RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PAPPA2Q9BXP8 1791 aa20■□□□□ 0.79
CTHRC1-201ENST00000330295 PRAMEF22A3QJZ6 481 aa20■□□□□ 0.79
CTHRC1-201ENST00000330295 TBC1D10BQ4KMP7 808 aaPredicted RBP20■□□□□ 0.79
CTHRC1-201ENST00000330295 INTS3Q68E01 1043 aaKnown RBP20■□□□□ 0.79
CTHRC1-201ENST00000330295 PCGF6Q9BYE7 350 aa20■□□□□ 0.79
CTHRC1-201ENST00000330295 CEP290O15078 2479 aa19.99■□□□□ 0.79
CTHRC1-201ENST00000330295 NBPF26B4DH59 902 aa19.99■□□□□ 0.79
CTHRC1-201ENST00000330295 EGFRP00533 1210 aa19.99■□□□□ 0.79
CTHRC1-201ENST00000330295 NBPF10Q6P3W6 841 aaKnown RBP19.99■□□□□ 0.79
CTHRC1-201ENST00000330295 DPF2Q92785 391 aa19.99■□□□□ 0.79
CTHRC1-201ENST00000330295 YDJCA8MPS7 323 aa19.98■□□□□ 0.79
CTHRC1-201ENST00000330295 GNAT3A8MTJ3 354 aa19.98■□□□□ 0.79
CTHRC1-201ENST00000330295 POLR3GLQ9BT43 218 aa19.98■□□□□ 0.79
CTHRC1-201ENST00000330295 ZBTB12Q9Y330 459 aaPredicted RBP19.98■□□□□ 0.79
CTHRC1-201ENST00000330295 BTBD11A6QL63 1104 aa19.97■□□□□ 0.79
CTHRC1-201ENST00000330295 FKTNO75072 461 aa19.97■□□□□ 0.79
CTHRC1-201ENST00000330295 DPP8Q6V1X1 898 aaPredicted RBP19.97■□□□□ 0.79
CTHRC1-201ENST00000330295 IBTKQ9P2D0 1353 aaPredicted RBP19.96■□□□□ 0.79
CTHRC1-201ENST00000330295 SNRPA1P09661 255 aaKnown RBP19.96■□□□□ 0.79
CTHRC1-201ENST00000330295 SULF1Q8IWU6 871 aa19.96■□□□□ 0.79
CTHRC1-201ENST00000330295 CDCA5Q96FF9 252 aa19.96■□□□□ 0.79
CTHRC1-201ENST00000330295 HTTP42858 3142 aa19.96■□□□□ 0.79
CTHRC1-201ENST00000330295 C3orf67Q6ZVT6 689 aa19.95■□□□□ 0.78
CTHRC1-201ENST00000330295 NUP98P52948 1817 aa19.95■□□□□ 0.78
CTHRC1-201ENST00000330295 FKBP1BP68106 108 aa19.94■□□□□ 0.78
CTHRC1-201ENST00000330295 RBM26Q5T8P6 1007 aaKnown RBP19.94■□□□□ 0.78
CTHRC1-201ENST00000330295 MPNDQ8N594 471 aa19.94■□□□□ 0.78
CTHRC1-201ENST00000330295 CEMIPQ8WUJ3 1361 aa19.94■□□□□ 0.78
CTHRC1-201ENST00000330295 A0A0C4DFX4 3053 aa19.93■□□□□ 0.78
CTHRC1-201ENST00000330295 BRCA2P51587 3418 aa19.93■□□□□ 0.78
CTHRC1-201ENST00000330295 PSMD14O00487 310 aa19.93■□□□□ 0.78
CTHRC1-201ENST00000330295 EN2P19622 333 aaPredicted RBP19.93■□□□□ 0.78
CTHRC1-201ENST00000330295 TM4SF4P48230 202 aa19.93■□□□□ 0.78
CTHRC1-201ENST00000330295 PANK3Q9H999 370 aa19.93■□□□□ 0.78
CTHRC1-201ENST00000330295 GGA3Q9NZ52 723 aa19.93■□□□□ 0.78
CTHRC1-201ENST00000330295 GAS2L2Q8NHY3 880 aa19.92■□□□□ 0.78
CTHRC1-201ENST00000330295 OTUD5Q96G74 571 aa19.92■□□□□ 0.78
CTHRC1-201ENST00000330295 CFHR5Q9BXR6 569 aa19.92■□□□□ 0.78
CTHRC1-201ENST00000330295 UBN2Q6ZU65 1347 aa19.92■□□□□ 0.78
CTHRC1-201ENST00000330295 ERVV-1B6SEH8 477 aa19.91■□□□□ 0.78
CTHRC1-201ENST00000330295 GPTP24298 496 aa19.91■□□□□ 0.78
CTHRC1-201ENST00000330295 SP8Q8IXZ3 490 aa19.91■□□□□ 0.78
CTHRC1-201ENST00000330295 R3HDMLQ9H3Y0 253 aa19.91■□□□□ 0.78
CTHRC1-201ENST00000330295 TRIM17Q9Y577 477 aa19.91■□□□□ 0.78
CTHRC1-201ENST00000330295 CENPFP49454 3210 aa19.91■□□□□ 0.78
CTHRC1-201ENST00000330295 ABCC4O15439 1325 aa19.91■□□□□ 0.78
CTHRC1-201ENST00000330295 RPS12P25398 132 aaKnown RBP19.9■□□□□ 0.78
CTHRC1-201ENST00000330295 KIF4BQ2VIQ3 1234 aa19.9■□□□□ 0.78
CTHRC1-201ENST00000330295 SUSD4Q5VX71 490 aa19.9■□□□□ 0.78
CTHRC1-201ENST00000330295 NLRP3Q96P20 1036 aa19.9■□□□□ 0.78
CTHRC1-201ENST00000330295 H0YGN5 161 aa19.89■□□□□ 0.77
CTHRC1-201ENST00000330295 ASTN2O75129 1339 aaPredicted RBP19.89■□□□□ 0.77
CTHRC1-201ENST00000330295 OTOP1Q7RTM1 612 aa19.89■□□□□ 0.77
CTHRC1-201ENST00000330295 DUOX1Q9NRD9 1551 aa19.88■□□□□ 0.77
CTHRC1-201ENST00000330295 MAP3K15Q6ZN16 1313 aa19.88■□□□□ 0.77
CTHRC1-201ENST00000330295 BBOX1O75936 387 aa19.88■□□□□ 0.77
CTHRC1-201ENST00000330295 NTSR2O95665 410 aa19.88■□□□□ 0.77
CTHRC1-201ENST00000330295 DIAPH1O60610 1272 aaKnown RBP19.87■□□□□ 0.77
CTHRC1-201ENST00000330295 SREBF2Q12772 1141 aa19.87■□□□□ 0.77
CTHRC1-201ENST00000330295 CLSPNQ9HAW4 1339 aa19.86■□□□□ 0.77
CTHRC1-201ENST00000330295 MNX1P50219 401 aaPredicted RBP19.86■□□□□ 0.77
CTHRC1-201ENST00000330295 CHRDL2Q6WN34 429 aa19.86■□□□□ 0.77
CTHRC1-201ENST00000330295 MOB2Q70IA6 237 aa19.86■□□□□ 0.77
CTHRC1-201ENST00000330295 NGEFQ8N5V2 710 aa19.86■□□□□ 0.77
CTHRC1-201ENST00000330295 ARMC5Q96C12 935 aa19.86■□□□□ 0.77
CTHRC1-201ENST00000330295 COL6A3P12111 3177 aa19.86■□□□□ 0.77
CTHRC1-201ENST00000330295 UBE2Q2LH0YL09 131 aa19.85■□□□□ 0.77
CTHRC1-201ENST00000330295 DBNDD1Q9H9R9 158 aa19.85■□□□□ 0.77
CTHRC1-201ENST00000330295 ANGEL2Q5VTE6 544 aaKnown RBP19.84■□□□□ 0.77
CTHRC1-201ENST00000330295 ZNF34Q8IZ26 560 aa19.84■□□□□ 0.77
CTHRC1-201ENST00000330295 RTL9Q8NET4 1388 aa19.83■□□□□ 0.77
CTHRC1-201ENST00000330295 LAMB4A4D0S4 1761 aa19.83■□□□□ 0.77
CTHRC1-201ENST00000330295 RANBP2P49792 3224 aaKnown RBP19.83■□□□□ 0.77
CTHRC1-201ENST00000330295 MKRN3Q13064 507 aaKnown RBP19.83■□□□□ 0.77
CTHRC1-201ENST00000330295 KIF6Q6ZMV9 814 aa19.83■□□□□ 0.77
CTHRC1-201ENST00000330295 PPP1R42Q7Z4L9 355 aa19.83■□□□□ 0.77
CTHRC1-201ENST00000330295 RBM27Q9P2N5 1060 aaKnown RBP19.83■□□□□ 0.77
CTHRC1-201ENST00000330295 PTPN22Q9Y2R2 807 aa19.83■□□□□ 0.77
CTHRC1-201ENST00000330295 WASHC4Q2M389 1173 aa19.82■□□□□ 0.76
CTHRC1-201ENST00000330295 SLC10A5Q5PT55 438 aa19.82■□□□□ 0.76
CTHRC1-201ENST00000330295 TTLL7Q6ZT98 887 aa19.82■□□□□ 0.76
CTHRC1-201ENST00000330295 TMEM106CQ9BVX2 250 aa19.82■□□□□ 0.76
CTHRC1-201ENST00000330295 KCNQ5Q9NR82 932 aa19.82■□□□□ 0.76
CTHRC1-201ENST00000330295 LAMB2P55268 1798 aa19.81■□□□□ 0.76
CTHRC1-201ENST00000330295 SCARF1Q14162 830 aa19.81■□□□□ 0.76
CTHRC1-201ENST00000330295 CCER1Q8TC90 406 aaPredicted RBP19.81■□□□□ 0.76
CTHRC1-201ENST00000330295 ZBTB3Q9H5J0 574 aa19.81■□□□□ 0.76
CTHRC1-201ENST00000330295 TIMELESSQ9UNS1 1208 aa19.81■□□□□ 0.76
CTHRC1-201ENST00000330295 DDX60Q8IY21 1712 aaKnown RBP19.81■□□□□ 0.76
CTHRC1-201ENST00000330295 ANKRD36CQ5JPF3 1778 aa19.8■□□□□ 0.76
CTHRC1-201ENST00000330295 LRRC37AA6NMS7 1700 aa19.8■□□□□ 0.76
CTHRC1-201ENST00000330295 ALDH1A1P00352 501 aa19.8■□□□□ 0.76
CTHRC1-201ENST00000330295 KNSTRNQ9Y448 316 aa19.8■□□□□ 0.76
CTHRC1-201ENST00000330295 ECE2O60344 883 aa19.79■□□□□ 0.76
CTHRC1-201ENST00000330295 GRAPQ13588 217 aa19.79■□□□□ 0.76
CTHRC1-201ENST00000330295 PARP10Q53GL7 1025 aa19.79■□□□□ 0.76
CTHRC1-201ENST00000330295 GRAPLQ8TC17 118 aaPredicted RBP19.79■□□□□ 0.76
CTHRC1-201ENST00000330295 RIMBP2O15034 1052 aa19.78■□□□□ 0.76
CTHRC1-201ENST00000330295 TTLL12Q14166 644 aaPredicted RBP19.78■□□□□ 0.76
CTHRC1-201ENST00000330295 DDX46Q7L014 1031 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms