RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 METAP2P50579 478 aaKnown RBP eCLIP17.48■□□□□ 0.39
C9orf47-201ENST00000334490 SPC24Q8NBT2 197 aa17.48■□□□□ 0.39
C9orf47-201ENST00000334490 CCDC87Q9NVE4 849 aa17.48■□□□□ 0.39
C9orf47-201ENST00000334490 TRIM35Q9UPQ4 493 aa17.48■□□□□ 0.39
C9orf47-201ENST00000334490 BRF1Q92994 677 aa17.47■□□□□ 0.39
C9orf47-201ENST00000334490 ZBTB40Q9NUA8 1239 aa17.47■□□□□ 0.39
C9orf47-201ENST00000334490 EYA3Q99504 573 aa17.47■□□□□ 0.39
C9orf47-201ENST00000334490 PPFIBP1Q86W92 1011 aa17.47■□□□□ 0.39
C9orf47-201ENST00000334490 ESR2Q92731 530 aa17.47■□□□□ 0.39
C9orf47-201ENST00000334490 RAB34Q9BZG1 259 aa17.47■□□□□ 0.39
C9orf47-201ENST00000334490 TTC37Q6PGP7 1564 aa17.47■□□□□ 0.39
C9orf47-201ENST00000334490 TSPY3P0CV98 308 aa17.47■□□□□ 0.39
C9orf47-201ENST00000334490 TSPY8P0CW00 308 aa17.47■□□□□ 0.39
C9orf47-201ENST00000334490 WTAPQ15007 396 aa17.46■□□□□ 0.39
C9orf47-201ENST00000334490 CCDC191Q8NCU4 936 aa17.46■□□□□ 0.39
C9orf47-201ENST00000334490 CCDC12Q8WUD4 166 aaPredicted RBP17.46■□□□□ 0.39
C9orf47-201ENST00000334490 TCEANC2Q96MN5 208 aa17.46■□□□□ 0.39
C9orf47-201ENST00000334490 RBM8AQ9Y5S9 174 aaKnown RBP17.46■□□□□ 0.39
C9orf47-201ENST00000334490 IBSPP21815 317 aaPredicted RBP17.46■□□□□ 0.39
C9orf47-201ENST00000334490 MATR3P43243 847 aaKnown RBP eCLIP17.46■□□□□ 0.39
C9orf47-201ENST00000334490 GPS2Q13227 327 aa17.46■□□□□ 0.39
C9orf47-201ENST00000334490 TBC1D2Q9BYX2 928 aa17.46■□□□□ 0.39
C9orf47-201ENST00000334490 JAG2Q9Y219 1238 aa17.46■□□□□ 0.39
C9orf47-201ENST00000334490 RBM26Q5T8P6 1007 aaKnown RBP17.46■□□□□ 0.39
C9orf47-201ENST00000334490 KRT23Q9C075 422 aa17.46■□□□□ 0.39
C9orf47-201ENST00000334490 UGGT1Q9NYU2 1555 aa17.46■□□□□ 0.38
C9orf47-201ENST00000334490 LRRC2Q9BYS8 371 aa17.45■□□□□ 0.38
C9orf47-201ENST00000334490 APBA3O96018 575 aa17.45■□□□□ 0.38
C9orf47-201ENST00000334490 SLC26A6Q9BXS9 759 aa17.45■□□□□ 0.38
C9orf47-201ENST00000334490 VEZTQ9HBM0 779 aa17.45■□□□□ 0.38
C9orf47-201ENST00000334490 TTC41PQ6P2S7 1318 aa17.45■□□□□ 0.38
C9orf47-201ENST00000334490 KLF18A0A0U1RQI7 1052 aa17.45■□□□□ 0.38
C9orf47-201ENST00000334490 ESYT1Q9BSJ8 1104 aa17.45■□□□□ 0.38
C9orf47-201ENST00000334490 CLEC11AQ9Y240 323 aa17.45■□□□□ 0.38
C9orf47-201ENST00000334490 ITGA6P23229 1130 aa17.45■□□□□ 0.38
C9orf47-201ENST00000334490 CCDC173Q0VFZ6 552 aa17.45■□□□□ 0.38
C9orf47-201ENST00000334490 CAMK4Q16566 473 aa17.45■□□□□ 0.38
C9orf47-201ENST00000334490 TMEM266Q2M3C6 531 aa17.45■□□□□ 0.38
C9orf47-201ENST00000334490 FAM43AQ8N2R8 423 aa17.45■□□□□ 0.38
C9orf47-201ENST00000334490 RBM17Q96I25 401 aaKnown RBP17.45■□□□□ 0.38
C9orf47-201ENST00000334490 MAGEB6P1A0A0J9YX57 407 aa17.44■□□□□ 0.38
C9orf47-201ENST00000334490 MAP3K11Q16584 847 aa17.44■□□□□ 0.38
C9orf47-201ENST00000334490 MIGA1Q8NAN2 632 aa17.44■□□□□ 0.38
C9orf47-201ENST00000334490 GJB2P29033 226 aa17.44■□□□□ 0.38
C9orf47-201ENST00000334490 KDM5DQ9BY66 1539 aa17.44■□□□□ 0.38
C9orf47-201ENST00000334490 ERVV-2B6SEH9 535 aa17.44■□□□□ 0.38
C9orf47-201ENST00000334490 EYA2O00167 538 aa17.44■□□□□ 0.38
C9orf47-201ENST00000334490 DEF6Q9H4E7 631 aa17.44■□□□□ 0.38
C9orf47-201ENST00000334490 ZCCHC11Q5TAX3 1644 aaKnown RBP17.43■□□□□ 0.38
C9orf47-201ENST00000334490 TIMM10P62072 90 aa17.43■□□□□ 0.38
C9orf47-201ENST00000334490 NMIQ13287 307 aaPredicted RBP17.43■□□□□ 0.38
C9orf47-201ENST00000334490 MPNDQ8N594 471 aa17.43■□□□□ 0.38
C9orf47-201ENST00000334490 CNNM2Q9H8M5 875 aa17.43■□□□□ 0.38
C9orf47-201ENST00000334490 EHMT1Q9H9B1 1298 aa17.43■□□□□ 0.38
C9orf47-201ENST00000334490 ERCC6L2Q5T890 1561 aa17.43■□□□□ 0.38
C9orf47-201ENST00000334490 CAGE1Q8TC20 777 aa17.43■□□□□ 0.38
C9orf47-201ENST00000334490 MYCNP04198 464 aaPredicted RBP17.43■□□□□ 0.38
C9orf47-201ENST00000334490 LDHBP07195 334 aaKnown RBP17.43■□□□□ 0.38
C9orf47-201ENST00000334490 SCLT1Q96NL6 688 aa17.43■□□□□ 0.38
C9orf47-201ENST00000334490 TFIP11Q9UBB9 837 aaKnown RBP17.43■□□□□ 0.38
C9orf47-201ENST00000334490 ZBTB43O43298 467 aa17.42■□□□□ 0.38
C9orf47-201ENST00000334490 PDE8AO60658 829 aa17.42■□□□□ 0.38
C9orf47-201ENST00000334490 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
C9orf47-201ENST00000334490 MAGEB6Q8N7X4 407 aa17.42■□□□□ 0.38
C9orf47-201ENST00000334490 ADGBQ8N7X0 1667 aa17.42■□□□□ 0.38
C9orf47-201ENST00000334490 USP19O94966 1318 aa17.42■□□□□ 0.38
C9orf47-201ENST00000334490 RNF113AO15541 343 aaKnown RBP17.42■□□□□ 0.38
C9orf47-201ENST00000334490 IFIT1BQ5T764 474 aaKnown RBP17.42■□□□□ 0.38
C9orf47-201ENST00000334490 TMTC2Q8N394 836 aa17.42■□□□□ 0.38
C9orf47-201ENST00000334490 CCDC24Q8N4L8 307 aa17.42■□□□□ 0.38
C9orf47-201ENST00000334490 MCM9Q9NXL9 1143 aa17.42■□□□□ 0.38
C9orf47-201ENST00000334490 ZBTB7BO15156 539 aaPredicted RBP17.42■□□□□ 0.38
C9orf47-201ENST00000334490 PHKG2P15735 406 aa17.42■□□□□ 0.38
C9orf47-201ENST00000334490 PLCG2P16885 1265 aa17.42■□□□□ 0.38
C9orf47-201ENST00000334490 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
C9orf47-201ENST00000334490 TRMT1LQ7Z2T5 733 aaKnown RBP17.41■□□□□ 0.38
C9orf47-201ENST00000334490 NLRP1Q9C000 1473 aa17.41■□□□□ 0.38
C9orf47-201ENST00000334490 ROBO2Q9HCK4 1378 aa17.41■□□□□ 0.38
C9orf47-201ENST00000334490 UFL1O94874 794 aa17.41■□□□□ 0.38
C9orf47-201ENST00000334490 KLHDC4Q8TBB5 520 aa17.41■□□□□ 0.38
C9orf47-201ENST00000334490 CBFA2T2O43439 604 aa17.41■□□□□ 0.38
C9orf47-201ENST00000334490 SSFA2P28290 1259 aa17.41■□□□□ 0.38
C9orf47-201ENST00000334490 NOM1Q5C9Z4 860 aaKnown RBP17.41■□□□□ 0.38
C9orf47-201ENST00000334490 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.41■□□□□ 0.38
C9orf47-201ENST00000334490 STX6O43752 255 aa17.4■□□□□ 0.38
C9orf47-201ENST00000334490 CCDC178Q5BJE1 867 aa17.4■□□□□ 0.38
C9orf47-201ENST00000334490 NECAB1Q8N987 351 aa17.4■□□□□ 0.38
C9orf47-201ENST00000334490 IL17REQ8NFR9 667 aa17.4■□□□□ 0.38
C9orf47-201ENST00000334490 LUC7LQ9NQ29 371 aaKnown RBP17.4■□□□□ 0.38
C9orf47-201ENST00000334490 A0A1B0GUL7 405 aa17.4■□□□□ 0.38
C9orf47-201ENST00000334490 KLHL10Q6JEL2 608 aa17.4■□□□□ 0.38
C9orf47-201ENST00000334490 PAF1Q8N7H5 531 aa17.4■□□□□ 0.38
C9orf47-201ENST00000334490 TBC1D32Q96NH3 1257 aa17.4■□□□□ 0.38
C9orf47-201ENST00000334490 BAG4O95429 457 aaKnown RBP17.4■□□□□ 0.38
C9orf47-201ENST00000334490 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.4■□□□□ 0.38
C9orf47-201ENST00000334490 KIAA0232Q92628 1395 aa17.4■□□□□ 0.38
C9orf47-201ENST00000334490 SMTNL1A8MU46 457 aa17.4■□□□□ 0.38
C9orf47-201ENST00000334490 BAG6P46379 1132 aa17.4■□□□□ 0.38
C9orf47-201ENST00000334490 UBA5Q9GZZ9 404 aa17.4■□□□□ 0.38
C9orf47-201ENST00000334490 GNAT2P19087 354 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms