RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.01■□□□□ 0.63
PRPF3-201ENST00000324862 PDE8AO60658 829 aa19■□□□□ 0.63
PRPF3-201ENST00000324862 TPTE2Q6XPS3 522 aa19■□□□□ 0.63
PRPF3-201ENST00000324862 LNPKQ9C0E8 428 aa19■□□□□ 0.63
PRPF3-201ENST00000324862 MMP10P09238 476 aa19■□□□□ 0.63
PRPF3-201ENST00000324862 PTPN12Q05209 780 aaKnown RBP19■□□□□ 0.63
PRPF3-201ENST00000324862 PRR5LQ6MZQ0 368 aa19■□□□□ 0.63
PRPF3-201ENST00000324862 CSF1RP07333 972 aa18.99■□□□□ 0.63
PRPF3-201ENST00000324862 RGS3P49796 1198 aa18.99■□□□□ 0.63
PRPF3-201ENST00000324862 R3HDM1Q15032 1099 aaKnown RBP18.99■□□□□ 0.63
PRPF3-201ENST00000324862 NLGN1Q8N2Q7 840 aa18.99■□□□□ 0.63
PRPF3-201ENST00000324862 CNBD1Q8NA66 436 aa18.99■□□□□ 0.63
PRPF3-201ENST00000324862 SEC31BQ9NQW1 1179 aa18.99■□□□□ 0.63
PRPF3-201ENST00000324862 GCC1Q96CN9 775 aa18.98■□□□□ 0.63
PRPF3-201ENST00000324862 COL24A1Q17RW2 1714 aa18.98■□□□□ 0.63
PRPF3-201ENST00000324862 PSDA5PKW4 1024 aaPredicted RBP18.98■□□□□ 0.63
PRPF3-201ENST00000324862 C16orf71Q8IYS4 520 aaPredicted RBP18.98■□□□□ 0.63
PRPF3-201ENST00000324862 NYXQ9GZU5 481 aa18.98■□□□□ 0.63
PRPF3-201ENST00000324862 ITGA6P23229 1130 aa18.97■□□□□ 0.63
PRPF3-201ENST00000324862 PUS3Q9BZE2 481 aaKnown RBP18.97■□□□□ 0.63
PRPF3-201ENST00000324862 IL1RAPL2Q9NP60 686 aa18.97■□□□□ 0.63
PRPF3-201ENST00000324862 PDE4AP27815 886 aa18.96■□□□□ 0.63
PRPF3-201ENST00000324862 NUCB1Q02818 461 aa18.96■□□□□ 0.63
PRPF3-201ENST00000324862 DDX60Q8IY21 1712 aaKnown RBP18.96■□□□□ 0.63
PRPF3-201ENST00000324862 LRRC24Q50LG9 513 aa18.96■□□□□ 0.63
PRPF3-201ENST00000324862 OTUD7AQ8TE49 926 aaPredicted RBP18.96■□□□□ 0.63
PRPF3-201ENST00000324862 COL4A1P02462 1669 aa18.96■□□□□ 0.63
PRPF3-201ENST00000324862 ZBTB7AO95365 584 aa18.95■□□□□ 0.62
PRPF3-201ENST00000324862 CCDC57Q2TAC2 916 aa18.95■□□□□ 0.62
PRPF3-201ENST00000324862 CHD1LQ86WJ1 897 aa18.95■□□□□ 0.62
PRPF3-201ENST00000324862 OS9Q13438 667 aaPredicted RBP18.95■□□□□ 0.62
PRPF3-201ENST00000324862 IFIT5Q13325 482 aaKnown RBP18.94■□□□□ 0.62
PRPF3-201ENST00000324862 SLC10A5Q5PT55 438 aa18.94■□□□□ 0.62
PRPF3-201ENST00000324862 SLC51AQ86UW1 340 aa18.94■□□□□ 0.62
PRPF3-201ENST00000324862 COPRSQ9NQ92 184 aa18.94■□□□□ 0.62
PRPF3-201ENST00000324862 NOP58Q9Y2X3 529 aaKnown RBP18.94■□□□□ 0.62
PRPF3-201ENST00000324862 UTRNP46939 3433 aa18.94■□□□□ 0.62
PRPF3-201ENST00000324862 SASH1O94885 1247 aa18.94■□□□□ 0.62
PRPF3-201ENST00000324862 TNRC6CQ9HCJ0 1690 aaKnown RBP18.93■□□□□ 0.62
PRPF3-201ENST00000324862 RHPN1Q8TCX5 695 aa18.93■□□□□ 0.62
PRPF3-201ENST00000324862 NLRP3Q96P20 1036 aa18.93■□□□□ 0.62
PRPF3-201ENST00000324862 PARP3Q9Y6F1 533 aa18.92■□□□□ 0.62
PRPF3-201ENST00000324862 G3BP1Q13283 466 aaKnown RBP eCLIP18.92■□□□□ 0.62
PRPF3-201ENST00000324862 ATG9AQ7Z3C6 839 aa18.92■□□□□ 0.62
PRPF3-201ENST00000324862 LRRCC1Q9C099 1032 aa18.92■□□□□ 0.62
PRPF3-201ENST00000324862 ANKRD18BA2A2Z9 1011 aa18.91■□□□□ 0.62
PRPF3-201ENST00000324862 CCDC152Q4G0S7 254 aa18.91■□□□□ 0.62
PRPF3-201ENST00000324862 TAF7LQ5H9L4 462 aa18.91■□□□□ 0.62
PRPF3-201ENST00000324862 ATF5Q9Y2D1 282 aaPredicted RBP18.91■□□□□ 0.62
PRPF3-201ENST00000324862 SF3B3Q15393 1217 aaKnown RBP18.91■□□□□ 0.62
PRPF3-201ENST00000324862 CELF1Q92879 486 aaKnown RBP18.91■□□□□ 0.62
PRPF3-201ENST00000324862 ST5P78524 1137 aa18.9■□□□□ 0.62
PRPF3-201ENST00000324862 TSHZ3Q63HK5 1081 aa18.9■□□□□ 0.62
PRPF3-201ENST00000324862 TFCP2Q12800 502 aa18.9■□□□□ 0.62
PRPF3-201ENST00000324862 LDHAL6AQ6ZMR3 332 aa18.89■□□□□ 0.61
PRPF3-201ENST00000324862 QSER1Q2KHR3 1735 aa18.89■□□□□ 0.61
PRPF3-201ENST00000324862 EYA2O00167 538 aa18.89■□□□□ 0.61
PRPF3-201ENST00000324862 MYH3P11055 1940 aa18.89■□□□□ 0.61
PRPF3-201ENST00000324862 TAF1P21675 1872 aa18.88■□□□□ 0.61
PRPF3-201ENST00000324862 KIF1BPQ96EK5 621 aa18.88■□□□□ 0.61
PRPF3-201ENST00000324862 RAB11FIP3O75154 756 aa18.88■□□□□ 0.61
PRPF3-201ENST00000324862 LAMB2P55268 1798 aa18.87■□□□□ 0.61
PRPF3-201ENST00000324862 SNAP23O00161 211 aa18.87■□□□□ 0.61
PRPF3-201ENST00000324862 HELBQ8NG08 1087 aaPredicted RBP18.87■□□□□ 0.61
PRPF3-201ENST00000324862 CNNM1Q9NRU3 951 aa18.87■□□□□ 0.61
PRPF3-201ENST00000324862 TLR7Q9NYK1 1049 aaKnown RBP18.87■□□□□ 0.61
PRPF3-201ENST00000324862 HSP90B1P14625 803 aaKnown RBP18.86■□□□□ 0.61
PRPF3-201ENST00000324862 EAF2Q96CJ1 260 aaPredicted RBP18.86■□□□□ 0.61
PRPF3-201ENST00000324862 HSP90AB4PQ58FF6 505 aa18.86■□□□□ 0.61
PRPF3-201ENST00000324862 CCDC8Q9H0W5 538 aaPredicted RBP18.86■□□□□ 0.61
PRPF3-201ENST00000324862 ZBTB47Q9UFB7 747 aaPredicted RBP18.86■□□□□ 0.61
PRPF3-201ENST00000324862 RIPOR2Q9Y4F9 1068 aa18.86■□□□□ 0.61
PRPF3-201ENST00000324862 WTIPA6NIX2 430 aaPredicted RBP18.85■□□□□ 0.61
PRPF3-201ENST00000324862 CASZ1Q86V15 1759 aa18.85■□□□□ 0.61
PRPF3-201ENST00000324862 CRY2Q49AN0 593 aa18.84■□□□□ 0.61
PRPF3-201ENST00000324862 PLEKHM2Q8IWE5 1019 aa18.84■□□□□ 0.61
PRPF3-201ENST00000324862 SLC16A10Q8TF71 515 aa18.84■□□□□ 0.61
PRPF3-201ENST00000324862 MPHOSPH8Q99549 860 aa18.84■□□□□ 0.61
PRPF3-201ENST00000324862 RTL9Q8NET4 1388 aa18.84■□□□□ 0.61
PRPF3-201ENST00000324862 TAF5LO75529 589 aa18.84■□□□□ 0.61
PRPF3-201ENST00000324862 IL15P40933 162 aaPredicted RBP18.84■□□□□ 0.61
PRPF3-201ENST00000324862 DDX46Q7L014 1031 aaKnown RBP18.84■□□□□ 0.61
PRPF3-201ENST00000324862 AACSQ86V21 672 aa18.84■□□□□ 0.61
PRPF3-201ENST00000324862 BRIP1Q9BX63 1249 aa18.84■□□□□ 0.61
PRPF3-201ENST00000324862 RIC1Q4ADV7 1423 aa18.84■□□□□ 0.61
PRPF3-201ENST00000324862 IGHMBP2P38935 993 aaKnown RBP18.83■□□□□ 0.61
PRPF3-201ENST00000324862 TIMM10P62072 90 aa18.83■□□□□ 0.61
PRPF3-201ENST00000324862 ERC1Q8IUD2 1116 aa18.83■□□□□ 0.61
PRPF3-201ENST00000324862 NRXN2Q9P2S2 1712 aa18.83■□□□□ 0.61
PRPF3-201ENST00000324862 CIAO1O76071 339 aa18.83■□□□□ 0.6
PRPF3-201ENST00000324862 CHRNA5P30532 468 aa18.83■□□□□ 0.6
PRPF3-201ENST00000324862 METTL24Q5JXM2 366 aa18.83■□□□□ 0.6
PRPF3-201ENST00000324862 ANKRD18AQ8IVF6 992 aa18.83■□□□□ 0.6
PRPF3-201ENST00000324862 RPGRQ92834 1020 aaKnown RBP18.83■□□□□ 0.6
PRPF3-201ENST00000324862 ANKRD31Q8N7Z5 1873 aa18.82■□□□□ 0.6
PRPF3-201ENST00000324862 RPS8P62241 208 aaKnown RBP18.82■□□□□ 0.6
PRPF3-201ENST00000324862 TNNI3KQ59H18 835 aa18.82■□□□□ 0.6
PRPF3-201ENST00000324862 CLASRPQ8N2M8 674 aaKnown RBP18.82■□□□□ 0.6
PRPF3-201ENST00000324862 CDC5LQ99459 802 aaKnown RBP18.82■□□□□ 0.6
PRPF3-201ENST00000324862 MTFR1LQ9H019 292 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms