RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 NEUROD6Q96NK8 337 aa16.89■□□□□ 0.29
TRAIP-201ENST00000331456 CEP126Q9P2H0 1117 aa16.89■□□□□ 0.29
TRAIP-201ENST00000331456 TRMT112Q9UI30 125 aaKnown RBP16.89■□□□□ 0.29
TRAIP-201ENST00000331456 CICQ96RK0 1608 aaPredicted RBP16.89■□□□□ 0.29
TRAIP-201ENST00000331456 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
TRAIP-201ENST00000331456 LRRC24Q50LG9 513 aa16.87■□□□□ 0.29
TRAIP-201ENST00000331456 RFX7Q2KHR2 1363 aa16.87■□□□□ 0.29
TRAIP-201ENST00000331456 NUP98P52948 1817 aa16.87■□□□□ 0.29
TRAIP-201ENST00000331456 NMIQ13287 307 aaPredicted RBP16.87■□□□□ 0.29
TRAIP-201ENST00000331456 ZNF34Q8IZ26 560 aa16.87■□□□□ 0.29
TRAIP-201ENST00000331456 HAUS7Q99871 368 aa16.87■□□□□ 0.29
TRAIP-201ENST00000331456 CWC22Q9HCG8 908 aaKnown RBP16.87■□□□□ 0.29
TRAIP-201ENST00000331456 USP21Q9UK80 565 aa16.87■□□□□ 0.29
TRAIP-201ENST00000331456 AKAP2Q9Y2D5 859 aa16.87■□□□□ 0.29
TRAIP-201ENST00000331456 IRS4O14654 1257 aaPredicted RBP16.86■□□□□ 0.29
TRAIP-201ENST00000331456 ZNF609O15014 1411 aa16.86■□□□□ 0.29
TRAIP-201ENST00000331456 RREB1Q92766 1687 aa16.86■□□□□ 0.29
TRAIP-201ENST00000331456 PDE8AO60658 829 aa16.86■□□□□ 0.29
TRAIP-201ENST00000331456 CTSWP56202 376 aa16.86■□□□□ 0.29
TRAIP-201ENST00000331456 ITPK1Q13572 414 aa16.86■□□□□ 0.29
TRAIP-201ENST00000331456 SNRKQ9NRH2 765 aa16.86■□□□□ 0.29
TRAIP-201ENST00000331456 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
TRAIP-201ENST00000331456 KCNQ2O43526 872 aa16.85■□□□□ 0.29
TRAIP-201ENST00000331456 TICAM2Q86XR7 235 aa16.85■□□□□ 0.29
TRAIP-201ENST00000331456 AK7Q96M32 723 aa16.85■□□□□ 0.29
TRAIP-201ENST00000331456 DNAJC2Q99543 621 aaKnown RBP16.85■□□□□ 0.29
TRAIP-201ENST00000331456 PUS3Q9BZE2 481 aaKnown RBP16.85■□□□□ 0.29
TRAIP-201ENST00000331456 SNX14Q9Y5W7 946 aa16.85■□□□□ 0.29
TRAIP-201ENST00000331456 ANKRD18BA2A2Z9 1011 aa16.84■□□□□ 0.29
TRAIP-201ENST00000331456 MCM4P33991 863 aa16.84■□□□□ 0.29
TRAIP-201ENST00000331456 DEKP35659 375 aaKnown RBP16.84■□□□□ 0.29
TRAIP-201ENST00000331456 TIMM10P62072 90 aa16.84■□□□□ 0.29
TRAIP-201ENST00000331456 RAB3GAP1Q15042 981 aa16.84■□□□□ 0.29
TRAIP-201ENST00000331456 TTLL11Q8NHH1 800 aa16.84■□□□□ 0.29
TRAIP-201ENST00000331456 FAM227BQ96M60 508 aa16.84■□□□□ 0.29
TRAIP-201ENST00000331456 A0A1B0GUL7 405 aa16.84■□□□□ 0.29
TRAIP-201ENST00000331456 PTH1RQ03431 593 aa16.84■□□□□ 0.29
TRAIP-201ENST00000331456 PARP10Q53GL7 1025 aa16.84■□□□□ 0.29
TRAIP-201ENST00000331456 CCDC85AQ96PX6 553 aaPredicted RBP16.84■□□□□ 0.29
TRAIP-201ENST00000331456 HSP90B1P14625 803 aaKnown RBP16.83■□□□□ 0.28
TRAIP-201ENST00000331456 ITGA6P23229 1130 aa16.83■□□□□ 0.28
TRAIP-201ENST00000331456 KCNJ4P48050 445 aa16.83■□□□□ 0.28
TRAIP-201ENST00000331456 MEX3CQ5U5Q3 659 aaKnown RBP16.83■□□□□ 0.28
TRAIP-201ENST00000331456 SYNE4Q8N205 404 aa16.83■□□□□ 0.28
TRAIP-201ENST00000331456 GBP4Q96PP9 640 aa16.83■□□□□ 0.28
TRAIP-201ENST00000331456 ZNF831Q5JPB2 1677 aa16.83■□□□□ 0.28
TRAIP-201ENST00000331456 UBN2Q6ZU65 1347 aa16.83■□□□□ 0.28
TRAIP-201ENST00000331456 A0A0D9SFI3 127 aa16.82■□□□□ 0.28
TRAIP-201ENST00000331456 ZKSCAN1P17029 563 aaPredicted RBP16.82■□□□□ 0.28
TRAIP-201ENST00000331456 NUCB2P80303 420 aa16.82■□□□□ 0.28
TRAIP-201ENST00000331456 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.82■□□□□ 0.28
TRAIP-201ENST00000331456 CAMTA2O94983 1202 aa16.82■□□□□ 0.28
TRAIP-201ENST00000331456 CCDC158Q5M9N0 1113 aa16.82■□□□□ 0.28
TRAIP-201ENST00000331456 GORABQ5T7V8 394 aa16.82■□□□□ 0.28
TRAIP-201ENST00000331456 MAP4K1Q92918 833 aa16.82■□□□□ 0.28
TRAIP-201ENST00000331456 KCNB2Q92953 911 aa16.82■□□□□ 0.28
TRAIP-201ENST00000331456 TNPO1Q92973 898 aaKnown RBP16.82■□□□□ 0.28
TRAIP-201ENST00000331456 EDC3Q96F86 508 aaKnown RBP16.82■□□□□ 0.28
TRAIP-201ENST00000331456 TMX3Q96JJ7 454 aa16.82■□□□□ 0.28
TRAIP-201ENST00000331456 UTP14AQ9BVJ6 771 aaKnown RBP16.82■□□□□ 0.28
TRAIP-201ENST00000331456 UPF3BQ9BZI7 483 aaKnown RBP16.82■□□□□ 0.28
TRAIP-201ENST00000331456 GREM2Q9H772 168 aa16.82■□□□□ 0.28
TRAIP-201ENST00000331456 ZNF652Q9Y2D9 606 aa16.82■□□□□ 0.28
TRAIP-201ENST00000331456 MED23Q9ULK4 1368 aa16.81■□□□□ 0.28
TRAIP-201ENST00000331456 SH3TC1Q8TE82 1336 aa16.81■□□□□ 0.28
TRAIP-201ENST00000331456 DDX11L8A8MPP1 907 aa16.81■□□□□ 0.28
TRAIP-201ENST00000331456 IFIT1P09914 478 aaKnown RBP16.81■□□□□ 0.28
TRAIP-201ENST00000331456 RNF20Q5VTR2 975 aa16.81■□□□□ 0.28
TRAIP-201ENST00000331456 PRPF40BQ6NWY9 871 aaKnown RBP16.81■□□□□ 0.28
TRAIP-201ENST00000331456 LDHAL6AQ6ZMR3 332 aa16.81■□□□□ 0.28
TRAIP-201ENST00000331456 KBTBD3Q8NAB2 608 aa16.81■□□□□ 0.28
TRAIP-201ENST00000331456 PAG1Q9NWQ8 432 aa16.81■□□□□ 0.28
TRAIP-201ENST00000331456 MYH3P11055 1940 aa16.81■□□□□ 0.28
TRAIP-201ENST00000331456 METTL24Q5JXM2 366 aa16.8■□□□□ 0.28
TRAIP-201ENST00000331456 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
TRAIP-201ENST00000331456 CNNM1Q9NRU3 951 aa16.8■□□□□ 0.28
TRAIP-201ENST00000331456 RBM8AQ9Y5S9 174 aaKnown RBP16.8■□□□□ 0.28
TRAIP-201ENST00000331456 NECTIN1Q15223 517 aa16.8■□□□□ 0.28
TRAIP-201ENST00000331456 DDX46Q7L014 1031 aaKnown RBP16.8■□□□□ 0.28
TRAIP-201ENST00000331456 TM6SF1Q9BZW5 370 aa16.8■□□□□ 0.28
TRAIP-201ENST00000331456 GOLIM4O00461 696 aa16.79■□□□□ 0.28
TRAIP-201ENST00000331456 PTMSP20962 102 aa16.79■□□□□ 0.28
TRAIP-201ENST00000331456 CUL4AQ13619 759 aa16.79■□□□□ 0.28
TRAIP-201ENST00000331456 GSE1Q14687 1217 aa16.79■□□□□ 0.28
TRAIP-201ENST00000331456 TTC39AQ5SRH9 613 aa16.79■□□□□ 0.28
TRAIP-201ENST00000331456 SUSD4Q5VX71 490 aa16.79■□□□□ 0.28
TRAIP-201ENST00000331456 RIPOR2Q9Y4F9 1068 aa16.79■□□□□ 0.28
TRAIP-201ENST00000331456 COL5A3P25940 1745 aaPredicted RBP16.79■□□□□ 0.28
TRAIP-201ENST00000331456 THSD7AQ9UPZ6 1657 aa16.79■□□□□ 0.28
TRAIP-201ENST00000331456 LRRFIP1Q32MZ4 808 aaKnown RBP16.79■□□□□ 0.28
TRAIP-201ENST00000331456 CREB3L3Q68CJ9 461 aa16.79■□□□□ 0.28
TRAIP-201ENST00000331456 XAGE2Q96GT9 111 aa16.79■□□□□ 0.28
TRAIP-201ENST00000331456 INTS4Q96HW7 963 aaKnown RBP16.79■□□□□ 0.28
TRAIP-201ENST00000331456 NDUFB9Q9Y6M9 179 aa16.79■□□□□ 0.28
TRAIP-201ENST00000331456 SPEF2Q9C093 1822 aa16.78■□□□□ 0.28
TRAIP-201ENST00000331456 CASTP20810 708 aaKnown RBP16.78■□□□□ 0.28
TRAIP-201ENST00000331456 ATP2B3Q16720 1220 aa16.78■□□□□ 0.28
TRAIP-201ENST00000331456 MCMDC2Q4G0Z9 681 aa16.78■□□□□ 0.28
TRAIP-201ENST00000331456 CLEC4GQ6UXB4 293 aa16.78■□□□□ 0.28
TRAIP-201ENST00000331456 NIP7Q9Y221 180 aaKnown RBP eCLIP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms