RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 SLIT1O75093 1534 aa16.7■□□□□ 0.26
PABPC1-201ENST00000318607 PRR36Q9H6K5 1346 aa16.7■□□□□ 0.26
PABPC1-201ENST00000318607 FBXO38Q6PIJ6 1188 aa16.69■□□□□ 0.26
PABPC1-201ENST00000318607 SMTNL1A8MU46 457 aa16.69■□□□□ 0.26
PABPC1-201ENST00000318607 URI1O94763 535 aaPredicted RBP16.69■□□□□ 0.26
PABPC1-201ENST00000318607 GYS2P54840 703 aa16.69■□□□□ 0.26
PABPC1-201ENST00000318607 HAND2P61296 217 aa16.69■□□□□ 0.26
PABPC1-201ENST00000318607 PROSER3Q2NL68 480 aa16.69■□□□□ 0.26
PABPC1-201ENST00000318607 FSIP1Q8NA03 581 aa16.69■□□□□ 0.26
PABPC1-201ENST00000318607 TNNT3P45378 269 aaPredicted RBP16.69■□□□□ 0.26
PABPC1-201ENST00000318607 ZCCHC17Q9NP64 241 aaKnown RBP16.69■□□□□ 0.26
PABPC1-201ENST00000318607 CTNNA3Q9UI47 895 aa16.69■□□□□ 0.26
PABPC1-201ENST00000318607 SLC27A2O14975 620 aa16.68■□□□□ 0.26
PABPC1-201ENST00000318607 Q6ZUG5 572 aa16.68■□□□□ 0.26
PABPC1-201ENST00000318607 LRRC59Q96AG4 307 aaKnown RBP16.68■□□□□ 0.26
PABPC1-201ENST00000318607 DNAI1Q9UI46 699 aa16.68■□□□□ 0.26
PABPC1-201ENST00000318607 ADGRB1O14514 1584 aa16.68■□□□□ 0.26
PABPC1-201ENST00000318607 KRT222Q8N1A0 295 aa16.68■□□□□ 0.26
PABPC1-201ENST00000318607 SCAND2PQ9GZW5 306 aaPredicted RBP16.68■□□□□ 0.26
PABPC1-201ENST00000318607 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
PABPC1-201ENST00000318607 KIF20AO95235 890 aa16.67■□□□□ 0.26
PABPC1-201ENST00000318607 APOBRQ0VD83 1088 aa16.67■□□□□ 0.26
PABPC1-201ENST00000318607 NEK11Q8NG66 645 aa16.67■□□□□ 0.26
PABPC1-201ENST00000318607 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
PABPC1-201ENST00000318607 FUCA2Q9BTY2 467 aa16.67■□□□□ 0.26
PABPC1-201ENST00000318607 CCDC171Q6TFL3 1326 aa16.67■□□□□ 0.26
PABPC1-201ENST00000318607 PDCP20941 246 aa16.67■□□□□ 0.26
PABPC1-201ENST00000318607 UTP14CQ5TAP6 766 aaKnown RBP16.67■□□□□ 0.26
PABPC1-201ENST00000318607 RNF20Q5VTR2 975 aa16.67■□□□□ 0.26
PABPC1-201ENST00000318607 TPM3P06753 285 aa16.66■□□□□ 0.26
PABPC1-201ENST00000318607 RIC3Q7Z5B4 369 aa16.66■□□□□ 0.26
PABPC1-201ENST00000318607 MNS1Q8NEH6 495 aa16.66■□□□□ 0.26
PABPC1-201ENST00000318607 KIF18AQ8NI77 898 aa16.66■□□□□ 0.26
PABPC1-201ENST00000318607 MYO5BQ9ULV0 1848 aa16.66■□□□□ 0.26
PABPC1-201ENST00000318607 SEC31AO94979 1220 aaKnown RBP16.66■□□□□ 0.26
PABPC1-201ENST00000318607 SLC39A6Q13433 755 aa16.66■□□□□ 0.26
PABPC1-201ENST00000318607 ARHGAP29Q52LW3 1261 aa16.66■□□□□ 0.26
PABPC1-201ENST00000318607 VPS53Q5VIR6 699 aa16.66■□□□□ 0.26
PABPC1-201ENST00000318607 IFNKQ9P0W0 207 aa16.66■□□□□ 0.26
PABPC1-201ENST00000318607 CD163L1Q9NR16 1453 aa16.66■□□□□ 0.26
PABPC1-201ENST00000318607 CEBPAP49715 358 aaPredicted RBP16.66■□□□□ 0.26
PABPC1-201ENST00000318607 ZSCAN31Q96LW9 406 aaPredicted RBP16.66■□□□□ 0.26
PABPC1-201ENST00000318607 ATP5J2-PTCD1G3V325 749 aa16.65■□□□□ 0.26
PABPC1-201ENST00000318607 PTCD1O75127 700 aaKnown RBP16.65■□□□□ 0.26
PABPC1-201ENST00000318607 PSMA5P28066 241 aa16.65■□□□□ 0.26
PABPC1-201ENST00000318607 LRRC8AQ8IWT6 810 aa16.65■□□□□ 0.26
PABPC1-201ENST00000318607 TOPAZ1Q8N9V7 1692 aa16.65■□□□□ 0.26
PABPC1-201ENST00000318607 SSH3Q8TE77 659 aa16.65■□□□□ 0.26
PABPC1-201ENST00000318607 SH2B1Q9NRF2 756 aaPredicted RBP16.65■□□□□ 0.26
PABPC1-201ENST00000318607 BTBD11A6QL63 1104 aa16.65■□□□□ 0.26
PABPC1-201ENST00000318607 MARCKSP29966 332 aaPredicted RBP16.65■□□□□ 0.26
PABPC1-201ENST00000318607 SNW1Q13573 536 aaKnown RBP16.65■□□□□ 0.26
PABPC1-201ENST00000318607 STAP2Q9UGK3 403 aa16.65■□□□□ 0.26
PABPC1-201ENST00000318607 SNRKQ9NRH2 765 aa16.65■□□□□ 0.26
PABPC1-201ENST00000318607 METP08581 1390 aa16.64■□□□□ 0.25
PABPC1-201ENST00000318607 XRN1Q8IZH2 1706 aaKnown RBP16.64■□□□□ 0.25
PABPC1-201ENST00000318607 GPHNQ9NQX3 736 aaPredicted RBP16.64■□□□□ 0.25
PABPC1-201ENST00000318607 A0A0G2JLW4 131 aa16.64■□□□□ 0.25
PABPC1-201ENST00000318607 RXRAP19793 462 aa16.64■□□□□ 0.25
PABPC1-201ENST00000318607 ANKRD7Q92527 254 aa16.64■□□□□ 0.25
PABPC1-201ENST00000318607 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
PABPC1-201ENST00000318607 NPHP3Q7Z494 1330 aa16.63■□□□□ 0.25
PABPC1-201ENST00000318607 NEXMIFQ5QGS0 1516 aa16.63■□□□□ 0.25
PABPC1-201ENST00000318607 HDGFP51858 240 aaKnown RBP16.63■□□□□ 0.25
PABPC1-201ENST00000318607 TEX35Q5T0J7 233 aa16.63■□□□□ 0.25
PABPC1-201ENST00000318607 ZNF530Q6P9A1 599 aaPredicted RBP16.63■□□□□ 0.25
PABPC1-201ENST00000318607 CCDC82Q8N4S0 544 aa16.63■□□□□ 0.25
PABPC1-201ENST00000318607 NOL10Q9BSC4 688 aaKnown RBP16.63■□□□□ 0.25
PABPC1-201ENST00000318607 DDX19AQ9NUU7 478 aaKnown RBP16.63■□□□□ 0.25
PABPC1-201ENST00000318607 ARHGAP23Q9P227 1491 aa16.63■□□□□ 0.25
PABPC1-201ENST00000318607 SALL3Q9BXA9 1300 aa16.63■□□□□ 0.25
PABPC1-201ENST00000318607 USP28Q96RU2 1077 aa16.63■□□□□ 0.25
PABPC1-201ENST00000318607 CLSTN2Q9H4D0 955 aa16.63■□□□□ 0.25
PABPC1-201ENST00000318607 BICC1Q9H694 974 aaKnown RBP16.63■□□□□ 0.25
PABPC1-201ENST00000318607 ZSWIM6Q9HCJ5 1215 aa16.63■□□□□ 0.25
PABPC1-201ENST00000318607 GTF2E1P29083 439 aaPredicted RBP16.62■□□□□ 0.25
PABPC1-201ENST00000318607 STK38Q15208 465 aa16.62■□□□□ 0.25
PABPC1-201ENST00000318607 TRIM34Q9BYJ4 488 aa16.62■□□□□ 0.25
PABPC1-201ENST00000318607 RNF216Q9NWF9 866 aaPredicted RBP16.62■□□□□ 0.25
PABPC1-201ENST00000318607 ANKRD65E5RJM6 399 aa16.61■□□□□ 0.25
PABPC1-201ENST00000318607 SERPINC1P01008 464 aa16.61■□□□□ 0.25
PABPC1-201ENST00000318607 UBXN4Q92575 508 aa16.61■□□□□ 0.25
PABPC1-201ENST00000318607 NEK1Q96PY6 1258 aa16.61■□□□□ 0.25
PABPC1-201ENST00000318607 FEZ1Q99689 392 aa16.61■□□□□ 0.25
PABPC1-201ENST00000318607 PAXBP1Q9Y5B6 917 aa16.61■□□□□ 0.25
PABPC1-201ENST00000318607 SFPQP23246 707 aaKnown RBP eCLIP16.61■□□□□ 0.25
PABPC1-201ENST00000318607 DDX41Q9UJV9 622 aaKnown RBP16.61■□□□□ 0.25
PABPC1-201ENST00000318607 CFAP100Q494V2 611 aa16.61■□□□□ 0.25
PABPC1-201ENST00000318607 SPECC1Q5M775 1068 aa16.61■□□□□ 0.25
PABPC1-201ENST00000318607 CEP57L1Q8IYX8 460 aa16.61■□□□□ 0.25
PABPC1-201ENST00000318607 TMEM87AQ8NBN3 555 aa16.61■□□□□ 0.25
PABPC1-201ENST00000318607 EVI5LQ96CN4 794 aa16.61■□□□□ 0.25
PABPC1-201ENST00000318607 SETD1BQ9UPS6 1966 aaKnown RBP16.6■□□□□ 0.25
PABPC1-201ENST00000318607 CPLX3Q8WVH0 158 aa16.6■□□□□ 0.25
PABPC1-201ENST00000318607 GOLPH3LQ9H4A5 285 aa16.6■□□□□ 0.25
PABPC1-201ENST00000318607 SLU7O95391 586 aaKnown RBP16.6■□□□□ 0.25
PABPC1-201ENST00000318607 HSP90AB4PQ58FF6 505 aa16.6■□□□□ 0.25
PABPC1-201ENST00000318607 ZNF397Q8NF99 534 aaPredicted RBP16.6■□□□□ 0.25
PABPC1-201ENST00000318607 XPO4Q9C0E2 1151 aaKnown RBP16.6■□□□□ 0.25
PABPC1-201ENST00000318607 PHACTR2O75167 634 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms