RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 SYT1P21579 422 aa24.75■■□□□ 1.55
TTC39C-202ENST00000317571 ATG9AQ7Z3C6 839 aa24.75■■□□□ 1.55
TTC39C-202ENST00000317571 ME3Q16798 604 aa24.74■■□□□ 1.55
TTC39C-202ENST00000317571 ZNF609O15014 1411 aa24.74■■□□□ 1.55
TTC39C-202ENST00000317571 TPCN1Q9ULQ1 816 aa24.73■■□□□ 1.55
TTC39C-202ENST00000317571 TAF5LO75529 589 aa24.73■■□□□ 1.55
TTC39C-202ENST00000317571 TCEANC2Q96MN5 208 aa24.73■■□□□ 1.55
TTC39C-202ENST00000317571 CWC25Q9NXE8 425 aaPredicted RBP24.73■■□□□ 1.55
TTC39C-202ENST00000317571 SYCE3A1L190 88 aa24.72■■□□□ 1.55
TTC39C-202ENST00000317571 ZKSCAN1P17029 563 aaPredicted RBP24.72■■□□□ 1.55
TTC39C-202ENST00000317571 KCNJ4P48050 445 aa24.72■■□□□ 1.55
TTC39C-202ENST00000317571 CHMP3Q9Y3E7 222 aa24.72■■□□□ 1.55
TTC39C-202ENST00000317571 STX6O43752 255 aa24.72■■□□□ 1.55
TTC39C-202ENST00000317571 ZSCAN22P10073 491 aaPredicted RBP24.72■■□□□ 1.55
TTC39C-202ENST00000317571 USP48Q86UV5 1035 aa24.72■■□□□ 1.55
TTC39C-202ENST00000317571 NECAB1Q8N987 351 aa24.72■■□□□ 1.55
TTC39C-202ENST00000317571 SEC62Q99442 399 aaKnown RBP24.72■■□□□ 1.55
TTC39C-202ENST00000317571 DNAJC2Q99543 621 aaKnown RBP24.71■■□□□ 1.55
TTC39C-202ENST00000317571 SMC3Q9UQE7 1217 aa24.71■■□□□ 1.55
TTC39C-202ENST00000317571 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.71■■□□□ 1.55
TTC39C-202ENST00000317571 NHSL1Q5SYE7 1610 aa24.71■■□□□ 1.55
TTC39C-202ENST00000317571 MBD3O95983 291 aa24.71■■□□□ 1.55
TTC39C-202ENST00000317571 CCDC9Q9Y3X0 531 aaKnown RBP24.71■■□□□ 1.55
TTC39C-202ENST00000317571 GJB2P29033 226 aa24.7■■□□□ 1.54
TTC39C-202ENST00000317571 CCDC129Q6ZRS4 1044 aa24.7■■□□□ 1.54
TTC39C-202ENST00000317571 HAUS7Q99871 368 aa24.7■■□□□ 1.54
TTC39C-202ENST00000317571 CNPY2Q9Y2B0 182 aa24.7■■□□□ 1.54
TTC39C-202ENST00000317571 CLCN1P35523 988 aa24.7■■□□□ 1.54
TTC39C-202ENST00000317571 ZNF594Q96JF6 807 aaPredicted RBP24.7■■□□□ 1.54
TTC39C-202ENST00000317571 DDX46Q7L014 1031 aaKnown RBP24.69■■□□□ 1.54
TTC39C-202ENST00000317571 PPP1R9BQ96SB3 815 aa24.69■■□□□ 1.54
TTC39C-202ENST00000317571 SLFNL1Q499Z3 407 aa24.69■■□□□ 1.54
TTC39C-202ENST00000317571 LRRC24Q50LG9 513 aa24.69■■□□□ 1.54
TTC39C-202ENST00000317571 KDM4FA0A1W2PPD8 638 aa24.68■■□□□ 1.54
TTC39C-202ENST00000317571 LRSAM1Q6UWE0 723 aa24.68■■□□□ 1.54
TTC39C-202ENST00000317571 F13A1P00488 732 aa24.67■■□□□ 1.54
TTC39C-202ENST00000317571 USPL1Q5W0Q7 1092 aa24.67■■□□□ 1.54
TTC39C-202ENST00000317571 ZSCAN31Q96LW9 406 aaPredicted RBP24.67■■□□□ 1.54
TTC39C-202ENST00000317571 SH2B1Q9NRF2 756 aaPredicted RBP24.67■■□□□ 1.54
TTC39C-202ENST00000317571 TMEM87AQ8NBN3 555 aa24.67■■□□□ 1.54
TTC39C-202ENST00000317571 CCDC191Q8NCU4 936 aa24.67■■□□□ 1.54
TTC39C-202ENST00000317571 MTMR6Q9Y217 621 aa24.67■■□□□ 1.54
TTC39C-202ENST00000317571 EVA1CP58658 441 aa24.66■■□□□ 1.54
TTC39C-202ENST00000317571 TIMM10P62072 90 aa24.66■■□□□ 1.54
TTC39C-202ENST00000317571 TOB2Q14106 344 aaPredicted RBP24.66■■□□□ 1.54
TTC39C-202ENST00000317571 RFX7Q2KHR2 1363 aa24.66■■□□□ 1.54
TTC39C-202ENST00000317571 RPS6KB1P23443 525 aa24.66■■□□□ 1.54
TTC39C-202ENST00000317571 ASAP1Q9ULH1 1129 aa24.66■■□□□ 1.54
TTC39C-202ENST00000317571 CCDC173Q0VFZ6 552 aa24.65■■□□□ 1.54
TTC39C-202ENST00000317571 ISCA1Q9BUE6 129 aa24.65■■□□□ 1.54
TTC39C-202ENST00000317571 PUS3Q9BZE2 481 aaKnown RBP24.65■■□□□ 1.54
TTC39C-202ENST00000317571 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.65■■□□□ 1.54
TTC39C-202ENST00000317571 TSGA10IPQ3SY00 556 aa24.65■■□□□ 1.54
TTC39C-202ENST00000317571 BLOC1S2Q6QNY1 142 aa24.64■■□□□ 1.54
TTC39C-202ENST00000317571 PSMA5P28066 241 aa24.64■■□□□ 1.53
TTC39C-202ENST00000317571 PIGBQ92521 554 aa24.64■■□□□ 1.53
TTC39C-202ENST00000317571 RNF20Q5VTR2 975 aa24.63■■□□□ 1.53
TTC39C-202ENST00000317571 DNAJC10Q8IXB1 793 aa24.63■■□□□ 1.53
TTC39C-202ENST00000317571 NEUROD6Q96NK8 337 aa24.63■■□□□ 1.53
TTC39C-202ENST00000317571 TMOD3Q9NYL9 352 aa24.63■■□□□ 1.53
TTC39C-202ENST00000317571 KBTBD3Q8NAB2 608 aa24.63■■□□□ 1.53
TTC39C-202ENST00000317571 ITGB4P16144 1822 aa24.63■■□□□ 1.53
TTC39C-202ENST00000317571 ESPNB1AK53 854 aa24.62■■□□□ 1.53
TTC39C-202ENST00000317571 EYA2O00167 538 aa24.62■■□□□ 1.53
TTC39C-202ENST00000317571 HMG20BQ9P0W2 317 aa24.62■■□□□ 1.53
TTC39C-202ENST00000317571 ZNF330Q9Y3S2 320 aaPredicted RBP24.62■■□□□ 1.53
TTC39C-202ENST00000317571 IL15P40933 162 aaPredicted RBP24.61■■□□□ 1.53
TTC39C-202ENST00000317571 ALDH8A1Q9H2A2 487 aaPredicted RBP24.61■■□□□ 1.53
TTC39C-202ENST00000317571 GPR108Q9NPR9 543 aa24.61■■□□□ 1.53
TTC39C-202ENST00000317571 PALLDQ8WX93 1383 aa24.61■■□□□ 1.53
TTC39C-202ENST00000317571 GOLIM4O00461 696 aa24.61■■□□□ 1.53
TTC39C-202ENST00000317571 CYP21A2P08686 494 aa24.61■■□□□ 1.53
TTC39C-202ENST00000317571 TCIRG1Q13488 830 aa24.6■■□□□ 1.53
TTC39C-202ENST00000317571 MCMDC2Q4G0Z9 681 aa24.6■■□□□ 1.53
TTC39C-202ENST00000317571 TRIM44Q96DX7 344 aaPredicted RBP24.6■■□□□ 1.53
TTC39C-202ENST00000317571 ATG3Q9NT62 314 aa24.6■■□□□ 1.53
TTC39C-202ENST00000317571 DNM1Q05193 864 aaKnown RBP24.6■■□□□ 1.53
TTC39C-202ENST00000317571 BTG4Q9NY30 223 aa24.6■■□□□ 1.53
TTC39C-202ENST00000317571 FIBPO43427 364 aa24.59■■□□□ 1.53
TTC39C-202ENST00000317571 PAG1Q9NWQ8 432 aa24.59■■□□□ 1.53
TTC39C-202ENST00000317571 SH3TC1Q8TE82 1336 aa24.59■■□□□ 1.53
TTC39C-202ENST00000317571 A0A1B0GUL7 405 aa24.59■■□□□ 1.53
TTC39C-202ENST00000317571 STOX1Q6ZVD7 989 aa24.59■■□□□ 1.53
TTC39C-202ENST00000317571 LAMA4Q16363 1823 aa24.58■■□□□ 1.53
TTC39C-202ENST00000317571 TPRNQ4KMQ1 711 aa24.58■■□□□ 1.53
TTC39C-202ENST00000317571 PDLIM2Q96JY6 352 aa24.58■■□□□ 1.53
TTC39C-202ENST00000317571 A0A0G2JLW4 131 aa24.57■■□□□ 1.52
TTC39C-202ENST00000317571 VPS37CA5D8V6 355 aaPredicted RBP24.57■■□□□ 1.52
TTC39C-202ENST00000317571 CCDC85AQ96PX6 553 aaPredicted RBP24.57■■□□□ 1.52
TTC39C-202ENST00000317571 SLC4A9Q96Q91 983 aa24.57■■□□□ 1.52
TTC39C-202ENST00000317571 DISP2A7MBM2 1401 aa24.57■■□□□ 1.52
TTC39C-202ENST00000317571 CIAO1O76071 339 aa24.57■■□□□ 1.52
TTC39C-202ENST00000317571 CDC37L1Q7L3B6 337 aa24.57■■□□□ 1.52
TTC39C-202ENST00000317571 SYNE4Q8N205 404 aa24.57■■□□□ 1.52
TTC39C-202ENST00000317571 RNF214Q8ND24 703 aa24.57■■□□□ 1.52
TTC39C-202ENST00000317571 FAM89AQ96GI7 184 aa24.57■■□□□ 1.52
TTC39C-202ENST00000317571 STK3Q13188 491 aa24.56■■□□□ 1.52
TTC39C-202ENST00000317571 NEK1Q96PY6 1258 aa24.56■■□□□ 1.52
TTC39C-202ENST00000317571 U3KPZ7 1027 aaPredicted RBP24.55■■□□□ 1.52
TTC39C-202ENST00000317571 ANKRD1Q15327 319 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms