RNA–Protein interactions for RNA: ENST00000320393.8

BCKDHB-201, Transcript of branched chain keto acid dehydrogenase E1 subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCKDHB, Length 3,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHB-201ENST00000320393 CHMP4CQ96CF2 233 aa16.27■□□□□ 0.2
BCKDHB-201ENST00000320393 NRDCO43847 1150 aa16.27■□□□□ 0.19
BCKDHB-201ENST00000320393 LMOD1P29536 600 aaPredicted RBP16.27■□□□□ 0.19
BCKDHB-201ENST00000320393 DDX19AQ9NUU7 478 aaKnown RBP16.27■□□□□ 0.19
BCKDHB-201ENST00000320393 ZSWIM6Q9HCJ5 1215 aa16.26■□□□□ 0.19
BCKDHB-201ENST00000320393 RXRAP19793 462 aa16.26■□□□□ 0.19
BCKDHB-201ENST00000320393 DMTNQ08495 405 aa16.26■□□□□ 0.19
BCKDHB-201ENST00000320393 ERC1Q8IUD2 1116 aa16.26■□□□□ 0.19
BCKDHB-201ENST00000320393 ST7Q9NRC1 585 aa16.26■□□□□ 0.19
BCKDHB-201ENST00000320393 GJB4Q9NTQ9 266 aa16.26■□□□□ 0.19
BCKDHB-201ENST00000320393 NPHP3Q7Z494 1330 aa16.26■□□□□ 0.19
BCKDHB-201ENST00000320393 GRM8O00222 908 aa16.26■□□□□ 0.19
BCKDHB-201ENST00000320393 MARCKSP29966 332 aaPredicted RBP16.26■□□□□ 0.19
BCKDHB-201ENST00000320393 GOLGA8FQ08AF8 430 aa16.26■□□□□ 0.19
BCKDHB-201ENST00000320393 GOLGA8DPQ0D2H9 430 aa16.26■□□□□ 0.19
BCKDHB-201ENST00000320393 ANKRD1Q15327 319 aa16.26■□□□□ 0.19
BCKDHB-201ENST00000320393 CDK12Q9NYV4 1490 aaPredicted RBP16.25■□□□□ 0.19
BCKDHB-201ENST00000320393 VWDEQ8N2E2 1590 aa16.25■□□□□ 0.19
BCKDHB-201ENST00000320393 EIF4A1P60842 406 aaKnown RBP16.25■□□□□ 0.19
BCKDHB-201ENST00000320393 NCBP1Q09161 790 aaKnown RBP16.25■□□□□ 0.19
BCKDHB-201ENST00000320393 TFCP2Q12800 502 aa16.25■□□□□ 0.19
BCKDHB-201ENST00000320393 COPS6Q7L5N1 327 aa16.25■□□□□ 0.19
BCKDHB-201ENST00000320393 MAP3K5Q99683 1374 aa16.25■□□□□ 0.19
BCKDHB-201ENST00000320393 RPS6KB1P23443 525 aa16.25■□□□□ 0.19
BCKDHB-201ENST00000320393 TIMM10P62072 90 aa16.25■□□□□ 0.19
BCKDHB-201ENST00000320393 SYT10Q6XYQ8 523 aa16.25■□□□□ 0.19
BCKDHB-201ENST00000320393 PGBD1Q96JS3 809 aa16.25■□□□□ 0.19
BCKDHB-201ENST00000320393 CFAP45Q9UL16 551 aa16.25■□□□□ 0.19
BCKDHB-201ENST00000320393 SALL3Q9BXA9 1300 aa16.25■□□□□ 0.19
BCKDHB-201ENST00000320393 PLEKHO1Q53GL0 409 aaPredicted RBP16.24■□□□□ 0.19
BCKDHB-201ENST00000320393 XAGE3Q8WTP9 111 aa16.24■□□□□ 0.19
BCKDHB-201ENST00000320393 DBNDD2Q9BQY9 259 aa16.24■□□□□ 0.19
BCKDHB-201ENST00000320393 AATKQ6ZMQ8 1374 aa16.24■□□□□ 0.19
BCKDHB-201ENST00000320393 ST3GAL1Q11201 340 aa16.24■□□□□ 0.19
BCKDHB-201ENST00000320393 SYNE3Q6ZMZ3 975 aa16.24■□□□□ 0.19
BCKDHB-201ENST00000320393 CEP57L1Q8IYX8 460 aa16.24■□□□□ 0.19
BCKDHB-201ENST00000320393 MNS1Q8NEH6 495 aa16.24■□□□□ 0.19
BCKDHB-201ENST00000320393 ARHGEF28Q8N1W1 1705 aaKnown RBP16.24■□□□□ 0.19
BCKDHB-201ENST00000320393 CRB1P82279 1406 aa16.24■□□□□ 0.19
BCKDHB-201ENST00000320393 GPHNQ9NQX3 736 aaPredicted RBP16.24■□□□□ 0.19
BCKDHB-201ENST00000320393 URI1O94763 535 aaPredicted RBP16.23■□□□□ 0.19
BCKDHB-201ENST00000320393 SASH1O94885 1247 aa16.23■□□□□ 0.19
BCKDHB-201ENST00000320393 SERPINC1P01008 464 aa16.23■□□□□ 0.19
BCKDHB-201ENST00000320393 TAF7LQ5H9L4 462 aa16.23■□□□□ 0.19
BCKDHB-201ENST00000320393 ALKQ9UM73 1620 aa16.23■□□□□ 0.19
BCKDHB-201ENST00000320393 PPLO60437 1756 aa16.23■□□□□ 0.19
BCKDHB-201ENST00000320393 DEPDC5O75140 1603 aa16.23■□□□□ 0.19
BCKDHB-201ENST00000320393 USP28Q96RU2 1077 aa16.23■□□□□ 0.19
BCKDHB-201ENST00000320393 CLSTN2Q9H4D0 955 aa16.23■□□□□ 0.19
BCKDHB-201ENST00000320393 IFNKQ9P0W0 207 aa16.23■□□□□ 0.19
BCKDHB-201ENST00000320393 TTC5Q8N0Z6 440 aa16.22■□□□□ 0.19
BCKDHB-201ENST00000320393 KIF18AQ8NI77 898 aa16.22■□□□□ 0.19
BCKDHB-201ENST00000320393 A0A087WZG4 1122 aa16.22■□□□□ 0.19
BCKDHB-201ENST00000320393 PTPDC1A2A3K4 754 aa16.22■□□□□ 0.19
BCKDHB-201ENST00000320393 NECTIN1Q15223 517 aa16.22■□□□□ 0.19
BCKDHB-201ENST00000320393 SMTNL1A8MU46 457 aa16.22■□□□□ 0.19
BCKDHB-201ENST00000320393 KSR2Q6VAB6 950 aa16.22■□□□□ 0.19
BCKDHB-201ENST00000320393 DNAI1Q9UI46 699 aa16.22■□□□□ 0.19
BCKDHB-201ENST00000320393 HIP1O00291 1037 aa16.21■□□□□ 0.19
BCKDHB-201ENST00000320393 ERCC6LQ2NKX8 1250 aa16.21■□□□□ 0.19
BCKDHB-201ENST00000320393 CFAP100Q494V2 611 aa16.21■□□□□ 0.19
BCKDHB-201ENST00000320393 KNDC1Q76NI1 1749 aa16.21■□□□□ 0.19
BCKDHB-201ENST00000320393 TTC41PQ6P2S7 1318 aa16.21■□□□□ 0.19
BCKDHB-201ENST00000320393 CPSF1Q10570 1443 aaKnown RBP16.21■□□□□ 0.19
BCKDHB-201ENST00000320393 A0A0G2JLW4 131 aa16.21■□□□□ 0.19
BCKDHB-201ENST00000320393 GTF2F1P35269 517 aaKnown RBP eCLIP16.21■□□□□ 0.19
BCKDHB-201ENST00000320393 SFPQP23246 707 aaKnown RBP eCLIP16.21■□□□□ 0.18
BCKDHB-201ENST00000320393 SNW1Q13573 536 aaKnown RBP16.21■□□□□ 0.18
BCKDHB-201ENST00000320393 ATP7BP35670 1465 aa16.2■□□□□ 0.18
BCKDHB-201ENST00000320393 MLH3Q9UHC1 1453 aa16.2■□□□□ 0.18
BCKDHB-201ENST00000320393 STX1AQ16623 288 aa16.2■□□□□ 0.18
BCKDHB-201ENST00000320393 KCNA6P17658 529 aa16.2■□□□□ 0.18
BCKDHB-201ENST00000320393 TPM4P67936 248 aa16.2■□□□□ 0.18
BCKDHB-201ENST00000320393 HDAC5Q9UQL6 1122 aa16.2■□□□□ 0.18
BCKDHB-201ENST00000320393 TOB2Q14106 344 aaPredicted RBP16.2■□□□□ 0.18
BCKDHB-201ENST00000320393 TMEM87AQ8NBN3 555 aa16.2■□□□□ 0.18
BCKDHB-201ENST00000320393 SPTLC3Q9NUV7 552 aa16.2■□□□□ 0.18
BCKDHB-201ENST00000320393 POLA2Q14181 598 aa16.19■□□□□ 0.18
BCKDHB-201ENST00000320393 MAP4K1Q92918 833 aa16.19■□□□□ 0.18
BCKDHB-201ENST00000320393 ZNF594Q96JF6 807 aaPredicted RBP16.19■□□□□ 0.18
BCKDHB-201ENST00000320393 EPHA10Q5JZY3 1008 aa16.19■□□□□ 0.18
BCKDHB-201ENST00000320393 SPECC1Q5M775 1068 aa16.19■□□□□ 0.18
BCKDHB-201ENST00000320393 NFATC2IPQ8NCF5 419 aa16.19■□□□□ 0.18
BCKDHB-201ENST00000320393 BBXQ8WY36 941 aaPredicted RBP16.19■□□□□ 0.18
BCKDHB-201ENST00000320393 RAPGEF4Q8WZA2 1011 aa16.19■□□□□ 0.18
BCKDHB-201ENST00000320393 PIK3C2BO00750 1634 aa16.19■□□□□ 0.18
BCKDHB-201ENST00000320393 SCRN1Q12765 414 aa16.18■□□□□ 0.18
BCKDHB-201ENST00000320393 NAT10Q9H0A0 1025 aaKnown RBP16.18■□□□□ 0.18
BCKDHB-201ENST00000320393 ZBTB3Q9H5J0 574 aa16.18■□□□□ 0.18
BCKDHB-201ENST00000320393 ANO10Q9NW15 660 aa16.18■□□□□ 0.18
BCKDHB-201ENST00000320393 LMBR1LQ6UX01 489 aa16.18■□□□□ 0.18
BCKDHB-201ENST00000320393 LRRC8AQ8IWT6 810 aa16.18■□□□□ 0.18
BCKDHB-201ENST00000320393 FUCA2Q9BTY2 467 aa16.18■□□□□ 0.18
BCKDHB-201ENST00000320393 EPC1Q9H2F5 836 aa16.18■□□□□ 0.18
BCKDHB-201ENST00000320393 SSH2Q76I76 1423 aa16.18■□□□□ 0.18
BCKDHB-201ENST00000320393 SBNO1A3KN83 1393 aa16.18■□□□□ 0.18
BCKDHB-201ENST00000320393 ZNF396Q96N95 335 aaPredicted RBP16.18■□□□□ 0.18
BCKDHB-201ENST00000320393 IGSF1Q8N6C5 1336 aa16.17■□□□□ 0.18
BCKDHB-201ENST00000320393 CYP21A2P08686 494 aa16.17■□□□□ 0.18
BCKDHB-201ENST00000320393 NFXL1Q6ZNB6 911 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms