RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 PNMA6EA0A0J9YXQ4 647 aa21.35■■□□□ 1.01
PKP3-201ENST00000331563 GOLGA6L19H0YKK7 550 aa21.35■■□□□ 1.01
PKP3-201ENST00000331563 PSEN1P49768 467 aa21.35■■□□□ 1.01
PKP3-201ENST00000331563 STK31Q9BXU1 1019 aa21.35■■□□□ 1.01
PKP3-201ENST00000331563 MST1RQ04912 1400 aa21.35■■□□□ 1.01
PKP3-201ENST00000331563 LARP1BQ659C4 914 aaKnown RBP21.34■■□□□ 1.01
PKP3-201ENST00000331563 DHX37Q8IY37 1157 aaKnown RBP21.34■■□□□ 1.01
PKP3-201ENST00000331563 PHAXQ9H814 394 aaKnown RBP21.34■■□□□ 1.01
PKP3-201ENST00000331563 SKILP12757 684 aa21.34■■□□□ 1.01
PKP3-201ENST00000331563 ARID5BQ14865 1188 aa21.34■■□□□ 1.01
PKP3-201ENST00000331563 RSPH14Q9UHP6 348 aa21.34■■□□□ 1.01
PKP3-201ENST00000331563 LRRC8AQ8IWT6 810 aa21.33■■□□□ 1.01
PKP3-201ENST00000331563 IL17RAQ96F46 866 aa21.33■■□□□ 1.01
PKP3-201ENST00000331563 SPG7Q9UQ90 795 aa21.33■■□□□ 1.01
PKP3-201ENST00000331563 HTATSF1O43719 755 aaKnown RBP21.33■■□□□ 1.01
PKP3-201ENST00000331563 SLU7O95391 586 aaKnown RBP21.33■■□□□ 1.01
PKP3-201ENST00000331563 CWC27Q6UX04 472 aaKnown RBP21.33■■□□□ 1.01
PKP3-201ENST00000331563 FILIP1Q7Z7B0 1213 aa21.33■■□□□ 1.01
PKP3-201ENST00000331563 NECAB1Q8N987 351 aa21.33■■□□□ 1.01
PKP3-201ENST00000331563 TFIP11Q9UBB9 837 aaKnown RBP21.33■■□□□ 1.01
PKP3-201ENST00000331563 BMS1Q14692 1282 aaKnown RBP21.33■■□□□ 1
PKP3-201ENST00000331563 DDX54Q8TDD1 881 aaKnown RBP21.33■■□□□ 1
PKP3-201ENST00000331563 PDRG1Q9NUG6 133 aa21.33■■□□□ 1
PKP3-201ENST00000331563 TEFQ10587 303 aa21.32■■□□□ 1
PKP3-201ENST00000331563 FLIIQ13045 1269 aa21.32■■□□□ 1
PKP3-201ENST00000331563 CLGNO14967 610 aa21.32■■□□□ 1
PKP3-201ENST00000331563 CADPS2Q86UW7 1296 aa21.32■■□□□ 1
PKP3-201ENST00000331563 TDRD7Q8NHU6 1098 aaKnown RBP21.32■■□□□ 1
PKP3-201ENST00000331563 BICD2Q8TD16 824 aa21.32■■□□□ 1
PKP3-201ENST00000331563 JAKMIP1Q96N16 626 aaKnown RBP21.32■■□□□ 1
PKP3-201ENST00000331563 STAP2Q9UGK3 403 aa21.32■■□□□ 1
PKP3-201ENST00000331563 PRAMEF22A3QJZ6 481 aa21.31■■□□□ 1
PKP3-201ENST00000331563 CSB-PGBD3P0DP91 1061 aa21.31■■□□□ 1
PKP3-201ENST00000331563 HDGFL1Q5TGJ6 251 aa21.31■■□□□ 1
PKP3-201ENST00000331563 SPATA32Q96LK8 384 aa21.31■■□□□ 1
PKP3-201ENST00000331563 HYPKQ9NX55 129 aa21.31■■□□□ 1
PKP3-201ENST00000331563 SGSM2O43147 1006 aa21.31■■□□□ 1
PKP3-201ENST00000331563 PLEKHO1Q53GL0 409 aaPredicted RBP21.31■■□□□ 1
PKP3-201ENST00000331563 PXDNQ92626 1479 aa21.31■■□□□ 1
PKP3-201ENST00000331563 RGPD5Q99666 1765 aa21.3■■□□□ 1
PKP3-201ENST00000331563 LMTK3Q96Q04 1460 aa21.3■■□□□ 1
PKP3-201ENST00000331563 BTBD11A6QL63 1104 aa21.3■■□□□ 1
PKP3-201ENST00000331563 NOP2P46087 812 aaKnown RBP21.3■■□□□ 1
PKP3-201ENST00000331563 C1orf141Q5JVX7 400 aa21.3■■□□□ 1
PKP3-201ENST00000331563 CCDC30Q5VVM6 783 aa21.3■■□□□ 1
PKP3-201ENST00000331563 RASSF4Q9H2L5 321 aa21.3■■□□□ 1
PKP3-201ENST00000331563 EPB41L2O43491 1005 aaKnown RBP21.29■■□□□ 1
PKP3-201ENST00000331563 DDX19AQ9NUU7 478 aaKnown RBP21.29■■□□□ 1
PKP3-201ENST00000331563 ZNF446Q9NWS9 450 aa21.29■■□□□ 1
PKP3-201ENST00000331563 ERBB3P21860 1342 aa21.29■■□□□ 1
PKP3-201ENST00000331563 USP54Q70EL1 1684 aa21.29■■□□□ 1
PKP3-201ENST00000331563 APPP05067 770 aa21.29■■□□□ 1
PKP3-201ENST00000331563 CDC37L1Q7L3B6 337 aa21.29■■□□□ 1
PKP3-201ENST00000331563 GNAI3P08754 354 aa21.28■■□□□ 1
PKP3-201ENST00000331563 ATP8B2P98198 1209 aa21.28■■□□□ 1
PKP3-201ENST00000331563 ERCC6LQ2NKX8 1250 aa21.28■■□□□ 1
PKP3-201ENST00000331563 KIF1BPQ96EK5 621 aa21.28■■□□□ 1
PKP3-201ENST00000331563 LSG1Q9H089 658 aaKnown RBP21.28■■□□□ 1
PKP3-201ENST00000331563 CYP46A1Q9Y6A2 500 aa21.28■■□□□ 1
PKP3-201ENST00000331563 LOC102724159A0A0B4J2E5 919 aa21.28■■□□□ 1
PKP3-201ENST00000331563 NEMFO60524 1076 aa21.28■■□□□ 1
PKP3-201ENST00000331563 PWP2Q15269 919 aaKnown RBP21.28■■□□□ 1
PKP3-201ENST00000331563 AKAP4Q5JQC9 854 aa21.28■■□□□ 1
PKP3-201ENST00000331563 ZSCAN31Q96LW9 406 aaPredicted RBP21.28■■□□□ 1
PKP3-201ENST00000331563 SH2B1Q9NRF2 756 aaPredicted RBP21.28■■□□□ 1
PKP3-201ENST00000331563 CCDC69A6NI79 296 aa21.27■■□□□ 1
PKP3-201ENST00000331563 POLR3GO15318 223 aaPredicted RBP21.27■■□□□ 1
PKP3-201ENST00000331563 EIF4A1P60842 406 aaKnown RBP21.27■■□□□ 1
PKP3-201ENST00000331563 SLFNL1Q499Z3 407 aa21.27■■□□□ 1
PKP3-201ENST00000331563 USP16Q9Y5T5 823 aa21.27■■□□□ 1
PKP3-201ENST00000331563 LRRFIP2Q9Y608 721 aaKnown RBP21.27■■□□□ 1
PKP3-201ENST00000331563 GTF2A1P52655 376 aaPredicted RBP21.27■□□□□ 0.99
PKP3-201ENST00000331563 RNF20Q5VTR2 975 aa21.27■□□□□ 0.99
PKP3-201ENST00000331563 NYAP1Q6ZVC0 841 aa21.27■□□□□ 0.99
PKP3-201ENST00000331563 BRINP3Q76B58 766 aa21.27■□□□□ 0.99
PKP3-201ENST00000331563 SCAND2PQ9GZW5 306 aaPredicted RBP21.27■□□□□ 0.99
PKP3-201ENST00000331563 CLSTN2Q9H4D0 955 aa21.27■□□□□ 0.99
PKP3-201ENST00000331563 TRPM3Q9HCF6 1732 aaPredicted RBP21.27■□□□□ 0.99
PKP3-201ENST00000331563 MED1Q15648 1581 aaPredicted RBP21.26■□□□□ 0.99
PKP3-201ENST00000331563 NPHP3Q7Z494 1330 aa21.26■□□□□ 0.99
PKP3-201ENST00000331563 BECN2A8MW95 431 aa21.26■□□□□ 0.99
PKP3-201ENST00000331563 RNMTO43148 476 aaKnown RBP21.26■□□□□ 0.99
PKP3-201ENST00000331563 DHX16O60231 1041 aaKnown RBP21.26■□□□□ 0.99
PKP3-201ENST00000331563 NR1I2O75469 434 aa21.26■□□□□ 0.99
PKP3-201ENST00000331563 SLC39A6Q13433 755 aa21.26■□□□□ 0.99
PKP3-201ENST00000331563 PRPF40BQ6NWY9 871 aaKnown RBP21.26■□□□□ 0.99
PKP3-201ENST00000331563 CNTROBQ8N137 903 aa21.26■□□□□ 0.99
PKP3-201ENST00000331563 CHPF2Q9P2E5 772 aa21.26■□□□□ 0.99
PKP3-201ENST00000331563 CEMIPQ8WUJ3 1361 aa21.26■□□□□ 0.99
PKP3-201ENST00000331563 TEX35Q5T0J7 233 aa21.26■□□□□ 0.99
PKP3-201ENST00000331563 STRCQ7RTU9 1775 aa21.26■□□□□ 0.99
PKP3-201ENST00000331563 ME3Q16798 604 aa21.25■□□□□ 0.99
PKP3-201ENST00000331563 ADCK5Q3MIX3 580 aa21.25■□□□□ 0.99
PKP3-201ENST00000331563 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.25■□□□□ 0.99
PKP3-201ENST00000331563 VPS53Q5VIR6 699 aa21.24■□□□□ 0.99
PKP3-201ENST00000331563 CTR9Q6PD62 1173 aa21.24■□□□□ 0.99
PKP3-201ENST00000331563 SYTL4Q96C24 671 aaPredicted RBP21.24■□□□□ 0.99
PKP3-201ENST00000331563 ELP1O95163 1332 aa21.24■□□□□ 0.99
PKP3-201ENST00000331563 SLIT3O75094 1523 aa21.24■□□□□ 0.99
PKP3-201ENST00000331563 SURF6O75683 361 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms