RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 RRS1Q15050 365 aaKnown RBP10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 CADPS2Q86UW7 1296 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 ZFYVE1Q9HBF4 777 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 C6orf229H3BNL8 230 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 MCM3P25205 808 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 CETN1Q12798 172 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 GSDMBQ8TAX9 411 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 PPANQ9NQ55 473 aaKnown RBP10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 ERBINQ96RT1 1412 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 GNAI3P08754 354 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 BLVRAP53004 296 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 PANK2Q9BZ23 570 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 TRIM7Q9C029 511 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 SYF2O95926 243 aaKnown RBP10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 ST5P78524 1137 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 SH2D4BQ5SQS7 431 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 NFKBIL1Q9UBC1 381 aaPredicted RBP10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 TRIM35Q9UPQ4 493 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 EPRSP07814 1512 aaKnown RBP10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 ATRIPQ8WXE1 791 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 NUDT16Q96DE0 195 aaKnown RBP10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 NAA15Q9BXJ9 866 aaKnown RBP10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 JADE2Q9NQC1 790 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 PHF8Q9UPP1 1060 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 SYNJ1O43426 1573 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 SLFN5Q08AF3 891 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 CCDC82Q8N4S0 544 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 GCC1Q96CN9 775 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 FBXW4P57775 412 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 CAVIN4Q5BKX8 364 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 TSPYL2Q9H2G4 693 aaPredicted RBP10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 MRPL46Q9H2W6 279 aaKnown RBP10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 EHMT1Q9H9B1 1298 aa10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 RRAGDQ9NQL2 400 aaPredicted RBP10.07□□□□□ -0.8
SH3TC2-201ENST00000323829 PLS1Q14651 629 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 TMTC4Q5T4D3 741 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 C10orf67Q8IYJ2 551 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 TRIM6Q9C030 488 aaPredicted RBP10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 VAT1LQ9HCJ6 419 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 ZSCAN32Q9NX65 697 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 TTC30BQ8N4P2 665 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 TBC1D32Q96NH3 1257 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 ZNF853P0CG23 659 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 PDCP20941 246 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 TNPO1Q92973 898 aaKnown RBP10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 SPECC1L-ADORA2AF8WAN1 911 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 PLCB3Q01970 1234 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 CEP85LQ5SZL2 805 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 MRRFQ96E11 262 aaKnown RBP10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 NSRP1Q9H0G5 558 aaKnown RBP10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 ZSCAN25Q6NSZ9 544 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 TCP11L2Q8N4U5 519 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 RNF34Q969K3 372 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 TRMT1Q9NXH9 659 aaKnown RBP10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 CEP131Q9UPN4 1083 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 NAIPQ13075 1403 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 MTIF2P46199 727 aaKnown RBP10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 CCDC40Q4G0X9 1142 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 SPOUT1Q5T280 376 aaKnown RBP10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 RUFY3Q7L099 469 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 FMNL3Q8IVF7 1028 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 ANKRD35Q8N283 1001 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 BEGAINQ9BUH8 593 aa10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 RNF216Q9NWF9 866 aaPredicted RBP10.06□□□□□ -0.8
SH3TC2-201ENST00000323829 AMOTQ4VCS5 1084 aa10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 RAB3IPQ96QF0 476 aaPredicted RBP10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 STX6O43752 255 aa10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 CKAP4Q07065 602 aaKnown RBP10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 FOXD4Q12950 439 aaPredicted RBP10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 MVPQ14764 893 aaKnown RBP10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 ZSWIM4Q9H7M6 989 aa10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 RNF8O76064 485 aa10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 MCM10Q7L590 875 aa10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 MAK16Q9BXY0 300 aaKnown RBP10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 KCNK9Q9NPC2 374 aa10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 CPSF2Q9P2I0 782 aaKnown RBP10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 TXNDC9O14530 226 aa10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 HNRNPCL2B2RXH8 293 aa10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 HNRNPCL1O60812 293 aaKnown RBP10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 VPS41P49754 854 aa10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 LARP1BQ659C4 914 aaKnown RBP10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 PRIMPOLQ96LW4 560 aa10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 MAPKBP1O60336 1514 aa10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 C9orf84Q5VXU9 1444 aa10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 UTP14CQ5TAP6 766 aaKnown RBP10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 TBC1D31Q96DN5 1066 aa10.05□□□□□ -0.8
SH3TC2-201ENST00000323829 HSPA2P54652 639 aa10.04□□□□□ -0.8
SH3TC2-201ENST00000323829 CIB2O75838 187 aa10.04□□□□□ -0.8
SH3TC2-201ENST00000323829 ACSBG1Q96GR2 724 aa10.04□□□□□ -0.8
SH3TC2-201ENST00000323829 NUP62CLQ9H1M0 184 aa10.04□□□□□ -0.8
SH3TC2-201ENST00000323829 LIMCH1Q9UPQ0 1083 aa10.04□□□□□ -0.8
SH3TC2-201ENST00000323829 MAP3K1Q13233 1512 aa10.04□□□□□ -0.8
SH3TC2-201ENST00000323829 GIPC1O14908 333 aa10.04□□□□□ -0.8
SH3TC2-201ENST00000323829 SLC4A2P04920 1241 aa10.04□□□□□ -0.8
SH3TC2-201ENST00000323829 CASTP20810 708 aaKnown RBP10.04□□□□□ -0.8
SH3TC2-201ENST00000323829 RAP1GDS1P52306 607 aa10.04□□□□□ -0.8
SH3TC2-201ENST00000323829 IL1RL1Q01638 556 aa10.04□□□□□ -0.8
SH3TC2-201ENST00000323829 TMEM266Q2M3C6 531 aa10.04□□□□□ -0.8
SH3TC2-201ENST00000323829 TBC1D5Q92609 795 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms