RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 RBM8AQ9Y5S9 174 aaKnown RBP18.54■□□□□ 0.56
SHROOM1-201ENST00000319854 BCL2L12Q9HB09 334 aa18.54■□□□□ 0.56
SHROOM1-201ENST00000319854 SLAIN2Q9P270 581 aa18.54■□□□□ 0.56
SHROOM1-201ENST00000319854 HMGN5P82970 282 aaKnown RBP18.54■□□□□ 0.56
SHROOM1-201ENST00000319854 DDX46Q7L014 1031 aaKnown RBP18.54■□□□□ 0.56
SHROOM1-201ENST00000319854 ZNF594Q96JF6 807 aaPredicted RBP18.54■□□□□ 0.56
SHROOM1-201ENST00000319854 CUL4AQ13619 759 aa18.53■□□□□ 0.56
SHROOM1-201ENST00000319854 CCDC129Q6ZRS4 1044 aa18.53■□□□□ 0.56
SHROOM1-201ENST00000319854 DBNDD2Q9BQY9 259 aa18.53■□□□□ 0.56
SHROOM1-201ENST00000319854 ZNF589Q86UQ0 364 aaPredicted RBP18.53■□□□□ 0.56
SHROOM1-201ENST00000319854 DBNLQ9UJU6 430 aaKnown RBP18.53■□□□□ 0.56
SHROOM1-201ENST00000319854 TCHHQ07283 1943 aa18.53■□□□□ 0.56
SHROOM1-201ENST00000319854 ADCY5O95622 1261 aa18.52■□□□□ 0.56
SHROOM1-201ENST00000319854 PDE4CQ08493 712 aa18.52■□□□□ 0.56
SHROOM1-201ENST00000319854 SEC62Q99442 399 aaKnown RBP18.52■□□□□ 0.56
SHROOM1-201ENST00000319854 PDRG1Q9NUG6 133 aa18.52■□□□□ 0.56
SHROOM1-201ENST00000319854 PTPN12Q05209 780 aaKnown RBP18.52■□□□□ 0.56
SHROOM1-201ENST00000319854 LRP10Q7Z4F1 713 aa18.52■□□□□ 0.56
SHROOM1-201ENST00000319854 STK3Q13188 491 aa18.52■□□□□ 0.55
SHROOM1-201ENST00000319854 USP48Q86UV5 1035 aa18.52■□□□□ 0.55
SHROOM1-201ENST00000319854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.52■□□□□ 0.55
SHROOM1-201ENST00000319854 KIF3AQ9Y496 699 aa18.52■□□□□ 0.55
SHROOM1-201ENST00000319854 TIMM10P62072 90 aa18.51■□□□□ 0.55
SHROOM1-201ENST00000319854 SYTL4Q96C24 671 aaPredicted RBP18.51■□□□□ 0.55
SHROOM1-201ENST00000319854 ZKSCAN1P17029 563 aaPredicted RBP18.51■□□□□ 0.55
SHROOM1-201ENST00000319854 LIMCH1Q9UPQ0 1083 aa18.51■□□□□ 0.55
SHROOM1-201ENST00000319854 SMC3Q9UQE7 1217 aa18.51■□□□□ 0.55
SHROOM1-201ENST00000319854 CCDC171Q6TFL3 1326 aa18.51■□□□□ 0.55
SHROOM1-201ENST00000319854 CREB3L3Q68CJ9 461 aa18.5■□□□□ 0.55
SHROOM1-201ENST00000319854 CYP46A1Q9Y6A2 500 aa18.5■□□□□ 0.55
SHROOM1-201ENST00000319854 VPS37CA5D8V6 355 aaPredicted RBP18.5■□□□□ 0.55
SHROOM1-201ENST00000319854 UTYO14607 1347 aa18.49■□□□□ 0.55
SHROOM1-201ENST00000319854 STRCP1A6NGW2 1772 aa18.49■□□□□ 0.55
SHROOM1-201ENST00000319854 HCLS1P14317 486 aaPredicted RBP18.49■□□□□ 0.55
SHROOM1-201ENST00000319854 TNNI3KQ59H18 835 aa18.49■□□□□ 0.55
SHROOM1-201ENST00000319854 FPGT-TNNI3KV9GXZ4 949 aa18.49■□□□□ 0.55
SHROOM1-201ENST00000319854 FIBPO43427 364 aa18.49■□□□□ 0.55
SHROOM1-201ENST00000319854 PPFIA3O75145 1194 aa18.49■□□□□ 0.55
SHROOM1-201ENST00000319854 TTC14Q96N46 770 aa18.49■□□□□ 0.55
SHROOM1-201ENST00000319854 GTPBP4Q9BZE4 634 aaKnown RBP18.49■□□□□ 0.55
SHROOM1-201ENST00000319854 WDR17Q8IZU2 1322 aa18.49■□□□□ 0.55
SHROOM1-201ENST00000319854 USP42Q9H9J4 1324 aaKnown RBP18.49■□□□□ 0.55
SHROOM1-201ENST00000319854 PHRF1Q9P1Y6 1649 aaKnown RBP18.49■□□□□ 0.55
SHROOM1-201ENST00000319854 PLBD2Q8NHP8 589 aa18.48■□□□□ 0.55
SHROOM1-201ENST00000319854 SPTLC3Q9NUV7 552 aa18.48■□□□□ 0.55
SHROOM1-201ENST00000319854 CNPY2Q9Y2B0 182 aa18.48■□□□□ 0.55
SHROOM1-201ENST00000319854 OVOS2A0A0G2JMS6 1433 aa18.48■□□□□ 0.55
SHROOM1-201ENST00000319854 IL2RBP14784 551 aa18.48■□□□□ 0.55
SHROOM1-201ENST00000319854 U2AF2P26368 475 aaKnown RBP eCLIP18.48■□□□□ 0.55
SHROOM1-201ENST00000319854 FERMT3Q86UX7 667 aa18.48■□□□□ 0.55
SHROOM1-201ENST00000319854 AP5Z1O43299 807 aa18.48■□□□□ 0.55
SHROOM1-201ENST00000319854 INTS4Q96HW7 963 aaKnown RBP18.48■□□□□ 0.55
SHROOM1-201ENST00000319854 SYT1P21579 422 aa18.47■□□□□ 0.55
SHROOM1-201ENST00000319854 LRRC2Q9BYS8 371 aa18.47■□□□□ 0.55
SHROOM1-201ENST00000319854 C5P01031 1676 aa18.47■□□□□ 0.55
SHROOM1-201ENST00000319854 ALS2Q96Q42 1657 aa18.47■□□□□ 0.55
SHROOM1-201ENST00000319854 GJB2P29033 226 aa18.47■□□□□ 0.55
SHROOM1-201ENST00000319854 SYAP1Q96A49 352 aaPredicted RBP18.47■□□□□ 0.55
SHROOM1-201ENST00000319854 PCDH11XQ9BZA7 1347 aa18.47■□□□□ 0.55
SHROOM1-201ENST00000319854 PCDH11YQ9BZA8 1340 aa18.47■□□□□ 0.55
SHROOM1-201ENST00000319854 RFX5P48382 616 aaPredicted RBP18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 LRRC24Q50LG9 513 aa18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 ASAP1Q9ULH1 1129 aa18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 PYCARDQ9ULZ3 195 aa18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 RIOK3O14730 519 aaKnown RBP18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 SLC27A2O14975 620 aa18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 PLCB2Q00722 1185 aa18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 ME3Q16798 604 aa18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 PDCL2Q8N4E4 241 aa18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 TUBGCP6Q96RT7 1819 aa18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 KIF1AQ12756 1690 aa18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 GOLIM4O00461 696 aa18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 GPTP24298 496 aa18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 NECTIN1Q15223 517 aa18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 SYNE4Q8N205 404 aa18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 PUS3Q9BZE2 481 aaKnown RBP18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 CWC25Q9NXE8 425 aaPredicted RBP18.46■□□□□ 0.55
SHROOM1-201ENST00000319854 WDR33Q9C0J8 1336 aaKnown RBP18.46■□□□□ 0.54
SHROOM1-201ENST00000319854 KCNF1Q9H3M0 494 aa18.45■□□□□ 0.54
SHROOM1-201ENST00000319854 SNRKQ9NRH2 765 aa18.45■□□□□ 0.54
SHROOM1-201ENST00000319854 STX6O43752 255 aa18.45■□□□□ 0.54
SHROOM1-201ENST00000319854 UVSSAQ2YD98 709 aa18.45■□□□□ 0.54
SHROOM1-201ENST00000319854 FAM173BQ6P4H8 233 aa18.45■□□□□ 0.54
SHROOM1-201ENST00000319854 COPRSQ9NQ92 184 aa18.45■□□□□ 0.54
SHROOM1-201ENST00000319854 TPCN1Q9ULQ1 816 aa18.45■□□□□ 0.54
SHROOM1-201ENST00000319854 FOSBP53539 338 aa18.44■□□□□ 0.54
SHROOM1-201ENST00000319854 FAM89AQ96GI7 184 aa18.44■□□□□ 0.54
SHROOM1-201ENST00000319854 NAP1L2Q9ULW6 460 aaPredicted RBP18.44■□□□□ 0.54
SHROOM1-201ENST00000319854 KIF20AO95235 890 aa18.44■□□□□ 0.54
SHROOM1-201ENST00000319854 BTG4Q9NY30 223 aa18.44■□□□□ 0.54
SHROOM1-201ENST00000319854 TMOD3Q9NYL9 352 aa18.44■□□□□ 0.54
SHROOM1-201ENST00000319854 TAOK2Q9UL54 1235 aa18.44■□□□□ 0.54
SHROOM1-201ENST00000319854 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.44■□□□□ 0.54
SHROOM1-201ENST00000319854 CAMTA1Q9Y6Y1 1673 aa18.44■□□□□ 0.54
SHROOM1-201ENST00000319854 BLOC1S2Q6QNY1 142 aa18.43■□□□□ 0.54
SHROOM1-201ENST00000319854 N4BP2Q86UW6 1770 aaPredicted RBP18.43■□□□□ 0.54
SHROOM1-201ENST00000319854 DNAJC10Q8IXB1 793 aa18.43■□□□□ 0.54
SHROOM1-201ENST00000319854 MAP4K1Q92918 833 aa18.43■□□□□ 0.54
SHROOM1-201ENST00000319854 RPAP1Q9BWH6 1393 aaPredicted RBP18.42■□□□□ 0.54
SHROOM1-201ENST00000319854 FAM184AQ8NB25 1140 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms