RNA–Protein interactions for RNA: ENST00000317419.7

RABGAP1-201, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 2,186 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-201ENST00000317419 CEP85Q6P2H3 762 aa23.68■■□□□ 1.38
RABGAP1-201ENST00000317419 ATP8B2P98198 1209 aa23.67■■□□□ 1.38
RABGAP1-201ENST00000317419 LMBR1LQ6UX01 489 aa23.67■■□□□ 1.38
RABGAP1-201ENST00000317419 RPAP2Q8IXW5 612 aaPredicted RBP23.67■■□□□ 1.38
RABGAP1-201ENST00000317419 PCDHB15Q9Y5E8 787 aa23.67■■□□□ 1.38
RABGAP1-201ENST00000317419 PDE6BP35913 854 aa23.67■■□□□ 1.38
RABGAP1-201ENST00000317419 PDZRN3Q9UPQ7 1066 aa23.66■■□□□ 1.38
RABGAP1-201ENST00000317419 SIRT2Q8IXJ6 389 aa23.65■■□□□ 1.38
RABGAP1-201ENST00000317419 KIAA1551Q9HCM1 1747 aa23.65■■□□□ 1.38
RABGAP1-201ENST00000317419 HOXA10P31260 410 aaPredicted RBP23.64■■□□□ 1.38
RABGAP1-201ENST00000317419 POLA2Q14181 598 aa23.64■■□□□ 1.38
RABGAP1-201ENST00000317419 CCDC152Q4G0S7 254 aa23.64■■□□□ 1.38
RABGAP1-201ENST00000317419 COL11A2P13942 1736 aaPredicted RBP23.64■■□□□ 1.37
RABGAP1-201ENST00000317419 RFX5P48382 616 aaPredicted RBP23.64■■□□□ 1.37
RABGAP1-201ENST00000317419 SSH3Q8TE77 659 aa23.64■■□□□ 1.37
RABGAP1-201ENST00000317419 CD2APQ9Y5K6 639 aa23.64■■□□□ 1.37
RABGAP1-201ENST00000317419 GREM2Q9H772 168 aa23.63■■□□□ 1.37
RABGAP1-201ENST00000317419 PNMA6EA0A0J9YXQ4 647 aa23.62■■□□□ 1.37
RABGAP1-201ENST00000317419 SRGNP10124 158 aa23.62■■□□□ 1.37
RABGAP1-201ENST00000317419 LRP5O75197 1615 aa23.62■■□□□ 1.37
RABGAP1-201ENST00000317419 FAM161AQ3B820 660 aa23.62■■□□□ 1.37
RABGAP1-201ENST00000317419 TGFB2P61812 414 aa23.61■■□□□ 1.37
RABGAP1-201ENST00000317419 DLEC1Q9Y238 1755 aa23.61■■□□□ 1.37
RABGAP1-201ENST00000317419 COL4A1P02462 1669 aa23.6■■□□□ 1.37
RABGAP1-201ENST00000317419 SRGAP3O43295 1099 aa23.59■■□□□ 1.37
RABGAP1-201ENST00000317419 NPR1P16066 1061 aa23.59■■□□□ 1.37
RABGAP1-201ENST00000317419 ITGA6P23229 1130 aa23.59■■□□□ 1.37
RABGAP1-201ENST00000317419 CRAMP1Q96RY5 1269 aa23.59■■□□□ 1.37
RABGAP1-201ENST00000317419 C2CD5Q86YS7 1000 aa23.59■■□□□ 1.37
RABGAP1-201ENST00000317419 KCNA3P22001 575 aa23.58■■□□□ 1.37
RABGAP1-201ENST00000317419 IFIT5Q13325 482 aaKnown RBP23.58■■□□□ 1.37
RABGAP1-201ENST00000317419 HDAC1Q13547 482 aaPredicted RBP23.58■■□□□ 1.37
RABGAP1-201ENST00000317419 STYK1Q6J9G0 422 aa23.58■■□□□ 1.37
RABGAP1-201ENST00000317419 MASTLQ96GX5 879 aa23.58■■□□□ 1.37
RABGAP1-201ENST00000317419 CCDC85AQ96PX6 553 aaPredicted RBP23.58■■□□□ 1.37
RABGAP1-201ENST00000317419 SEC31BQ9NQW1 1179 aa23.58■■□□□ 1.37
RABGAP1-201ENST00000317419 H0YIN7 160 aa23.58■■□□□ 1.36
RABGAP1-201ENST00000317419 PTPN12Q05209 780 aaKnown RBP23.58■■□□□ 1.36
RABGAP1-201ENST00000317419 COPRSQ9NQ92 184 aa23.58■■□□□ 1.36
RABGAP1-201ENST00000317419 ANKRD18BA2A2Z9 1011 aa23.57■■□□□ 1.36
RABGAP1-201ENST00000317419 CCDC57Q2TAC2 916 aa23.57■■□□□ 1.36
RABGAP1-201ENST00000317419 RPGRQ92834 1020 aaKnown RBP23.57■■□□□ 1.36
RABGAP1-201ENST00000317419 RBM17Q96I25 401 aaKnown RBP23.57■■□□□ 1.36
RABGAP1-201ENST00000317419 DDX46Q7L014 1031 aaKnown RBP23.57■■□□□ 1.36
RABGAP1-201ENST00000317419 CHMP3Q9Y3E7 222 aa23.57■■□□□ 1.36
RABGAP1-201ENST00000317419 HMMRO75330 724 aa23.56■■□□□ 1.36
RABGAP1-201ENST00000317419 CHRNA5P30532 468 aa23.56■■□□□ 1.36
RABGAP1-201ENST00000317419 GRAPQ13588 217 aa23.55■■□□□ 1.36
RABGAP1-201ENST00000317419 GRAPLQ8TC17 118 aaPredicted RBP23.55■■□□□ 1.36
RABGAP1-201ENST00000317419 NOP58Q9Y2X3 529 aaKnown RBP23.55■■□□□ 1.36
RABGAP1-201ENST00000317419 DPEP1P16444 411 aa23.55■■□□□ 1.36
RABGAP1-201ENST00000317419 CDC5LQ99459 802 aaKnown RBP23.55■■□□□ 1.36
RABGAP1-201ENST00000317419 CELF1Q92879 486 aaKnown RBP23.54■■□□□ 1.36
RABGAP1-201ENST00000317419 FBXO3Q9UK99 471 aa23.54■■□□□ 1.36
RABGAP1-201ENST00000317419 ALDH1B1P30837 517 aa23.53■■□□□ 1.36
RABGAP1-201ENST00000317419 RPS8P62241 208 aaKnown RBP23.53■■□□□ 1.36
RABGAP1-201ENST00000317419 TAF1P21675 1872 aa23.53■■□□□ 1.36
RABGAP1-201ENST00000317419 ZNF594Q96JF6 807 aaPredicted RBP23.52■■□□□ 1.36
RABGAP1-201ENST00000317419 A0A0G2JLW4 131 aa23.52■■□□□ 1.36
RABGAP1-201ENST00000317419 IGHDP01880 384 aa23.52■■□□□ 1.36
RABGAP1-201ENST00000317419 BRCA1P38398 1863 aaKnown RBP23.52■■□□□ 1.36
RABGAP1-201ENST00000317419 KLHDC4Q8TBB5 520 aa23.52■■□□□ 1.36
RABGAP1-201ENST00000317419 DCTPP1Q9H773 170 aa23.52■■□□□ 1.36
RABGAP1-201ENST00000317419 PA2G4Q9UQ80 394 aaKnown RBP23.52■■□□□ 1.36
RABGAP1-201ENST00000317419 BBOX1O75936 387 aa23.51■■□□□ 1.35
RABGAP1-201ENST00000317419 CIAO1O76071 339 aa23.51■■□□□ 1.35
RABGAP1-201ENST00000317419 ANKRD18AQ8IVF6 992 aa23.51■■□□□ 1.35
RABGAP1-201ENST00000317419 CNKSR1Q969H4 720 aa23.51■■□□□ 1.35
RABGAP1-201ENST00000317419 FHDC1Q9C0D6 1143 aaPredicted RBP23.51■■□□□ 1.35
RABGAP1-201ENST00000317419 RWDD1Q9H446 243 aaPredicted RBP23.51■■□□□ 1.35
RABGAP1-201ENST00000317419 BSDC1Q9NW68 430 aaPredicted RBP23.51■■□□□ 1.35
RABGAP1-201ENST00000317419 PPP4R2Q9NY27 417 aa23.51■■□□□ 1.35
RABGAP1-201ENST00000317419 RIPOR2Q9Y4F9 1068 aa23.5■■□□□ 1.35
RABGAP1-201ENST00000317419 LRRC37AA6NMS7 1700 aa23.5■■□□□ 1.35
RABGAP1-201ENST00000317419 IGHMBP2P38935 993 aaKnown RBP23.5■■□□□ 1.35
RABGAP1-201ENST00000317419 ATG9AQ7Z3C6 839 aa23.5■■□□□ 1.35
RABGAP1-201ENST00000317419 TMC4Q7Z404 712 aa23.5■■□□□ 1.35
RABGAP1-201ENST00000317419 NLGN2Q8NFZ4 835 aa23.5■■□□□ 1.35
RABGAP1-201ENST00000317419 ZNF622Q969S3 477 aaKnown RBP eCLIP23.5■■□□□ 1.352e-6■■■□□ 17.4
RABGAP1-201ENST00000317419 EYA2O00167 538 aa23.49■■□□□ 1.35
RABGAP1-201ENST00000317419 PUS3Q9BZE2 481 aaKnown RBP23.49■■□□□ 1.35
RABGAP1-201ENST00000317419 TAF7LQ5H9L4 462 aa23.48■■□□□ 1.35
RABGAP1-201ENST00000317419 PPP1R1BQ9UD71 204 aaPredicted RBP23.48■■□□□ 1.35
RABGAP1-201ENST00000317419 LDHAL6AQ6ZMR3 332 aa23.48■■□□□ 1.35
RABGAP1-201ENST00000317419 C7orf43Q8WVR3 580 aa23.48■■□□□ 1.35
RABGAP1-201ENST00000317419 SYT17Q9BSW7 474 aa23.48■■□□□ 1.35
RABGAP1-201ENST00000317419 SPEF2Q9C093 1822 aa23.47■■□□□ 1.35
RABGAP1-201ENST00000317419 SURF6O75683 361 aaKnown RBP23.47■■□□□ 1.35
RABGAP1-201ENST00000317419 LRRC24Q50LG9 513 aa23.47■■□□□ 1.35
RABGAP1-201ENST00000317419 SLX4Q8IY92 1834 aa23.47■■□□□ 1.35
RABGAP1-201ENST00000317419 PRPF40BQ6NWY9 871 aaKnown RBP23.47■■□□□ 1.35
RABGAP1-201ENST00000317419 SMC5Q8IY18 1101 aa23.47■■□□□ 1.35
RABGAP1-201ENST00000317419 TTLL6Q8N841 843 aa23.47■■□□□ 1.35
RABGAP1-201ENST00000317419 MPHOSPH8Q99549 860 aa23.47■■□□□ 1.35
RABGAP1-201ENST00000317419 PIM2Q9P1W9 311 aa23.47■■□□□ 1.35
RABGAP1-201ENST00000317419 KDM2BQ8NHM5 1336 aa23.46■■□□□ 1.35
RABGAP1-201ENST00000317419 PPEF1O14829 653 aaPredicted RBP23.46■■□□□ 1.35
RABGAP1-201ENST00000317419 IL15P40933 162 aaPredicted RBP23.46■■□□□ 1.35
RABGAP1-201ENST00000317419 SP8Q8IXZ3 490 aa23.46■■□□□ 1.35
RABGAP1-201ENST00000317419 KLHL34Q8N239 644 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms