RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 SMIM5Q71RC9 77 aa11.79□□□□□ -0.52
GPHN-201ENST00000315266 NECAB1Q8N987 351 aa11.79□□□□□ -0.52
GPHN-201ENST00000315266 ECHDC1Q9NTX5 307 aa11.79□□□□□ -0.52
GPHN-201ENST00000315266 THRAP3Q9Y2W1 955 aaKnown RBP11.79□□□□□ -0.52
GPHN-201ENST00000315266 TTLL7Q6ZT98 887 aa11.79□□□□□ -0.52
GPHN-201ENST00000315266 CHAMP1Q96JM3 812 aa11.79□□□□□ -0.52
GPHN-201ENST00000315266 NOL10Q9BSC4 688 aaKnown RBP11.79□□□□□ -0.52
GPHN-201ENST00000315266 ANKIB1Q9P2G1 1089 aa11.79□□□□□ -0.52
GPHN-201ENST00000315266 NIP7Q9Y221 180 aaKnown RBP eCLIP11.79□□□□□ -0.52
GPHN-201ENST00000315266 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
GPHN-201ENST00000315266 MARCH6O60337 910 aa11.79□□□□□ -0.52
GPHN-201ENST00000315266 KLHL40Q2TBA0 621 aa11.79□□□□□ -0.52
GPHN-201ENST00000315266 ASAP1Q9ULH1 1129 aa11.79□□□□□ -0.52
GPHN-201ENST00000315266 ABCC4O15439 1325 aa11.79□□□□□ -0.52
GPHN-201ENST00000315266 RBM5P52756 815 aaKnown RBP eCLIP11.79□□□□□ -0.52
GPHN-201ENST00000315266 UNC5CLQ8IV45 518 aa11.79□□□□□ -0.52
GPHN-201ENST00000315266 TSPY26PQ9H489 355 aa11.79□□□□□ -0.52
GPHN-201ENST00000315266 RAB11FIP3O75154 756 aa11.78□□□□□ -0.52
GPHN-201ENST00000315266 MBD3O95983 291 aa11.78□□□□□ -0.52
GPHN-201ENST00000315266 IGHMBP2P38935 993 aaKnown RBP11.78□□□□□ -0.52
GPHN-201ENST00000315266 ATP8B2P98198 1209 aa11.78□□□□□ -0.52
GPHN-201ENST00000315266 COL5A2P05997 1499 aaPredicted RBP11.78□□□□□ -0.52
GPHN-201ENST00000315266 TRPM3Q9HCF6 1732 aaPredicted RBP11.78□□□□□ -0.52
GPHN-201ENST00000315266 ZSCAN23Q3MJ62 389 aa11.78□□□□□ -0.52
GPHN-201ENST00000315266 TDO2P48775 406 aa11.78□□□□□ -0.52
GPHN-201ENST00000315266 LRRFIP1Q32MZ4 808 aaKnown RBP11.78□□□□□ -0.52
GPHN-201ENST00000315266 PDRG1Q9NUG6 133 aa11.78□□□□□ -0.52
GPHN-201ENST00000315266 MEGF6O75095 1541 aa11.78□□□□□ -0.52
GPHN-201ENST00000315266 DZIP3Q86Y13 1208 aaKnown RBP11.77□□□□□ -0.52
GPHN-201ENST00000315266 LINS1Q8NG48 757 aa11.77□□□□□ -0.52
GPHN-201ENST00000315266 DCTPP1Q9H773 170 aa11.77□□□□□ -0.52
GPHN-201ENST00000315266 TPM2P07951 284 aa11.77□□□□□ -0.53
GPHN-201ENST00000315266 TFCP2Q12800 502 aa11.77□□□□□ -0.53
GPHN-201ENST00000315266 CPLX2Q6PUV4 134 aaKnown RBP11.77□□□□□ -0.53
GPHN-201ENST00000315266 LARP1BQ659C4 914 aaKnown RBP11.77□□□□□ -0.53
GPHN-201ENST00000315266 CCDC39Q9UFE4 941 aa11.77□□□□□ -0.53
GPHN-201ENST00000315266 ERICH2A1L162 156 aa11.76□□□□□ -0.53
GPHN-201ENST00000315266 USP44Q9H0E7 712 aa11.76□□□□□ -0.53
GPHN-201ENST00000315266 ALS2Q96Q42 1657 aa11.76□□□□□ -0.53
GPHN-201ENST00000315266 TFIP11Q9UBB9 837 aaKnown RBP11.76□□□□□ -0.53
GPHN-201ENST00000315266 ROBO1Q9Y6N7 1651 aa11.76□□□□□ -0.53
GPHN-201ENST00000315266 PKP1Q13835 747 aa11.76□□□□□ -0.53
GPHN-201ENST00000315266 CCDC129Q6ZRS4 1044 aa11.76□□□□□ -0.53
GPHN-201ENST00000315266 SUCLG2Q96I99 432 aa11.76□□□□□ -0.53
GPHN-201ENST00000315266 OVOS2A0A0G2JMS6 1433 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 SPATA31A6Q5VVP1 1343 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 C6orf229H3BNL8 230 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 AIDAQ96BJ3 306 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 CAMTA1Q9Y6Y1 1673 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 DLG5Q8TDM6 1919 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 F8W031 263 aaPredicted RBP11.75□□□□□ -0.53
GPHN-201ENST00000315266 TAF5LO75529 589 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 SPC24Q8NBT2 197 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 SMARCC1Q92922 1105 aaPredicted RBP11.75□□□□□ -0.53
GPHN-201ENST00000315266 ATP6V1DQ9Y5K8 247 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 ANKRD18BA2A2Z9 1011 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 RRP9O43818 475 aaKnown RBP11.75□□□□□ -0.53
GPHN-201ENST00000315266 ALDH1L1O75891 902 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 GSPT1P15170 499 aaKnown RBP11.75□□□□□ -0.53
GPHN-201ENST00000315266 IKQ13123 557 aaPredicted RBP11.75□□□□□ -0.53
GPHN-201ENST00000315266 TRIM29Q14134 588 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 TMX3Q96JJ7 454 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 USP26Q9BXU7 913 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 UQCRHLA0A096LP55 91 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 UQCRHP07919 91 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 MCM2P49736 904 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 CSPP1Q1MSJ5 1256 aa11.75□□□□□ -0.53
GPHN-201ENST00000315266 NBPF5PQ86XG9 351 aaPredicted RBP11.75□□□□□ -0.53
GPHN-201ENST00000315266 PSMA5P28066 241 aa11.74□□□□□ -0.53
GPHN-201ENST00000315266 RFC4P35249 363 aa11.74□□□□□ -0.53
GPHN-201ENST00000315266 PDE4CQ08493 712 aa11.74□□□□□ -0.53
GPHN-201ENST00000315266 TRIM34Q9BYJ4 488 aa11.74□□□□□ -0.53
GPHN-201ENST00000315266 FSD2A1L4K1 749 aa11.74□□□□□ -0.53
GPHN-201ENST00000315266 ZSCAN29Q8IWY8 852 aaPredicted RBP11.74□□□□□ -0.53
GPHN-201ENST00000315266 DBNDD2Q9BQY9 259 aa11.74□□□□□ -0.53
GPHN-201ENST00000315266 ABCC6O95255 1503 aa11.73□□□□□ -0.53
GPHN-201ENST00000315266 USP54Q70EL1 1684 aa11.73□□□□□ -0.53
GPHN-201ENST00000315266 HSPA1LP34931 641 aa11.73□□□□□ -0.53
GPHN-201ENST00000315266 AK7Q96M32 723 aa11.73□□□□□ -0.53
GPHN-201ENST00000315266 KIF3AQ9Y496 699 aa11.73□□□□□ -0.53
GPHN-201ENST00000315266 PLEKHG2Q9H7P9 1386 aa11.73□□□□□ -0.53
GPHN-201ENST00000315266 RGPD1P0DJD0 1748 aa11.73□□□□□ -0.53
GPHN-201ENST00000315266 PHRF1Q9P1Y6 1649 aaKnown RBP11.73□□□□□ -0.53
GPHN-201ENST00000315266 SPATA31A1Q5TZJ5 1347 aa11.73□□□□□ -0.53
GPHN-201ENST00000315266 BECN2A8MW95 431 aa11.73□□□□□ -0.53
GPHN-201ENST00000315266 GNPATO15228 680 aa11.73□□□□□ -0.53
GPHN-201ENST00000315266 SDF4Q9BRK5 362 aa11.73□□□□□ -0.53
GPHN-201ENST00000315266 CAMK4Q16566 473 aa11.72□□□□□ -0.53
GPHN-201ENST00000315266 SIRT2Q8IXJ6 389 aa11.72□□□□□ -0.53
GPHN-201ENST00000315266 MIGA1Q8NAN2 632 aa11.72□□□□□ -0.53
GPHN-201ENST00000315266 IRS4O14654 1257 aaPredicted RBP11.72□□□□□ -0.53
GPHN-201ENST00000315266 TRPC5Q9UL62 973 aaPredicted RBP11.72□□□□□ -0.53
GPHN-201ENST00000315266 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.72□□□□□ -0.53
GPHN-201ENST00000315266 WDR33Q9C0J8 1336 aaKnown RBP11.72□□□□□ -0.53
GPHN-201ENST00000315266 CDK11BP21127 795 aaKnown RBP11.72□□□□□ -0.53
GPHN-201ENST00000315266 SF3B2Q13435 895 aaKnown RBP11.72□□□□□ -0.53
GPHN-201ENST00000315266 FAM227BQ96M60 508 aa11.72□□□□□ -0.53
GPHN-201ENST00000315266 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.72□□□□□ -0.53
GPHN-201ENST00000315266 RBSNQ9H1K0 784 aa11.72□□□□□ -0.53
GPHN-201ENST00000315266 ERBB4Q15303 1308 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms