RNA–Protein interactions for RNA: ENST00000335295.4

HBB-201, Transcript of hemoglobin subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HBB, Length 628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBB-201ENST00000335295 TBC1D8O95759 1140 aa17.4■□□□□ 0.38
HBB-201ENST00000335295 ZNF296Q8WUU4 475 aaPredicted RBP17.4■□□□□ 0.38
HBB-201ENST00000335295 GCC1Q96CN9 775 aa17.4■□□□□ 0.38
HBB-201ENST00000335295 ABCC4O15439 1325 aa17.4■□□□□ 0.38
HBB-201ENST00000335295 ASTN2O75129 1339 aaPredicted RBP17.4■□□□□ 0.38
HBB-201ENST00000335295 MAP3K15Q6ZN16 1313 aa17.4■□□□□ 0.38
HBB-201ENST00000335295 FXR1P51114 621 aaKnown RBP eCLIP17.39■□□□□ 0.37
HBB-201ENST00000335295 TNIP1Q15025 636 aa17.39■□□□□ 0.37
HBB-201ENST00000335295 RBM26Q5T8P6 1007 aaKnown RBP17.39■□□□□ 0.37
HBB-201ENST00000335295 DPP8Q6V1X1 898 aaPredicted RBP17.39■□□□□ 0.37
HBB-201ENST00000335295 RASAL3Q86YV0 1011 aa17.39■□□□□ 0.37
HBB-201ENST00000335295 ZBTB3Q9H5J0 574 aa17.39■□□□□ 0.37
HBB-201ENST00000335295 MIS18AQ9NYP9 233 aa17.39■□□□□ 0.37
HBB-201ENST00000335295 ERVV-1B6SEH8 477 aa17.38■□□□□ 0.37
HBB-201ENST00000335295 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
HBB-201ENST00000335295 ZNF34Q8IZ26 560 aa17.38■□□□□ 0.37
HBB-201ENST00000335295 SUPT20HQ8NEM7 779 aa17.38■□□□□ 0.37
HBB-201ENST00000335295 KCNQ5Q9NR82 932 aa17.38■□□□□ 0.37
HBB-201ENST00000335295 PSMD14O00487 310 aa17.37■□□□□ 0.37
HBB-201ENST00000335295 PRKAR2BP31323 418 aa17.37■□□□□ 0.37
HBB-201ENST00000335295 MPNDQ8N594 471 aa17.37■□□□□ 0.37
HBB-201ENST00000335295 HDAC9Q9UKV0 1011 aa17.37■□□□□ 0.37
HBB-201ENST00000335295 SP8Q8IXZ3 490 aa17.36■□□□□ 0.37
HBB-201ENST00000335295 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
HBB-201ENST00000335295 RRP7AQ9Y3A4 280 aaKnown RBP17.36■□□□□ 0.37
HBB-201ENST00000335295 IBTKQ9P2D0 1353 aaPredicted RBP17.36■□□□□ 0.37
HBB-201ENST00000335295 AKAP11Q9UKA4 1901 aa17.35■□□□□ 0.37
HBB-201ENST00000335295 MYL6BP14649 208 aa17.35■□□□□ 0.37
HBB-201ENST00000335295 CNGB1Q14028 1251 aaPredicted RBP17.35■□□□□ 0.37
HBB-201ENST00000335295 PKN2Q16513 984 aaKnown RBP17.35■□□□□ 0.37
HBB-201ENST00000335295 MOB2Q70IA6 237 aa17.35■□□□□ 0.37
HBB-201ENST00000335295 NLRP3Q96P20 1036 aa17.35■□□□□ 0.37
HBB-201ENST00000335295 RSPH6AQ9H0K4 717 aa17.35■□□□□ 0.37
HBB-201ENST00000335295 DUOX1Q9NRD9 1551 aa17.35■□□□□ 0.37
HBB-201ENST00000335295 NUP98P52948 1817 aa17.35■□□□□ 0.37
HBB-201ENST00000335295 POTEFA5A3E0 1075 aa17.34■□□□□ 0.37
HBB-201ENST00000335295 POLR2AP24928 1970 aaKnown RBP17.34■□□□□ 0.37
HBB-201ENST00000335295 MKI67P46013 3256 aaKnown RBP17.34■□□□□ 0.37
HBB-201ENST00000335295 EIF4G2P78344 907 aaKnown RBP eCLIP17.34■□□□□ 0.37
HBB-201ENST00000335295 DPF2Q92785 391 aa17.34■□□□□ 0.37
HBB-201ENST00000335295 DCPSQ96C86 337 aaKnown RBP17.34■□□□□ 0.37
HBB-201ENST00000335295 CDCA5Q96FF9 252 aa17.34■□□□□ 0.37
HBB-201ENST00000335295 R3HDMLQ9H3Y0 253 aa17.34■□□□□ 0.37
HBB-201ENST00000335295 DBNDD1Q9H9R9 158 aa17.34■□□□□ 0.37
HBB-201ENST00000335295 SLC10A5Q5PT55 438 aa17.33■□□□□ 0.36
HBB-201ENST00000335295 TMX4Q9H1E5 349 aaPredicted RBP17.33■□□□□ 0.36
HBB-201ENST00000335295 SCAF8Q9UPN6 1271 aaKnown RBP17.33■□□□□ 0.36
HBB-201ENST00000335295 RTL9Q8NET4 1388 aa17.32■□□□□ 0.36
HBB-201ENST00000335295 PER1O15534 1290 aaPredicted RBP17.32■□□□□ 0.36
HBB-201ENST00000335295 FBXO46Q6PJ61 603 aaPredicted RBP17.32■□□□□ 0.36
HBB-201ENST00000335295 KIF6Q6ZMV9 814 aa17.32■□□□□ 0.36
HBB-201ENST00000335295 GGA3Q9NZ52 723 aa17.32■□□□□ 0.36
HBB-201ENST00000335295 GPR25O00155 361 aa17.31■□□□□ 0.36
HBB-201ENST00000335295 BBOX1O75936 387 aa17.31■□□□□ 0.36
HBB-201ENST00000335295 HCLS1P14317 486 aaPredicted RBP17.31■□□□□ 0.36
HBB-201ENST00000335295 GIGYF2Q6Y7W6 1299 aaKnown RBP17.31■□□□□ 0.36
HBB-201ENST00000335295 RIMBP2O15034 1052 aa17.3■□□□□ 0.36
HBB-201ENST00000335295 KIF4BQ2VIQ3 1234 aa17.3■□□□□ 0.36
HBB-201ENST00000335295 DOK7Q18PE1 504 aa17.29■□□□□ 0.36
HBB-201ENST00000335295 PPP1R42Q7Z4L9 355 aa17.29■□□□□ 0.36
HBB-201ENST00000335295 RTF1Q92541 710 aaKnown RBP17.29■□□□□ 0.36
HBB-201ENST00000335295 ZNF428Q96B54 188 aa17.29■□□□□ 0.36
HBB-201ENST00000335295 UBE2Q2LH0YL09 131 aa17.28■□□□□ 0.36
HBB-201ENST00000335295 MKRN3Q13064 507 aaKnown RBP17.28■□□□□ 0.36
HBB-201ENST00000335295 TAF7Q15545 349 aaPredicted RBP17.28■□□□□ 0.36
HBB-201ENST00000335295 SULF1Q8IWU6 871 aa17.28■□□□□ 0.36
HBB-201ENST00000335295 THUMPD2Q9BTF0 503 aaKnown RBP17.28■□□□□ 0.36
HBB-201ENST00000335295 UTP14AQ9BVJ6 771 aaKnown RBP17.28■□□□□ 0.36
HBB-201ENST00000335295 GRAPQ13588 217 aa17.27■□□□□ 0.36
HBB-201ENST00000335295 WASHC4Q2M389 1173 aa17.27■□□□□ 0.36
HBB-201ENST00000335295 PRAMEF18Q5VWM3 479 aa17.27■□□□□ 0.36
HBB-201ENST00000335295 REM2Q8IYK8 340 aaPredicted RBP17.27■□□□□ 0.36
HBB-201ENST00000335295 GRAPLQ8TC17 118 aaPredicted RBP17.27■□□□□ 0.36
HBB-201ENST00000335295 POLLQ9UGP5 575 aa17.27■□□□□ 0.36
HBB-201ENST00000335295 COLQQ9Y215 455 aaPredicted RBP17.27■□□□□ 0.36
HBB-201ENST00000335295 LAMB4A4D0S4 1761 aa17.27■□□□□ 0.35
HBB-201ENST00000335295 TAF1P21675 1872 aa17.27■□□□□ 0.35
HBB-201ENST00000335295 COL4A1P02462 1669 aa17.26■□□□□ 0.35
HBB-201ENST00000335295 ECE2O60344 883 aa17.26■□□□□ 0.35
HBB-201ENST00000335295 PARP10Q53GL7 1025 aa17.26■□□□□ 0.35
HBB-201ENST00000335295 ANGEL2Q5VTE6 544 aaKnown RBP17.26■□□□□ 0.35
HBB-201ENST00000335295 LRP10Q7Z4F1 713 aa17.26■□□□□ 0.35
HBB-201ENST00000335295 TM4SF4P48230 202 aa17.25■□□□□ 0.35
HBB-201ENST00000335295 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
HBB-201ENST00000335295 SCARF1Q14162 830 aa17.25■□□□□ 0.35
HBB-201ENST00000335295 RNF216Q9NWF9 866 aaPredicted RBP17.25■□□□□ 0.35
HBB-201ENST00000335295 LAMB2P55268 1798 aa17.25■□□□□ 0.35
HBB-201ENST00000335295 ANXA1P04083 346 aa17.24■□□□□ 0.35
HBB-201ENST00000335295 EN2P19622 333 aaPredicted RBP17.24■□□□□ 0.35
HBB-201ENST00000335295 RPS12P25398 132 aaKnown RBP17.24■□□□□ 0.35
HBB-201ENST00000335295 GPSM2P81274 684 aa17.24■□□□□ 0.35
HBB-201ENST00000335295 DDX46Q7L014 1031 aaKnown RBP17.24■□□□□ 0.35
HBB-201ENST00000335295 NSFL1CQ9UNZ2 370 aaKnown RBP17.24■□□□□ 0.35
HBB-201ENST00000335295 FKTNO75072 461 aa17.23■□□□□ 0.35
HBB-201ENST00000335295 CACNB1Q02641 598 aaPredicted RBP17.23■□□□□ 0.35
HBB-201ENST00000335295 PDIA6Q15084 440 aa17.23■□□□□ 0.35
HBB-201ENST00000335295 PROSER3Q2NL68 480 aa17.23■□□□□ 0.35
HBB-201ENST00000335295 CELF1Q92879 486 aaKnown RBP17.23■□□□□ 0.35
HBB-201ENST00000335295 SZT2Q5T011 3432 aa17.22■□□□□ 0.35
HBB-201ENST00000335295 HTTP42858 3142 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms