RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 ANKLE2Q86XL3 938 aa19.76■□□□□ 0.75
SSH1-201ENST00000326470 BICD2Q8TD16 824 aa19.76■□□□□ 0.75
SSH1-201ENST00000326470 CACTINQ8WUQ7 758 aaKnown RBP19.76■□□□□ 0.75
SSH1-201ENST00000326470 KSR2Q6VAB6 950 aa19.76■□□□□ 0.75
SSH1-201ENST00000326470 TAF6LQ9Y6J9 622 aa19.76■□□□□ 0.75
SSH1-201ENST00000326470 JCADQ9P266 1359 aa19.75■□□□□ 0.75
SSH1-201ENST00000326470 BTBD11A6QL63 1104 aa19.75■□□□□ 0.75
SSH1-201ENST00000326470 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.75■□□□□ 0.75
SSH1-201ENST00000326470 G3BP1Q13283 466 aaKnown RBP eCLIP19.75■□□□□ 0.75
SSH1-201ENST00000326470 ABTB2Q8N961 1025 aa19.75■□□□□ 0.75
SSH1-201ENST00000326470 FSD1Q9BTV5 496 aa19.75■□□□□ 0.75
SSH1-201ENST00000326470 CCDC8Q9H0W5 538 aaPredicted RBP19.75■□□□□ 0.75
SSH1-201ENST00000326470 TEFQ10587 303 aa19.74■□□□□ 0.75
SSH1-201ENST00000326470 STK3Q13188 491 aa19.74■□□□□ 0.75
SSH1-201ENST00000326470 CCDC112Q8NEF3 446 aa19.74■□□□□ 0.75
SSH1-201ENST00000326470 CTNNA3Q9UI47 895 aa19.74■□□□□ 0.75
SSH1-201ENST00000326470 USP54Q70EL1 1684 aa19.74■□□□□ 0.75
SSH1-201ENST00000326470 ZNF142P52746 1687 aaPredicted RBP19.74■□□□□ 0.75
SSH1-201ENST00000326470 RESTQ13127 1097 aa19.74■□□□□ 0.75
SSH1-201ENST00000326470 TPD52L1Q16890 204 aaPredicted RBP19.74■□□□□ 0.75
SSH1-201ENST00000326470 CWF19L2Q2TBE0 894 aaKnown RBP19.74■□□□□ 0.75
SSH1-201ENST00000326470 CCDC144BQ3MJ40 725 aa19.74■□□□□ 0.75
SSH1-201ENST00000326470 SARM1Q6SZW1 724 aa19.74■□□□□ 0.75
SSH1-201ENST00000326470 CCDC144CPQ8IYA2 1237 aa19.74■□□□□ 0.75
SSH1-201ENST00000326470 BOLA2Q9H3K6 86 aa19.74■□□□□ 0.75
SSH1-201ENST00000326470 CGNQ9P2M7 1197 aaKnown RBP19.73■□□□□ 0.75
SSH1-201ENST00000326470 ANKARQ7Z5J8 1434 aa19.73■□□□□ 0.75
SSH1-201ENST00000326470 GTF3C6Q969F1 213 aa19.73■□□□□ 0.75
SSH1-201ENST00000326470 KAZALD1Q96I82 304 aa19.73■□□□□ 0.75
SSH1-201ENST00000326470 IQCB1Q15051 598 aa19.72■□□□□ 0.75
SSH1-201ENST00000326470 ZNF589Q86UQ0 364 aaPredicted RBP19.72■□□□□ 0.75
SSH1-201ENST00000326470 SUCLG2Q96I99 432 aa19.72■□□□□ 0.75
SSH1-201ENST00000326470 TLR7Q9NYK1 1049 aaKnown RBP19.72■□□□□ 0.75
SSH1-201ENST00000326470 UTYO14607 1347 aa19.72■□□□□ 0.75
SSH1-201ENST00000326470 GRM8O00222 908 aa19.72■□□□□ 0.75
SSH1-201ENST00000326470 JAK2O60674 1132 aa19.72■□□□□ 0.75
SSH1-201ENST00000326470 KRT32Q14532 448 aa19.72■□□□□ 0.75
SSH1-201ENST00000326470 USPL1Q5W0Q7 1092 aa19.72■□□□□ 0.75
SSH1-201ENST00000326470 LRRC8AQ8IWT6 810 aa19.72■□□□□ 0.75
SSH1-201ENST00000326470 ZSCAN16Q9H4T2 348 aaPredicted RBP19.72■□□□□ 0.75
SSH1-201ENST00000326470 CFAP45Q9UL16 551 aa19.72■□□□□ 0.75
SSH1-201ENST00000326470 NEMFO60524 1076 aa19.71■□□□□ 0.75
SSH1-201ENST00000326470 TAF5LO75529 589 aa19.71■□□□□ 0.75
SSH1-201ENST00000326470 PROSER3Q2NL68 480 aa19.71■□□□□ 0.75
SSH1-201ENST00000326470 AKAP4Q5JQC9 854 aa19.71■□□□□ 0.75
SSH1-201ENST00000326470 NBPF6Q5VWK0 638 aa19.71■□□□□ 0.75
SSH1-201ENST00000326470 LINS1Q8NG48 757 aa19.71■□□□□ 0.75
SSH1-201ENST00000326470 IP6K1Q92551 441 aa19.71■□□□□ 0.75
SSH1-201ENST00000326470 BRF1Q92994 677 aa19.71■□□□□ 0.75
SSH1-201ENST00000326470 MRFAP1L1Q96HT8 127 aa19.71■□□□□ 0.75
SSH1-201ENST00000326470 NBPF4Q96M43 638 aa19.71■□□□□ 0.75
SSH1-201ENST00000326470 BICC1Q9H694 974 aaKnown RBP19.71■□□□□ 0.75
SSH1-201ENST00000326470 GOLGA6L19H0YKK7 550 aa19.71■□□□□ 0.75
SSH1-201ENST00000326470 RBM6P78332 1123 aaKnown RBP19.71■□□□□ 0.75
SSH1-201ENST00000326470 CEP135Q66GS9 1140 aa19.7■□□□□ 0.74
SSH1-201ENST00000326470 SETD1BQ9UPS6 1966 aaKnown RBP19.7■□□□□ 0.74
SSH1-201ENST00000326470 DDX41Q9UJV9 622 aaKnown RBP19.7■□□□□ 0.74
SSH1-201ENST00000326470 H3BQV1 296 aa19.69■□□□□ 0.74
SSH1-201ENST00000326470 IFFO2Q5TF58 517 aa19.69■□□□□ 0.74
SSH1-201ENST00000326470 CTAGE5O15320 804 aa19.68■□□□□ 0.74
SSH1-201ENST00000326470 NAA30Q147X3 362 aaPredicted RBP19.68■□□□□ 0.74
SSH1-201ENST00000326470 NEK1Q96PY6 1258 aa19.68■□□□□ 0.74
SSH1-201ENST00000326470 ZNF530Q6P9A1 599 aaPredicted RBP19.68■□□□□ 0.74
SSH1-201ENST00000326470 MPRIPQ6WCQ1 1025 aa19.68■□□□□ 0.74
SSH1-201ENST00000326470 HEG1Q9ULI3 1381 aa19.68■□□□□ 0.74
SSH1-201ENST00000326470 KCNA6P17658 529 aa19.67■□□□□ 0.74
SSH1-201ENST00000326470 STX1AQ16623 288 aa19.67■□□□□ 0.74
SSH1-201ENST00000326470 C11orf57Q6ZUT1 292 aaPredicted RBP19.67■□□□□ 0.74
SSH1-201ENST00000326470 DDX11Q96FC9 970 aa19.67■□□□□ 0.74
SSH1-201ENST00000326470 LMO7Q8WWI1 1683 aa19.67■□□□□ 0.74
SSH1-201ENST00000326470 GABPB1Q06547 395 aaPredicted RBP19.66■□□□□ 0.74
SSH1-201ENST00000326470 NYAP1Q6ZVC0 841 aa19.66■□□□□ 0.74
SSH1-201ENST00000326470 SIL1Q9H173 461 aa19.66■□□□□ 0.74
SSH1-201ENST00000326470 MORC2Q9Y6X9 1032 aaPredicted RBP19.66■□□□□ 0.74
SSH1-201ENST00000326470 ADD1P35611 737 aaKnown RBP19.66■□□□□ 0.74
SSH1-201ENST00000326470 PLEKHO1Q53GL0 409 aaPredicted RBP19.66■□□□□ 0.74
SSH1-201ENST00000326470 Q6ZUG5 572 aa19.66■□□□□ 0.74
SSH1-201ENST00000326470 ZNF592Q92610 1267 aa19.66■□□□□ 0.74
SSH1-201ENST00000326470 RCOR1Q9UKL0 485 aa19.66■□□□□ 0.74
SSH1-201ENST00000326470 RNMTO43148 476 aaKnown RBP19.65■□□□□ 0.74
SSH1-201ENST00000326470 ARID5BQ14865 1188 aa19.65■□□□□ 0.74
SSH1-201ENST00000326470 SMARCC2Q8TAQ2 1214 aa19.65■□□□□ 0.74
SSH1-201ENST00000326470 COL15A1P39059 1388 aa19.65■□□□□ 0.74
SSH1-201ENST00000326470 USP27XA6NNY8 438 aa19.65■□□□□ 0.74
SSH1-201ENST00000326470 DDX58O95786 925 aaKnown RBP19.65■□□□□ 0.74
SSH1-201ENST00000326470 SKILP12757 684 aa19.65■□□□□ 0.74
SSH1-201ENST00000326470 PTPN14Q15678 1187 aa19.65■□□□□ 0.74
SSH1-201ENST00000326470 KIF18AQ8NI77 898 aa19.65■□□□□ 0.74
SSH1-201ENST00000326470 MRC1P22897 1456 aa19.65■□□□□ 0.74
SSH1-201ENST00000326470 HSP90B1P14625 803 aaKnown RBP19.64■□□□□ 0.74
SSH1-201ENST00000326470 C14orf37Q86TY3 774 aa19.64■□□□□ 0.74
SSH1-201ENST00000326470 CCAR1Q8IX12 1150 aaKnown RBP19.64■□□□□ 0.74
SSH1-201ENST00000326470 LLPHQ9BRT6 129 aaKnown RBP19.64■□□□□ 0.74
SSH1-201ENST00000326470 LTN1O94822 1766 aa19.64■□□□□ 0.73
SSH1-201ENST00000326470 NAA16Q6N069 864 aaPredicted RBP19.64■□□□□ 0.73
SSH1-201ENST00000326470 EDC3Q96F86 508 aaKnown RBP19.64■□□□□ 0.73
SSH1-201ENST00000326470 U3KPZ7 1027 aaPredicted RBP19.64■□□□□ 0.73
SSH1-201ENST00000326470 BECN2A8MW95 431 aa19.63■□□□□ 0.73
SSH1-201ENST00000326470 IGSF3O75054 1194 aa19.63■□□□□ 0.73
SSH1-201ENST00000326470 SCRN1Q12765 414 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms