RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 AK9Q5TCS8 1911 aa22.49■■□□□ 1.19
USP39-201ENST00000323701 ERC2O15083 957 aa22.49■■□□□ 1.19
USP39-201ENST00000323701 SRP68Q9UHB9 627 aaKnown RBP22.49■■□□□ 1.19
USP39-201ENST00000323701 TAF1LQ8IZX4 1826 aa22.48■■□□□ 1.19
USP39-201ENST00000323701 ITGA6P23229 1130 aa22.48■■□□□ 1.19
USP39-201ENST00000323701 IL15P40933 162 aaPredicted RBP22.48■■□□□ 1.19
USP39-201ENST00000323701 TIMM10P62072 90 aa22.48■■□□□ 1.19
USP39-201ENST00000323701 RC3H1Q5TC82 1133 aaKnown RBP22.48■■□□□ 1.19
USP39-201ENST00000323701 TBC1D2Q9BYX2 928 aa22.48■■□□□ 1.19
USP39-201ENST00000323701 BOLA2Q9H3K6 86 aa22.48■■□□□ 1.19
USP39-201ENST00000323701 RPS6KA4O75676 772 aa22.48■■□□□ 1.19
USP39-201ENST00000323701 NTSR2O95665 410 aa22.48■■□□□ 1.19
USP39-201ENST00000323701 IFIT5Q13325 482 aaKnown RBP22.48■■□□□ 1.19
USP39-201ENST00000323701 GPATCH3Q96I76 525 aa22.48■■□□□ 1.19
USP39-201ENST00000323701 UTP14AQ9BVJ6 771 aaKnown RBP22.48■■□□□ 1.19
USP39-201ENST00000323701 NDUFB9Q9Y6M9 179 aa22.48■■□□□ 1.19
USP39-201ENST00000323701 MYH3P11055 1940 aa22.47■■□□□ 1.19
USP39-201ENST00000323701 PDE8AO60658 829 aa22.47■■□□□ 1.19
USP39-201ENST00000323701 CIAO1O76071 339 aa22.46■■□□□ 1.19
USP39-201ENST00000323701 TRIM37O94972 964 aa22.46■■□□□ 1.19
USP39-201ENST00000323701 CNTROBQ8N137 903 aa22.46■■□□□ 1.19
USP39-201ENST00000323701 EDC3Q96F86 508 aaKnown RBP22.46■■□□□ 1.19
USP39-201ENST00000323701 SH3TC1Q8TE82 1336 aa22.46■■□□□ 1.19
USP39-201ENST00000323701 USPL1Q5W0Q7 1092 aa22.45■■□□□ 1.18
USP39-201ENST00000323701 BICDL1Q6ZP65 573 aa22.45■■□□□ 1.18
USP39-201ENST00000323701 FAM196AQ6ZSG2 479 aa22.45■■□□□ 1.18
USP39-201ENST00000323701 PARP10Q53GL7 1025 aa22.44■■□□□ 1.18
USP39-201ENST00000323701 TBC1D9BQ66K14 1250 aa22.44■■□□□ 1.18
USP39-201ENST00000323701 CLEC4GQ6UXB4 293 aa22.44■■□□□ 1.18
USP39-201ENST00000323701 NEUROD6Q96NK8 337 aa22.44■■□□□ 1.18
USP39-201ENST00000323701 DDX60Q8IY21 1712 aaKnown RBP22.44■■□□□ 1.18
USP39-201ENST00000323701 ARHGEF1Q92888 912 aaKnown RBP22.43■■□□□ 1.18
USP39-201ENST00000323701 REC8O95072 547 aa22.43■■□□□ 1.18
USP39-201ENST00000323701 TAF7LQ5H9L4 462 aa22.43■■□□□ 1.18
USP39-201ENST00000323701 NARFQ9UHQ1 456 aa22.43■■□□□ 1.18
USP39-201ENST00000323701 ZNF652Q9Y2D9 606 aa22.43■■□□□ 1.18
USP39-201ENST00000323701 RIPOR2Q9Y4F9 1068 aa22.43■■□□□ 1.18
USP39-201ENST00000323701 ZNF609O15014 1411 aa22.43■■□□□ 1.18
USP39-201ENST00000323701 C4BP0C0L5 1744 aa22.43■■□□□ 1.18
USP39-201ENST00000323701 CD2BP2O95400 341 aaKnown RBP22.42■■□□□ 1.18
USP39-201ENST00000323701 RBM6P78332 1123 aaKnown RBP22.42■■□□□ 1.18
USP39-201ENST00000323701 SCN7AQ01118 1682 aa22.42■■□□□ 1.18
USP39-201ENST00000323701 RIC1Q4ADV7 1423 aa22.42■■□□□ 1.18
USP39-201ENST00000323701 A0A1B0GUL7 405 aa22.42■■□□□ 1.18
USP39-201ENST00000323701 ATP5JP18859 108 aa22.42■■□□□ 1.18
USP39-201ENST00000323701 CWC27Q6UX04 472 aaKnown RBP22.42■■□□□ 1.18
USP39-201ENST00000323701 SEC31BQ9NQW1 1179 aa22.42■■□□□ 1.18
USP39-201ENST00000323701 RTCBQ9Y3I0 505 aaKnown RBP22.42■■□□□ 1.18
USP39-201ENST00000323701 ANKRD18BA2A2Z9 1011 aa22.41■■□□□ 1.18
USP39-201ENST00000323701 PHF14O94880 888 aa22.41■■□□□ 1.18
USP39-201ENST00000323701 ZNF772Q68DY9 489 aaPredicted RBP22.41■■□□□ 1.18
USP39-201ENST00000323701 LDHAL6AQ6ZMR3 332 aa22.41■■□□□ 1.18
USP39-201ENST00000323701 C3orf67Q6ZVT6 689 aa22.41■■□□□ 1.18
USP39-201ENST00000323701 EVI5LQ96CN4 794 aa22.41■■□□□ 1.18
USP39-201ENST00000323701 GPR108Q9NPR9 543 aa22.41■■□□□ 1.18
USP39-201ENST00000323701 ANO2Q9NQ90 1003 aa22.41■■□□□ 1.18
USP39-201ENST00000323701 DAXXQ9UER7 740 aaPredicted RBP22.41■■□□□ 1.18
USP39-201ENST00000323701 COL4A1P02462 1669 aa22.41■■□□□ 1.18
USP39-201ENST00000323701 ERFEQ4G0M1 354 aa22.4■■□□□ 1.18
USP39-201ENST00000323701 CEP126Q9P2H0 1117 aa22.4■■□□□ 1.18
USP39-201ENST00000323701 SGSM2O43147 1006 aa22.4■■□□□ 1.18
USP39-201ENST00000323701 ADORA1P30542 326 aa22.4■■□□□ 1.18
USP39-201ENST00000323701 CHGBP05060 677 aa22.39■■□□□ 1.18
USP39-201ENST00000323701 PROM2Q8N271 834 aa22.39■■□□□ 1.17
USP39-201ENST00000323701 FBXO3Q9UK99 471 aa22.39■■□□□ 1.17
USP39-201ENST00000323701 BECN1Q14457 450 aa22.38■■□□□ 1.17
USP39-201ENST00000323701 AK7Q96M32 723 aa22.38■■□□□ 1.17
USP39-201ENST00000323701 FAM227BQ96M60 508 aa22.38■■□□□ 1.17
USP39-201ENST00000323701 PALD1Q9ULE6 856 aa22.38■■□□□ 1.17
USP39-201ENST00000323701 VGLL2Q8N8G2 317 aa22.38■■□□□ 1.17
USP39-201ENST00000323701 C4AP0C0L4 1744 aa22.37■■□□□ 1.17
USP39-201ENST00000323701 DNAJC2Q99543 621 aaKnown RBP22.37■■□□□ 1.17
USP39-201ENST00000323701 CNNM1Q9NRU3 951 aa22.37■■□□□ 1.17
USP39-201ENST00000323701 RGS17Q9UGC6 210 aaPredicted RBP22.37■■□□□ 1.17
USP39-201ENST00000323701 ZPR1O75312 459 aa22.36■■□□□ 1.17
USP39-201ENST00000323701 METTL24Q5JXM2 366 aa22.36■■□□□ 1.17
USP39-201ENST00000323701 CCDC24Q8N4L8 307 aa22.36■■□□□ 1.17
USP39-201ENST00000323701 HAUS7Q99871 368 aa22.36■■□□□ 1.17
USP39-201ENST00000323701 DIAPH3Q9NSV4 1193 aa22.36■■□□□ 1.17
USP39-201ENST00000323701 ABCC12Q96J65 1359 aa22.36■■□□□ 1.17
USP39-201ENST00000323701 EIF5BO60841 1220 aaKnown RBP22.35■■□□□ 1.17
USP39-201ENST00000323701 SPRYD3Q8NCJ5 442 aa22.35■■□□□ 1.17
USP39-201ENST00000323701 HELBQ8NG08 1087 aaPredicted RBP22.35■■□□□ 1.17
USP39-201ENST00000323701 XAGE2Q96GT9 111 aa22.35■■□□□ 1.17
USP39-201ENST00000323701 FSD1Q9BTV5 496 aa22.35■■□□□ 1.17
USP39-201ENST00000323701 LRP5O75197 1615 aa22.35■■□□□ 1.17
USP39-201ENST00000323701 LAMB2P55268 1798 aa22.35■■□□□ 1.17
USP39-201ENST00000323701 NMIQ13287 307 aaPredicted RBP22.35■■□□□ 1.17
USP39-201ENST00000323701 LSG1Q9H089 658 aaKnown RBP22.35■■□□□ 1.17
USP39-201ENST00000323701 SNAP23O00161 211 aa22.34■■□□□ 1.17
USP39-201ENST00000323701 TRAPPC3LQ5T215 181 aa22.34■■□□□ 1.17
USP39-201ENST00000323701 DDX46Q7L014 1031 aaKnown RBP22.34■■□□□ 1.17
USP39-201ENST00000323701 A0A0D9SFI3 127 aa22.33■■□□□ 1.17
USP39-201ENST00000323701 TAF1P21675 1872 aa22.33■■□□□ 1.17
USP39-201ENST00000323701 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.33■■□□□ 1.16
USP39-201ENST00000323701 RFC4P35249 363 aa22.33■■□□□ 1.16
USP39-201ENST00000323701 SNX21Q969T3 373 aa22.33■■□□□ 1.16
USP39-201ENST00000323701 SETDB2Q96T68 719 aa22.33■■□□□ 1.16
USP39-201ENST00000323701 RGL2O15211 777 aa22.32■■□□□ 1.16
USP39-201ENST00000323701 PTH1RQ03431 593 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms