RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 PCDHB15Q9Y5E8 787 aa21.92■■□□□ 1.1
CHGA-202ENST00000334654 COL4A1P02462 1669 aa21.92■■□□□ 1.1
CHGA-202ENST00000334654 PDE6BP35913 854 aa21.91■■□□□ 1.1
CHGA-202ENST00000334654 CEP85Q6P2H3 762 aa21.91■■□□□ 1.1
CHGA-202ENST00000334654 SIRT2Q8IXJ6 389 aa21.91■■□□□ 1.1
CHGA-202ENST00000334654 SRGNP10124 158 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 ATP8B2P98198 1209 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 AAMPQ13685 434 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 CCDC85AQ96PX6 553 aaPredicted RBP21.9■■□□□ 1.1
CHGA-202ENST00000334654 GREM2Q9H772 168 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 CD2APQ9Y5K6 639 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 SRCAPQ6ZRS2 3230 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 RTL9Q8NET4 1388 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 PNMA6EA0A0J9YXQ4 647 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 FAM161AQ3B820 660 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 SEC31BQ9NQW1 1179 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 LRP5O75197 1615 aa21.89■■□□□ 1.1
CHGA-202ENST00000334654 DLEC1Q9Y238 1755 aa21.89■■□□□ 1.09
CHGA-202ENST00000334654 KCNA3P22001 575 aa21.89■■□□□ 1.09
CHGA-202ENST00000334654 CHRNA5P30532 468 aa21.89■■□□□ 1.09
CHGA-202ENST00000334654 HOXA10P31260 410 aaPredicted RBP21.89■■□□□ 1.09
CHGA-202ENST00000334654 RFX5P48382 616 aaPredicted RBP21.89■■□□□ 1.09
CHGA-202ENST00000334654 CCDC152Q4G0S7 254 aa21.89■■□□□ 1.09
CHGA-202ENST00000334654 NEFLP07196 543 aa21.88■■□□□ 1.09
CHGA-202ENST00000334654 C2CD5Q86YS7 1000 aa21.88■■□□□ 1.09
CHGA-202ENST00000334654 TGFB2P61812 414 aa21.87■■□□□ 1.09
CHGA-202ENST00000334654 POLA2Q14181 598 aa21.87■■□□□ 1.09
CHGA-202ENST00000334654 RPAP2Q8IXW5 612 aaPredicted RBP21.87■■□□□ 1.09
CHGA-202ENST00000334654 SSH3Q8TE77 659 aa21.87■■□□□ 1.09
CHGA-202ENST00000334654 PDZRN3Q9UPQ7 1066 aa21.87■■□□□ 1.09
CHGA-202ENST00000334654 A0A0G2JLW4 131 aa21.86■■□□□ 1.09
CHGA-202ENST00000334654 H0YIN7 160 aa21.86■■□□□ 1.09
CHGA-202ENST00000334654 NPR1P16066 1061 aa21.86■■□□□ 1.09
CHGA-202ENST00000334654 DPEP1P16444 411 aa21.86■■□□□ 1.09
CHGA-202ENST00000334654 ITGA6P23229 1130 aa21.86■■□□□ 1.09
CHGA-202ENST00000334654 FHDC1Q9C0D6 1143 aaPredicted RBP21.86■■□□□ 1.09
CHGA-202ENST00000334654 SRGAP3O43295 1099 aa21.85■■□□□ 1.09
CHGA-202ENST00000334654 MASTLQ96GX5 879 aa21.85■■□□□ 1.09
CHGA-202ENST00000334654 CRAMP1Q96RY5 1269 aa21.85■■□□□ 1.09
CHGA-202ENST00000334654 PPP1R1BQ9UD71 204 aaPredicted RBP21.85■■□□□ 1.09
CHGA-202ENST00000334654 CHMP3Q9Y3E7 222 aa21.85■■□□□ 1.09
CHGA-202ENST00000334654 BRCA1P38398 1863 aaKnown RBP21.85■■□□□ 1.09
CHGA-202ENST00000334654 STYK1Q6J9G0 422 aa21.84■■□□□ 1.09
CHGA-202ENST00000334654 NLGN2Q8NFZ4 835 aa21.84■■□□□ 1.09
CHGA-202ENST00000334654 RPGRQ92834 1020 aaKnown RBP21.84■■□□□ 1.09
CHGA-202ENST00000334654 CELF1Q92879 486 aaKnown RBP21.84■■□□□ 1.09
CHGA-202ENST00000334654 PTPN12Q05209 780 aaKnown RBP21.83■■□□□ 1.09
CHGA-202ENST00000334654 IFIT5Q13325 482 aaKnown RBP21.83■■□□□ 1.09
CHGA-202ENST00000334654 DDX46Q7L014 1031 aaKnown RBP21.83■■□□□ 1.09
CHGA-202ENST00000334654 KLHL34Q8N239 644 aa21.83■■□□□ 1.09
CHGA-202ENST00000334654 KLHDC4Q8TBB5 520 aa21.83■■□□□ 1.09
CHGA-202ENST00000334654 RBM17Q96I25 401 aaKnown RBP21.83■■□□□ 1.09
CHGA-202ENST00000334654 ZNF594Q96JF6 807 aaPredicted RBP21.83■■□□□ 1.09
CHGA-202ENST00000334654 ANKRD18BA2A2Z9 1011 aa21.83■■□□□ 1.08
CHGA-202ENST00000334654 CCDC57Q2TAC2 916 aa21.83■■□□□ 1.08
CHGA-202ENST00000334654 SLX4Q8IY92 1834 aa21.83■■□□□ 1.08
CHGA-202ENST00000334654 CACNA1SQ13698 1873 aa21.82■■□□□ 1.08
CHGA-202ENST00000334654 SPEF2Q9C093 1822 aa21.82■■□□□ 1.08
CHGA-202ENST00000334654 GRAPQ13588 217 aa21.82■■□□□ 1.08
CHGA-202ENST00000334654 GRAPLQ8TC17 118 aaPredicted RBP21.82■■□□□ 1.08
CHGA-202ENST00000334654 SYT17Q9BSW7 474 aa21.82■■□□□ 1.08
CHGA-202ENST00000334654 PA2G4Q9UQ80 394 aaKnown RBP21.82■■□□□ 1.08
CHGA-202ENST00000334654 RPS8P62241 208 aaKnown RBP21.81■■□□□ 1.08
CHGA-202ENST00000334654 ZNF622Q969S3 477 aaKnown RBP eCLIP21.81■■□□□ 1.08
CHGA-202ENST00000334654 COPRSQ9NQ92 184 aa21.81■■□□□ 1.08
CHGA-202ENST00000334654 ERICH6BQ5W0A0 696 aa21.8■■□□□ 1.08
CHGA-202ENST00000334654 SLC51AQ86UW1 340 aa21.8■■□□□ 1.08
CHGA-202ENST00000334654 PUS3Q9BZE2 481 aaKnown RBP21.8■■□□□ 1.08
CHGA-202ENST00000334654 ALDH1B1P30837 517 aa21.79■■□□□ 1.08
CHGA-202ENST00000334654 CDC5LQ99459 802 aaKnown RBP21.79■■□□□ 1.08
CHGA-202ENST00000334654 IGHDP01880 384 aa21.78■■□□□ 1.08
CHGA-202ENST00000334654 HDAC1Q13547 482 aaPredicted RBP21.78■■□□□ 1.08
CHGA-202ENST00000334654 ANKRD18AQ8IVF6 992 aa21.78■■□□□ 1.08
CHGA-202ENST00000334654 CNKSR1Q969H4 720 aa21.78■■□□□ 1.08
CHGA-202ENST00000334654 NOP58Q9Y2X3 529 aaKnown RBP21.78■■□□□ 1.08
CHGA-202ENST00000334654 BBOX1O75936 387 aa21.77■■□□□ 1.08
CHGA-202ENST00000334654 LRRC24Q50LG9 513 aa21.77■■□□□ 1.08
CHGA-202ENST00000334654 ATG9AQ7Z3C6 839 aa21.77■■□□□ 1.08
CHGA-202ENST00000334654 C7orf43Q8WVR3 580 aa21.77■■□□□ 1.08
CHGA-202ENST00000334654 BSDC1Q9NW68 430 aaPredicted RBP21.77■■□□□ 1.08
CHGA-202ENST00000334654 HMMRO75330 724 aa21.77■■□□□ 1.07
CHGA-202ENST00000334654 PRPF40BQ6NWY9 871 aaKnown RBP21.77■■□□□ 1.07
CHGA-202ENST00000334654 TTLL6Q8N841 843 aa21.77■■□□□ 1.07
CHGA-202ENST00000334654 PIM2Q9P1W9 311 aa21.77■■□□□ 1.07
CHGA-202ENST00000334654 RIPOR2Q9Y4F9 1068 aa21.77■■□□□ 1.07
CHGA-202ENST00000334654 LDHAL6AQ6ZMR3 332 aa21.76■■□□□ 1.07
CHGA-202ENST00000334654 LRRC37AA6NMS7 1700 aa21.75■■□□□ 1.07
CHGA-202ENST00000334654 EYA2O00167 538 aa21.75■■□□□ 1.07
CHGA-202ENST00000334654 IGHMBP2P38935 993 aaKnown RBP21.75■■□□□ 1.07
CHGA-202ENST00000334654 TAF7LQ5H9L4 462 aa21.75■■□□□ 1.07
CHGA-202ENST00000334654 SIL1Q9H173 461 aa21.75■■□□□ 1.07
CHGA-202ENST00000334654 DCTPP1Q9H773 170 aa21.75■■□□□ 1.07
CHGA-202ENST00000334654 FBXO3Q9UK99 471 aa21.75■■□□□ 1.07
CHGA-202ENST00000334654 A0A1B0GUL6 1792 aa21.74■■□□□ 1.07
CHGA-202ENST00000334654 PPEF1O14829 653 aaPredicted RBP21.74■■□□□ 1.07
CHGA-202ENST00000334654 SURF6O75683 361 aaKnown RBP21.74■■□□□ 1.07
CHGA-202ENST00000334654 CIAO1O76071 339 aa21.74■■□□□ 1.07
CHGA-202ENST00000334654 MPHOSPH8Q99549 860 aa21.74■■□□□ 1.07
CHGA-202ENST00000334654 OLFM4Q6UX06 510 aa21.73■■□□□ 1.07
CHGA-202ENST00000334654 MINPP1Q9UNW1 487 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms