RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 SLFNL1Q499Z3 407 aa16.79■□□□□ 0.28
CHRNA3-201ENST00000326828 TMX1Q9H3N1 280 aa16.79■□□□□ 0.28
CHRNA3-201ENST00000326828 FLT4P35916 1363 aa16.79■□□□□ 0.28
CHRNA3-201ENST00000326828 SDF4Q9BRK5 362 aa16.79■□□□□ 0.28
CHRNA3-201ENST00000326828 NCOA5Q9HCD5 579 aaKnown RBP16.79■□□□□ 0.28
CHRNA3-201ENST00000326828 PREX1Q8TCU6 1659 aa16.79■□□□□ 0.28
CHRNA3-201ENST00000326828 EPB41L2O43491 1005 aaKnown RBP16.78■□□□□ 0.28
CHRNA3-201ENST00000326828 TERF2Q15554 542 aa16.78■□□□□ 0.28
CHRNA3-201ENST00000326828 SYT10Q6XYQ8 523 aa16.78■□□□□ 0.28
CHRNA3-201ENST00000326828 CCDC73Q6ZRK6 1079 aa16.78■□□□□ 0.28
CHRNA3-201ENST00000326828 HOMER1Q86YM7 354 aa16.78■□□□□ 0.28
CHRNA3-201ENST00000326828 ZNF397Q8NF99 534 aaPredicted RBP16.78■□□□□ 0.28
CHRNA3-201ENST00000326828 ELP1O95163 1332 aa16.78■□□□□ 0.28
CHRNA3-201ENST00000326828 A2ML1A8K2U0 1454 aa16.78■□□□□ 0.28
CHRNA3-201ENST00000326828 KINO60870 393 aaKnown RBP16.78■□□□□ 0.28
CHRNA3-201ENST00000326828 ZRSR1Q15695 479 aaKnown RBP16.78■□□□□ 0.28
CHRNA3-201ENST00000326828 GOLPH3LQ9H4A5 285 aa16.78■□□□□ 0.28
CHRNA3-201ENST00000326828 ARHGEF10O15013 1369 aa16.78■□□□□ 0.28
CHRNA3-201ENST00000326828 MAP3K5Q99683 1374 aa16.78■□□□□ 0.28
CHRNA3-201ENST00000326828 DLC1Q96QB1 1528 aa16.77■□□□□ 0.28
CHRNA3-201ENST00000326828 POLR3GO15318 223 aaPredicted RBP16.77■□□□□ 0.28
CHRNA3-201ENST00000326828 IGSF1Q8N6C5 1336 aa16.77■□□□□ 0.28
CHRNA3-201ENST00000326828 SASH1O94885 1247 aa16.77■□□□□ 0.27
CHRNA3-201ENST00000326828 RAB11FIP4Q86YS3 637 aa16.77■□□□□ 0.27
CHRNA3-201ENST00000326828 ABTB2Q8N961 1025 aa16.77■□□□□ 0.27
CHRNA3-201ENST00000326828 BICC1Q9H694 974 aaKnown RBP16.77■□□□□ 0.27
CHRNA3-201ENST00000326828 BTBD11A6QL63 1104 aa16.76■□□□□ 0.27
CHRNA3-201ENST00000326828 IQCB1Q15051 598 aa16.76■□□□□ 0.27
CHRNA3-201ENST00000326828 ANKRD1Q15327 319 aa16.76■□□□□ 0.27
CHRNA3-201ENST00000326828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.76■□□□□ 0.27
CHRNA3-201ENST00000326828 FSIP1Q8NA03 581 aa16.76■□□□□ 0.27
CHRNA3-201ENST00000326828 GTF2E1P29083 439 aaPredicted RBP16.76■□□□□ 0.27
CHRNA3-201ENST00000326828 RBM6P78332 1123 aaKnown RBP16.76■□□□□ 0.27
CHRNA3-201ENST00000326828 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
CHRNA3-201ENST00000326828 TMC6Q7Z403 805 aa16.76■□□□□ 0.27
CHRNA3-201ENST00000326828 SUCLG2Q96I99 432 aa16.76■□□□□ 0.27
CHRNA3-201ENST00000326828 MORC2Q9Y6X9 1032 aaPredicted RBP16.76■□□□□ 0.27
CHRNA3-201ENST00000326828 PIP4K2AP48426 406 aaPredicted RBP16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 GABPB1Q06547 395 aaPredicted RBP16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 STX1AQ16623 288 aa16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 A0A1B0GVL5 298 aa16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 HOXC9P31274 260 aa16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 SNW1Q13573 536 aaKnown RBP16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 CCAR2Q8N163 923 aaKnown RBP16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 RBM33Q96EV2 1170 aaKnown RBP16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 USP28Q96RU2 1077 aa16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 USP6P35125 1406 aa16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 SLU7O95391 586 aaKnown RBP16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 RESTQ13127 1097 aa16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 NEK1Q96PY6 1258 aa16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 OVOS2A0A0J9YW53 1432 aa16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 OVOS2Q6IE36 1432 aa16.75■□□□□ 0.27
CHRNA3-201ENST00000326828 APOBRQ0VD83 1088 aa16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 CFAP45Q9UL16 551 aa16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 CCZ1BP86790 482 aa16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 CCZ1P86791 482 aaPredicted RBP16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 DDX46Q7L014 1031 aaKnown RBP16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 SBNO1A3KN83 1393 aa16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 HTATSF1O43719 755 aaKnown RBP16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 MYL6BP14649 208 aa16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 GOLGA8FQ08AF8 430 aa16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 GOLGA8DPQ0D2H9 430 aa16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 SCRN1Q12765 414 aa16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 HSP90AA4PQ58FG1 418 aa16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 EPC1Q9H2F5 836 aa16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 PEAK1Q9H792 1746 aa16.74■□□□□ 0.27
CHRNA3-201ENST00000326828 SETD1BQ9UPS6 1966 aaKnown RBP16.73■□□□□ 0.27
CHRNA3-201ENST00000326828 ZNF446Q9NWS9 450 aa16.73■□□□□ 0.27
CHRNA3-201ENST00000326828 IFNKQ9P0W0 207 aa16.73■□□□□ 0.27
CHRNA3-201ENST00000326828 POLR3DP05423 398 aaPredicted RBP16.73■□□□□ 0.27
CHRNA3-201ENST00000326828 SF3A1Q15459 793 aaKnown RBP16.73■□□□□ 0.27
CHRNA3-201ENST00000326828 LRRC59Q96AG4 307 aaKnown RBP16.73■□□□□ 0.27
CHRNA3-201ENST00000326828 TMEM51Q9NW97 253 aa16.73■□□□□ 0.27
CHRNA3-201ENST00000326828 CEP57L1Q8IYX8 460 aa16.72■□□□□ 0.27
CHRNA3-201ENST00000326828 ERO1AQ96HE7 468 aa16.72■□□□□ 0.27
CHRNA3-201ENST00000326828 ZFP91Q96JP5 570 aaPredicted RBP16.72■□□□□ 0.27
CHRNA3-201ENST00000326828 ARHGAP29Q52LW3 1261 aa16.72■□□□□ 0.27
CHRNA3-201ENST00000326828 DHX40Q8IX18 779 aaKnown RBP16.72■□□□□ 0.27
CHRNA3-201ENST00000326828 PLCD3Q8N3E9 789 aa16.72■□□□□ 0.27
CHRNA3-201ENST00000326828 ADCY9O60503 1353 aa16.72■□□□□ 0.27
CHRNA3-201ENST00000326828 PLEKHG3A1L390 1219 aa16.72■□□□□ 0.27
CHRNA3-201ENST00000326828 ZNF530Q6P9A1 599 aaPredicted RBP16.72■□□□□ 0.27
CHRNA3-201ENST00000326828 NYAP1Q6ZVC0 841 aa16.72■□□□□ 0.27
CHRNA3-201ENST00000326828 ERC1Q8IUD2 1116 aa16.72■□□□□ 0.27
CHRNA3-201ENST00000326828 DNAI1Q9UI46 699 aa16.72■□□□□ 0.27
CHRNA3-201ENST00000326828 A0A0G2JLW4 131 aa16.71■□□□□ 0.27
CHRNA3-201ENST00000326828 LMOD1P29536 600 aaPredicted RBP16.71■□□□□ 0.27
CHRNA3-201ENST00000326828 NOL10Q9BSC4 688 aaKnown RBP16.71■□□□□ 0.27
CHRNA3-201ENST00000326828 XPO4Q9C0E2 1151 aaKnown RBP16.71■□□□□ 0.27
CHRNA3-201ENST00000326828 TAF5LO75529 589 aa16.71■□□□□ 0.27
CHRNA3-201ENST00000326828 DPCR1Q3MIW9 517 aa16.71■□□□□ 0.27
CHRNA3-201ENST00000326828 LMOD2Q6P5Q4 547 aa16.71■□□□□ 0.27
CHRNA3-201ENST00000326828 ANO10Q9NW15 660 aa16.71■□□□□ 0.27
CHRNA3-201ENST00000326828 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
CHRNA3-201ENST00000326828 CCDC66A2RUB6 948 aa16.7■□□□□ 0.26
CHRNA3-201ENST00000326828 SYCP1Q15431 976 aa16.7■□□□□ 0.26
CHRNA3-201ENST00000326828 RBM43Q6ZSC3 357 aaKnown RBP16.7■□□□□ 0.26
CHRNA3-201ENST00000326828 MRFAP1L1Q96HT8 127 aa16.7■□□□□ 0.26
CHRNA3-201ENST00000326828 PTPDC1A2A3K4 754 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms