RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 KLHL34Q8N239 644 aa16.53■□□□□ 0.24
ATG4C-201ENST00000317868 FSD1Q9BTV5 496 aa16.53■□□□□ 0.24
ATG4C-201ENST00000317868 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
ATG4C-201ENST00000317868 TFCP2Q12800 502 aa16.53■□□□□ 0.24
ATG4C-201ENST00000317868 COL9A3Q14050 684 aaPredicted RBP16.53■□□□□ 0.24
ATG4C-201ENST00000317868 HMG20BQ9P0W2 317 aa16.53■□□□□ 0.24
ATG4C-201ENST00000317868 PALLDQ8WX93 1383 aa16.53■□□□□ 0.24
ATG4C-201ENST00000317868 SMC3Q9UQE7 1217 aa16.52■□□□□ 0.24
ATG4C-201ENST00000317868 MTMR6Q9Y217 621 aa16.52■□□□□ 0.24
ATG4C-201ENST00000317868 TAF5LO75529 589 aa16.52■□□□□ 0.24
ATG4C-201ENST00000317868 TICAM2Q86XR7 235 aa16.52■□□□□ 0.24
ATG4C-201ENST00000317868 TRIM44Q96DX7 344 aaPredicted RBP16.52■□□□□ 0.24
ATG4C-201ENST00000317868 LARP6Q9BRS8 491 aaKnown RBP16.52■□□□□ 0.24
ATG4C-201ENST00000317868 TPCN1Q9ULQ1 816 aa16.52■□□□□ 0.24
ATG4C-201ENST00000317868 A0A087WZG4 1122 aa16.52■□□□□ 0.23
ATG4C-201ENST00000317868 HAUS7Q99871 368 aa16.52■□□□□ 0.23
ATG4C-201ENST00000317868 NWD2Q9ULI1 1742 aa16.52■□□□□ 0.23
ATG4C-201ENST00000317868 PSMA5P28066 241 aa16.51■□□□□ 0.23
ATG4C-201ENST00000317868 GJB2P29033 226 aa16.51■□□□□ 0.23
ATG4C-201ENST00000317868 CCDC83Q8IWF9 413 aa16.51■□□□□ 0.23
ATG4C-201ENST00000317868 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
ATG4C-201ENST00000317868 SYAP1Q96A49 352 aaPredicted RBP16.51■□□□□ 0.23
ATG4C-201ENST00000317868 ANO8Q9HCE9 1232 aaPredicted RBP16.51■□□□□ 0.23
ATG4C-201ENST00000317868 GPR108Q9NPR9 543 aa16.51■□□□□ 0.23
ATG4C-201ENST00000317868 TAF6LQ9Y6J9 622 aa16.51■□□□□ 0.23
ATG4C-201ENST00000317868 LRP6O75581 1613 aa16.51■□□□□ 0.23
ATG4C-201ENST00000317868 RPS6KB1P23443 525 aa16.5■□□□□ 0.23
ATG4C-201ENST00000317868 ATG9AQ7Z3C6 839 aa16.5■□□□□ 0.23
ATG4C-201ENST00000317868 GDPD2Q9HCC8 539 aa16.5■□□□□ 0.23
ATG4C-201ENST00000317868 CNPY2Q9Y2B0 182 aa16.5■□□□□ 0.23
ATG4C-201ENST00000317868 ATP5J2-PTCD1G3V325 749 aa16.5■□□□□ 0.23
ATG4C-201ENST00000317868 PTCD1O75127 700 aaKnown RBP16.5■□□□□ 0.23
ATG4C-201ENST00000317868 TOB2Q14106 344 aaPredicted RBP16.5■□□□□ 0.23
ATG4C-201ENST00000317868 JARID2Q92833 1246 aaPredicted RBP16.5■□□□□ 0.23
ATG4C-201ENST00000317868 PDIA4P13667 645 aaKnown RBP16.49■□□□□ 0.23
ATG4C-201ENST00000317868 RNF20Q5VTR2 975 aa16.49■□□□□ 0.23
ATG4C-201ENST00000317868 EDC3Q96F86 508 aaKnown RBP16.49■□□□□ 0.23
ATG4C-201ENST00000317868 SH3TC1Q8TE82 1336 aa16.49■□□□□ 0.23
ATG4C-201ENST00000317868 ANP32BQ92688 251 aaKnown RBP16.49■□□□□ 0.23
ATG4C-201ENST00000317868 CARD10Q9BWT7 1032 aa16.49■□□□□ 0.23
ATG4C-201ENST00000317868 UBE2HP62256 183 aa16.49■□□□□ 0.23
ATG4C-201ENST00000317868 DBNDD2Q9BQY9 259 aa16.49■□□□□ 0.23
ATG4C-201ENST00000317868 ATP6V1DQ9Y5K8 247 aa16.49■□□□□ 0.23
ATG4C-201ENST00000317868 ANKRD1Q15327 319 aa16.48■□□□□ 0.23
ATG4C-201ENST00000317868 TTLL7Q6ZT98 887 aa16.48■□□□□ 0.23
ATG4C-201ENST00000317868 ZSCAN30Q86W11 494 aa16.48■□□□□ 0.23
ATG4C-201ENST00000317868 AKAP11Q9UKA4 1901 aa16.48■□□□□ 0.23
ATG4C-201ENST00000317868 LMBR1LQ6UX01 489 aa16.48■□□□□ 0.23
ATG4C-201ENST00000317868 NUP98P52948 1817 aa16.48■□□□□ 0.23
ATG4C-201ENST00000317868 PHF14O94880 888 aa16.47■□□□□ 0.23
ATG4C-201ENST00000317868 ATG3Q9NT62 314 aa16.47■□□□□ 0.23
ATG4C-201ENST00000317868 CWC25Q9NXE8 425 aaPredicted RBP16.47■□□□□ 0.23
ATG4C-201ENST00000317868 BLOC1S2Q6QNY1 142 aa16.47■□□□□ 0.23
ATG4C-201ENST00000317868 CCDC191Q8NCU4 936 aa16.47■□□□□ 0.23
ATG4C-201ENST00000317868 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
ATG4C-201ENST00000317868 ARAP2Q8WZ64 1704 aa16.47■□□□□ 0.23
ATG4C-201ENST00000317868 CCDC183Q5T5S1 534 aa16.46■□□□□ 0.23
ATG4C-201ENST00000317868 PRDM11Q9NQV5 511 aa16.46■□□□□ 0.23
ATG4C-201ENST00000317868 IL2RBP14784 551 aa16.46■□□□□ 0.23
ATG4C-201ENST00000317868 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.46■□□□□ 0.23
ATG4C-201ENST00000317868 KRT32Q14532 448 aa16.46■□□□□ 0.22
ATG4C-201ENST00000317868 KBTBD3Q8NAB2 608 aa16.46■□□□□ 0.22
ATG4C-201ENST00000317868 COL14A1Q05707 1796 aaKnown RBP16.45■□□□□ 0.22
ATG4C-201ENST00000317868 CIAO1O76071 339 aa16.45■□□□□ 0.22
ATG4C-201ENST00000317868 TOM1L2Q6ZVM7 507 aa16.45■□□□□ 0.22
ATG4C-201ENST00000317868 NECAB1Q8N987 351 aa16.45■□□□□ 0.22
ATG4C-201ENST00000317868 NOL7Q9UMY1 257 aaKnown RBP16.45■□□□□ 0.22
ATG4C-201ENST00000317868 KCNJ4P48050 445 aa16.45■□□□□ 0.22
ATG4C-201ENST00000317868 DDX54Q8TDD1 881 aaKnown RBP16.45■□□□□ 0.22
ATG4C-201ENST00000317868 FUCA2Q9BTY2 467 aa16.45■□□□□ 0.22
ATG4C-201ENST00000317868 ISCA1Q9BUE6 129 aa16.45■□□□□ 0.22
ATG4C-201ENST00000317868 FOXD4L6Q3SYB3 417 aaPredicted RBP16.44■□□□□ 0.22
ATG4C-201ENST00000317868 MCMDC2Q4G0Z9 681 aa16.44■□□□□ 0.22
ATG4C-201ENST00000317868 FOXD4L3Q6VB84 417 aaPredicted RBP16.44■□□□□ 0.22
ATG4C-201ENST00000317868 A1BGP04217 495 aa16.44■□□□□ 0.22
ATG4C-201ENST00000317868 IL15P40933 162 aaPredicted RBP16.44■□□□□ 0.22
ATG4C-201ENST00000317868 HSPA2P54652 639 aa16.44■□□□□ 0.22
ATG4C-201ENST00000317868 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.44■□□□□ 0.22
ATG4C-201ENST00000317868 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
ATG4C-201ENST00000317868 COL22A1Q8NFW1 1626 aaPredicted RBP16.44■□□□□ 0.22
ATG4C-201ENST00000317868 ELP1O95163 1332 aa16.43■□□□□ 0.22
ATG4C-201ENST00000317868 LRP5O75197 1615 aa16.43■□□□□ 0.22
ATG4C-201ENST00000317868 LETM1O95202 739 aaPredicted RBP16.43■□□□□ 0.22
ATG4C-201ENST00000317868 CHGBP05060 677 aa16.43■□□□□ 0.22
ATG4C-201ENST00000317868 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
ATG4C-201ENST00000317868 MYO5AQ9Y4I1 1855 aaKnown RBP16.43■□□□□ 0.22
ATG4C-201ENST00000317868 DISP2A7MBM2 1401 aa16.43■□□□□ 0.22
ATG4C-201ENST00000317868 DNM1Q05193 864 aaKnown RBP16.43■□□□□ 0.22
ATG4C-201ENST00000317868 FAM184AQ8NB25 1140 aa16.43■□□□□ 0.22
ATG4C-201ENST00000317868 NDUFB9Q9Y6M9 179 aa16.43■□□□□ 0.22
ATG4C-201ENST00000317868 CYP21A2P08686 494 aa16.42■□□□□ 0.22
ATG4C-201ENST00000317868 CSPP1Q1MSJ5 1256 aa16.42■□□□□ 0.22
ATG4C-201ENST00000317868 UVSSAQ2YD98 709 aa16.42■□□□□ 0.22
ATG4C-201ENST00000317868 COL16A1Q07092 1604 aaPredicted RBP16.42■□□□□ 0.22
ATG4C-201ENST00000317868 SEC62Q99442 399 aaKnown RBP16.42■□□□□ 0.22
ATG4C-201ENST00000317868 HELLSQ9NRZ9 838 aa16.42■□□□□ 0.22
ATG4C-201ENST00000317868 CICQ96RK0 1608 aaPredicted RBP16.42■□□□□ 0.22
ATG4C-201ENST00000317868 EYA2O00167 538 aa16.42■□□□□ 0.22
ATG4C-201ENST00000317868 TRIM28Q13263 835 aaKnown RBP16.42■□□□□ 0.22
ATG4C-201ENST00000317868 CDC37L1Q7L3B6 337 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms