336180 SIK1P57059 783 aa15.1■□□□□ 0.01
LIMK1-201ENST00000336180 ERBB4Q15303 1308 aa15.1■□□□□ 0.01
LIMK1-201ENST00000336180 HAND2P61296 217 aa15.1■□□□□ 0.01
LIMK1-201ENST00000336180 XAGE2Q96GT9 111 aa15.1■□□□□ 0.01
LIMK1-201ENST00000336180 PAG1Q9NWQ8 432 aa15.1■□□□□ 0.01
LIMK1-201ENST00000336180 IL15P40933 162 aaPredicted RBP15.09■□□□□ 0.01
LIMK1-201ENST00000336180 NECTIN1Q15223 517 aa15.09■□□□□ 0.01
LIMK1-201ENST00000336180 WASHC4Q2M389 1173 aa15.09■□□□□ 0.01
LIMK1-201ENST00000336180 RAB11FIP4Q86YS3 637 aa15.09■□□□□ 0.01
LIMK1-201ENST00000336180 ZNF609O15014 1411 aa15.09■□□□□ 0.01
LIMK1-201ENST00000336180 ANAPC15P60006 121 aa15.09■□□□□ 0.01
LIMK1-201ENST00000336180 TTC39AQ5SRH9 613 aa15.09■□□□□ 0.01
LIMK1-201ENST00000336180 SUSD4Q5VX71 490 aa15.09■□□□□ 0.01
LIMK1-201ENST00000336180 STK11IPQ8N1F8 1099 aa15.09■□□□□ 0.01
LIMK1-201ENST00000336180 ZBTB38Q8NAP3 1195 aaPredicted RBP15.09■□□□□ 0.01
LIMK1-201ENST00000336180 ZKSCAN1P17029 563 aaPredicted RBP15.09■□□□□ 0.01
LIMK1-201ENST00000336180 ZAP70P43403 619 aa15.09■□□□□ 0.01
LIMK1-201ENST00000336180 TTLL11Q8NHH1 800 aa15.09■□□□□ 0.01
LIMK1-201ENST00000336180 TTC14Q96N46 770 aa15.09■□□□□ 0.01
LIMK1-201ENST00000336180 CYP46A1Q9Y6A2 500 aa15.09■□□□□ 0.01
LIMK1-201ENST00000336180 NUCB2P80303 420 aa15.08■□□□□ 0.01
LIMK1-201ENST00000336180 ME3Q16798 604 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms