RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 HMG20BQ9P0W2 317 aa25.66■■□□□ 1.7
LIMS2-201ENST00000324938 RBM27Q9P2N5 1060 aaKnown RBP25.66■■□□□ 1.7
LIMS2-201ENST00000324938 TMEM63CQ9P1W3 806 aa25.65■■□□□ 1.7
LIMS2-201ENST00000324938 NSFL1CQ9UNZ2 370 aaKnown RBP25.65■■□□□ 1.7
LIMS2-201ENST00000324938 COL14A1Q05707 1796 aaKnown RBP25.65■■□□□ 1.7
LIMS2-201ENST00000324938 SPEF2Q9C093 1822 aa25.65■■□□□ 1.7
LIMS2-201ENST00000324938 TAF5LO75529 589 aa25.64■■□□□ 1.7
LIMS2-201ENST00000324938 ZSCAN22P10073 491 aaPredicted RBP25.64■■□□□ 1.7
LIMS2-201ENST00000324938 NASPP49321 788 aaPredicted RBP25.64■■□□□ 1.7
LIMS2-201ENST00000324938 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.64■■□□□ 1.7
LIMS2-201ENST00000324938 PLCH1Q4KWH8 1693 aa25.64■■□□□ 1.7
LIMS2-201ENST00000324938 ZNF609O15014 1411 aa25.64■■□□□ 1.7
LIMS2-201ENST00000324938 STX6O43752 255 aa25.64■■□□□ 1.69
LIMS2-201ENST00000324938 SYT1P21579 422 aa25.64■■□□□ 1.69
LIMS2-201ENST00000324938 TSGA10IPQ3SY00 556 aa25.64■■□□□ 1.69
LIMS2-201ENST00000324938 USPL1Q5W0Q7 1092 aa25.64■■□□□ 1.69
LIMS2-201ENST00000324938 CCDC83Q8IWF9 413 aa25.64■■□□□ 1.69
LIMS2-201ENST00000324938 IL15P40933 162 aaPredicted RBP25.63■■□□□ 1.69
LIMS2-201ENST00000324938 ISCA1Q9BUE6 129 aa25.63■■□□□ 1.69
LIMS2-201ENST00000324938 TMEM87AQ8NBN3 555 aa25.63■■□□□ 1.69
LIMS2-201ENST00000324938 DNAJC2Q99543 621 aaKnown RBP25.63■■□□□ 1.69
LIMS2-201ENST00000324938 ALDH8A1Q9H2A2 487 aaPredicted RBP25.63■■□□□ 1.69
LIMS2-201ENST00000324938 RRAGDQ9NQL2 400 aaPredicted RBP25.63■■□□□ 1.69
LIMS2-201ENST00000324938 ATG3Q9NT62 314 aa25.63■■□□□ 1.69
LIMS2-201ENST00000324938 VSIG10Q8N0Z9 540 aa25.62■■□□□ 1.69
LIMS2-201ENST00000324938 PALLDQ8WX93 1383 aa25.62■■□□□ 1.69
LIMS2-201ENST00000324938 ST3GAL1Q11201 340 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 ME3Q16798 604 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 BLOC1S2Q6QNY1 142 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 WNK3Q9BYP7 1800 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 LRP6O75581 1613 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 TEX13AQ9BXU3 409 aaPredicted RBP25.61■■□□□ 1.69
LIMS2-201ENST00000324938 NDUFB9Q9Y6M9 179 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 DISP2A7MBM2 1401 aa25.61■■□□□ 1.69
LIMS2-201ENST00000324938 EYA2O00167 538 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 CIAO1O76071 339 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 GJB2P29033 226 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 ANKRD36CQ5JPF3 1778 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 RPS6KB1P23443 525 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 TCIRG1Q13488 830 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 ANKRD1Q15327 319 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 KBTBD3Q8NAB2 608 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 TPCN1Q9ULQ1 816 aa25.6■■□□□ 1.69
LIMS2-201ENST00000324938 F13A1P00488 732 aa25.59■■□□□ 1.69
LIMS2-201ENST00000324938 CCDC173Q0VFZ6 552 aa25.59■■□□□ 1.69
LIMS2-201ENST00000324938 LRSAM1Q6UWE0 723 aa25.59■■□□□ 1.69
LIMS2-201ENST00000324938 TICAM2Q86XR7 235 aa25.59■■□□□ 1.69
LIMS2-201ENST00000324938 SH3TC1Q8TE82 1336 aa25.59■■□□□ 1.69
LIMS2-201ENST00000324938 PRIM1P49642 420 aaKnown RBP25.58■■□□□ 1.69
LIMS2-201ENST00000324938 TRIM28Q13263 835 aaKnown RBP25.58■■□□□ 1.69
LIMS2-201ENST00000324938 PIGBQ92521 554 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 TAF6LQ9Y6J9 622 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 LAMA4Q16363 1823 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 KRT32Q14532 448 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 MCMDC2Q4G0Z9 681 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 DDX46Q7L014 1031 aaKnown RBP25.58■■□□□ 1.69
LIMS2-201ENST00000324938 USP48Q86UV5 1035 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 PPP1R9BQ96SB3 815 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 BTG4Q9NY30 223 aa25.58■■□□□ 1.69
LIMS2-201ENST00000324938 COL9A3Q14050 684 aaPredicted RBP25.57■■□□□ 1.68
LIMS2-201ENST00000324938 FOXD4L6Q3SYB3 417 aaPredicted RBP25.57■■□□□ 1.68
LIMS2-201ENST00000324938 FOXD4L3Q6VB84 417 aaPredicted RBP25.57■■□□□ 1.68
LIMS2-201ENST00000324938 ASAP1Q9ULH1 1129 aa25.57■■□□□ 1.68
LIMS2-201ENST00000324938 ATP6V1DQ9Y5K8 247 aa25.57■■□□□ 1.68
LIMS2-201ENST00000324938 LRRC24Q50LG9 513 aa25.57■■□□□ 1.68
LIMS2-201ENST00000324938 DNAJC10Q8IXB1 793 aa25.57■■□□□ 1.68
LIMS2-201ENST00000324938 SYAP1Q96A49 352 aaPredicted RBP25.57■■□□□ 1.68
LIMS2-201ENST00000324938 NEUROD6Q96NK8 337 aa25.57■■□□□ 1.68
LIMS2-201ENST00000324938 GDPD2Q9HCC8 539 aa25.57■■□□□ 1.68
LIMS2-201ENST00000324938 U3KPZ7 1027 aaPredicted RBP25.57■■□□□ 1.68
LIMS2-201ENST00000324938 COL22A1Q8NFW1 1626 aaPredicted RBP25.56■■□□□ 1.68
LIMS2-201ENST00000324938 SYCE3A1L190 88 aa25.56■■□□□ 1.68
LIMS2-201ENST00000324938 RBSNQ9H1K0 784 aa25.56■■□□□ 1.68
LIMS2-201ENST00000324938 KIF6Q6ZMV9 814 aa25.55■■□□□ 1.68
LIMS2-201ENST00000324938 ANP32BQ92688 251 aaKnown RBP25.55■■□□□ 1.68
LIMS2-201ENST00000324938 ZNF594Q96JF6 807 aaPredicted RBP25.55■■□□□ 1.68
LIMS2-201ENST00000324938 PAG1Q9NWQ8 432 aa25.55■■□□□ 1.68
LIMS2-201ENST00000324938 MTMR6Q9Y217 621 aa25.55■■□□□ 1.68
LIMS2-201ENST00000324938 COL16A1Q07092 1604 aaPredicted RBP25.55■■□□□ 1.68
LIMS2-201ENST00000324938 MYH3P11055 1940 aa25.55■■□□□ 1.68
LIMS2-201ENST00000324938 GADD45BO75293 160 aaPredicted RBP25.55■■□□□ 1.68
LIMS2-201ENST00000324938 NECAB1Q8N987 351 aa25.55■■□□□ 1.68
LIMS2-201ENST00000324938 TIMM10P62072 90 aa25.54■■□□□ 1.68
LIMS2-201ENST00000324938 TOB2Q14106 344 aaPredicted RBP25.54■■□□□ 1.68
LIMS2-201ENST00000324938 CCDC129Q6ZRS4 1044 aa25.54■■□□□ 1.68
LIMS2-201ENST00000324938 SEC62Q99442 399 aaKnown RBP25.54■■□□□ 1.68
LIMS2-201ENST00000324938 FBXO3Q9UK99 471 aa25.54■■□□□ 1.68
LIMS2-201ENST00000324938 CNPY2Q9Y2B0 182 aa25.54■■□□□ 1.68
LIMS2-201ENST00000324938 CHGBP05060 677 aa25.54■■□□□ 1.68
LIMS2-201ENST00000324938 PCCAP05165 728 aaPredicted RBP25.54■■□□□ 1.68
LIMS2-201ENST00000324938 PDIA4P13667 645 aaKnown RBP25.54■■□□□ 1.68
LIMS2-201ENST00000324938 PLA2G12BQ9BX93 195 aa25.54■■□□□ 1.68
LIMS2-201ENST00000324938 STARD3NLO95772 234 aa25.53■■□□□ 1.68
LIMS2-201ENST00000324938 TRIM44Q96DX7 344 aaPredicted RBP25.53■■□□□ 1.68
LIMS2-201ENST00000324938 BCL9O00512 1426 aa25.53■■□□□ 1.68
LIMS2-201ENST00000324938 A0A1B0GUL7 405 aa25.52■■□□□ 1.68
LIMS2-201ENST00000324938 GOLIM4O00461 696 aa25.52■■□□□ 1.68
LIMS2-201ENST00000324938 HELLSQ9NRZ9 838 aa25.52■■□□□ 1.68
LIMS2-201ENST00000324938 ZNF330Q9Y3S2 320 aaPredicted RBP25.52■■□□□ 1.68
LIMS2-201ENST00000324938 CCDC9Q9Y3X0 531 aaKnown RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms