RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ZNF530Q6P9A1 599 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-201ENST00000334504 TOM1L2Q6ZVM7 507 aa11.18□□□□□ -0.62
COL4A6-201ENST00000334504 RAB11FIP4Q86YS3 637 aa11.18□□□□□ -0.62
COL4A6-201ENST00000334504 ZSCAN16Q9H4T2 348 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-201ENST00000334504 FAM114A2Q9NRY5 505 aa11.18□□□□□ -0.62
COL4A6-201ENST00000334504 MIS18AQ9NYP9 233 aa11.18□□□□□ -0.62
COL4A6-201ENST00000334504 AFMP43652 599 aa11.18□□□□□ -0.62
COL4A6-201ENST00000334504 POTEDQ86YR6 584 aa11.18□□□□□ -0.62
COL4A6-201ENST00000334504 ARFGAP2Q8N6H7 521 aa11.18□□□□□ -0.62
COL4A6-201ENST00000334504 TTC16Q8NEE8 873 aa11.18□□□□□ -0.62
COL4A6-201ENST00000334504 DNAI2Q9GZS0 605 aa11.18□□□□□ -0.62
COL4A6-201ENST00000334504 A0A087WZG4 1122 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 BMP2KLQ5H9B9 411 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 DACT1Q9NYF0 836 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 WDR97A6NE52 1622 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 ACTN2P35609 894 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 EVCP57679 992 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 NFE2L2Q16236 605 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 CFAP58Q5T655 872 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 NECAB1Q8N987 351 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 PPP1R12CQ9BZL4 782 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 ABCF2Q9UG63 623 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 GUCA1BQ9UMX6 200 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 LUC7L2Q9Y383 392 aaKnown RBP11.17□□□□□ -0.62
COL4A6-201ENST00000334504 LRPPRCP42704 1394 aaKnown RBP11.17□□□□□ -0.62
COL4A6-201ENST00000334504 TLDC2A0PJX2 215 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 TATP17735 454 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-201ENST00000334504 TUBB4BP68371 445 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 TYRO3Q06418 890 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 EXOC1Q9NV70 894 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 ORC3Q9UBD5 711 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-201ENST00000334504 RANBP6O60518 1105 aaKnown RBP11.17□□□□□ -0.62
COL4A6-201ENST00000334504 PPP2R3AQ06190 1150 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 GABPB1Q06547 395 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-201ENST00000334504 ALDH1L2Q3SY69 923 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 ERO1AQ96HE7 468 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 ANKRD50Q9ULJ7 1429 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 RMND1Q9NWS8 449 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 CIB2O75838 187 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 ADAMTS2O95450 1211 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 METTL24Q5JXM2 366 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 INTS8Q75QN2 995 aaKnown RBP11.17□□□□□ -0.62
COL4A6-201ENST00000334504 PYM1Q9BRP8 204 aaKnown RBP11.17□□□□□ -0.62
COL4A6-201ENST00000334504 TCP11L1Q9NUJ3 509 aa11.17□□□□□ -0.62
COL4A6-201ENST00000334504 GBP1P32455 592 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 TTC22Q5TAA0 569 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 RAB3IL1Q8TBN0 382 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 GPRASP1Q5JY77 1395 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
COL4A6-201ENST00000334504 MAP7D1Q3KQU3 841 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 CEP85LQ5SZL2 805 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 UBLCP1Q8WVY7 318 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-201ENST00000334504 RABEP2Q9H5N1 569 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 PLEKHH2Q8IVE3 1493 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 IARSP41252 1262 aaKnown RBP11.16□□□□□ -0.62
COL4A6-201ENST00000334504 KRT83P78385 493 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 PPP4R3AQ6IN85 833 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 CACNA2D3Q8IZS8 1091 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 RGS22Q8NE09 1264 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 THUMPD2Q9BTF0 503 aaKnown RBP11.16□□□□□ -0.62
COL4A6-201ENST00000334504 TRIM7Q9C029 511 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 TMEM110-MUSTN1A8MSY1 372 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 DUSP27Q5VZP5 1158 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 MKNK2Q9HBH9 465 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 MAP2K2P36507 400 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 TBC1D5Q92609 795 aa11.16□□□□□ -0.62
COL4A6-201ENST00000334504 ATAD2BQ9ULI0 1458 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 KRT86O43790 486 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 FCHSD2O94868 740 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 VIMP08670 466 aaKnown RBP11.15□□□□□ -0.62
COL4A6-201ENST00000334504 IFT74Q96LB3 600 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 PRAM1Q96QH2 718 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 BANK1Q8NDB2 785 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 MRPS27Q92552 414 aaKnown RBP11.15□□□□□ -0.62
COL4A6-201ENST00000334504 PLVAPQ9BX97 442 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 AKAP2Q9Y2D5 859 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 LMOD1P29536 600 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-201ENST00000334504 HPDP32754 393 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-201ENST00000334504 VAV2P52735 878 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 DNM1Q05193 864 aaKnown RBP11.15□□□□□ -0.62
COL4A6-201ENST00000334504 SEPT14Q6ZU15 432 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 GSTA5Q7RTV2 222 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 EVI5LQ96CN4 794 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 NEK1Q96PY6 1258 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 RFC1P35251 1148 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-201ENST00000334504 KIF5AQ12840 1032 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 CCDC50Q8IVM0 306 aa11.15□□□□□ -0.62
COL4A6-201ENST00000334504 DHX29Q7Z478 1369 aaKnown RBP11.15□□□□□ -0.62
COL4A6-201ENST00000334504 NDUFAB1O14561 156 aa11.15□□□□□ -0.63
COL4A6-201ENST00000334504 TSHZ3Q63HK5 1081 aa11.15□□□□□ -0.63
COL4A6-201ENST00000334504 SLC26A6Q9BXS9 759 aa11.15□□□□□ -0.63
COL4A6-201ENST00000334504 ARHGAP5Q13017 1502 aa11.14□□□□□ -0.63
COL4A6-201ENST00000334504 F13A1P00488 732 aa11.14□□□□□ -0.63
COL4A6-201ENST00000334504 CDK19Q9BWU1 502 aa11.14□□□□□ -0.63
COL4A6-201ENST00000334504 LRRC9Q6ZRR7 1453 aa11.14□□□□□ -0.63
COL4A6-201ENST00000334504 MAP3K9P80192 1104 aa11.14□□□□□ -0.63
COL4A6-201ENST00000334504 PDE1CQ14123 709 aaPredicted RBP11.14□□□□□ -0.63
COL4A6-201ENST00000334504 CATIPQ7Z7H3 387 aa11.14□□□□□ -0.63
COL4A6-201ENST00000334504 CABP1Q9NZU7 370 aa11.14□□□□□ -0.63
COL4A6-201ENST00000334504 IFNKQ9P0W0 207 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms