RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 ADCK5Q3MIX3 580 aa22.91■■□□□ 1.26
CD55-201ENST00000314754 CREB3L3Q68CJ9 461 aa22.91■■□□□ 1.26
CD55-201ENST00000314754 GIGYF2Q6Y7W6 1299 aaKnown RBP22.91■■□□□ 1.26
CD55-201ENST00000314754 SYTL4Q96C24 671 aaPredicted RBP22.91■■□□□ 1.26
CD55-201ENST00000314754 JAKMIP1Q96N16 626 aaKnown RBP22.91■■□□□ 1.26
CD55-201ENST00000314754 BRD1O95696 1058 aa22.9■■□□□ 1.26
CD55-201ENST00000314754 CYP19A1P11511 503 aaPredicted RBP22.9■■□□□ 1.26
CD55-201ENST00000314754 KLHL40Q2TBA0 621 aa22.9■■□□□ 1.26
CD55-201ENST00000314754 LRRC24Q50LG9 513 aa22.9■■□□□ 1.26
CD55-201ENST00000314754 VPS53Q5VIR6 699 aa22.9■■□□□ 1.26
CD55-201ENST00000314754 LARP6Q9BRS8 491 aaKnown RBP22.9■■□□□ 1.26
CD55-201ENST00000314754 PLA2G12BQ9BX93 195 aa22.9■■□□□ 1.26
CD55-201ENST00000314754 ISY1Q9ULR0 285 aaKnown RBP22.9■■□□□ 1.26
CD55-201ENST00000314754 CHGBP05060 677 aa22.9■■□□□ 1.26
CD55-201ENST00000314754 RUFY3Q7L099 469 aa22.9■■□□□ 1.26
CD55-201ENST00000314754 CHAMP1Q96JM3 812 aa22.9■■□□□ 1.26
CD55-201ENST00000314754 ARXQ96QS3 562 aa22.9■■□□□ 1.26
CD55-201ENST00000314754 CYP46A1Q9Y6A2 500 aa22.9■■□□□ 1.26
CD55-201ENST00000314754 ANKRD36CQ5JPF3 1778 aa22.89■■□□□ 1.26
CD55-201ENST00000314754 ZNF609O15014 1411 aa22.89■■□□□ 1.26
CD55-201ENST00000314754 ZBTB38Q8NAP3 1195 aaPredicted RBP22.89■■□□□ 1.26
CD55-201ENST00000314754 DNAJC2Q99543 621 aaKnown RBP22.89■■□□□ 1.26
CD55-201ENST00000314754 FBXO3Q9UK99 471 aa22.89■■□□□ 1.26
CD55-201ENST00000314754 NUP98P52948 1817 aa22.89■■□□□ 1.25
CD55-201ENST00000314754 CCDC57Q2TAC2 916 aa22.89■■□□□ 1.25
CD55-201ENST00000314754 RNF20Q5VTR2 975 aa22.89■■□□□ 1.25
CD55-201ENST00000314754 ZNF589Q86UQ0 364 aaPredicted RBP22.89■■□□□ 1.25
CD55-201ENST00000314754 FOXD4L5Q5VV16 416 aaPredicted RBP22.88■■□□□ 1.25
CD55-201ENST00000314754 FOXD4L4Q8WXT5 416 aaPredicted RBP22.88■■□□□ 1.25
CD55-201ENST00000314754 NEUROD6Q96NK8 337 aa22.88■■□□□ 1.25
CD55-201ENST00000314754 THRAP3Q9Y2W1 955 aaKnown RBP22.88■■□□□ 1.25
CD55-201ENST00000314754 DDX49Q9Y6V7 483 aaKnown RBP22.88■■□□□ 1.25
CD55-201ENST00000314754 SLC27A2O14975 620 aa22.88■■□□□ 1.25
CD55-201ENST00000314754 HLFQ16534 295 aa22.88■■□□□ 1.25
CD55-201ENST00000314754 HSP90AB3PQ58FF7 597 aa22.88■■□□□ 1.25
CD55-201ENST00000314754 FAM89AQ96GI7 184 aa22.88■■□□□ 1.25
CD55-201ENST00000314754 PUS3Q9BZE2 481 aaKnown RBP22.88■■□□□ 1.25
CD55-201ENST00000314754 PDRG1Q9NUG6 133 aa22.88■■□□□ 1.25
CD55-201ENST00000314754 LMBRD1Q9NUN5 540 aa22.88■■□□□ 1.25
CD55-201ENST00000314754 RPAP1Q9BWH6 1393 aaPredicted RBP22.88■■□□□ 1.25
CD55-201ENST00000314754 SPATA31A1Q5TZJ5 1347 aa22.87■■□□□ 1.25
CD55-201ENST00000314754 TICAM2Q86XR7 235 aa22.87■■□□□ 1.25
CD55-201ENST00000314754 TAF5LO75529 589 aa22.86■■□□□ 1.25
CD55-201ENST00000314754 PSMA5P28066 241 aa22.86■■□□□ 1.25
CD55-201ENST00000314754 PRIM1P49642 420 aaKnown RBP22.86■■□□□ 1.25
CD55-201ENST00000314754 TIMM10P62072 90 aa22.86■■□□□ 1.25
CD55-201ENST00000314754 COL9A3Q14050 684 aaPredicted RBP22.86■■□□□ 1.25
CD55-201ENST00000314754 KBTBD3Q8NAB2 608 aa22.86■■□□□ 1.25
CD55-201ENST00000314754 CCDC85AQ96PX6 553 aaPredicted RBP22.86■■□□□ 1.25
CD55-201ENST00000314754 HMG20BQ9P0W2 317 aa22.86■■□□□ 1.25
CD55-201ENST00000314754 ZBTB1Q9Y2K1 713 aa22.86■■□□□ 1.25
CD55-201ENST00000314754 SYNE4Q8N205 404 aa22.86■■□□□ 1.25
CD55-201ENST00000314754 CDHR2Q9BYE9 1310 aa22.86■■□□□ 1.25
CD55-201ENST00000314754 PALLDQ8WX93 1383 aa22.85■■□□□ 1.25
CD55-201ENST00000314754 CSF1RP07333 972 aa22.85■■□□□ 1.25
CD55-201ENST00000314754 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.85■■□□□ 1.25
CD55-201ENST00000314754 USPL1Q5W0Q7 1092 aa22.85■■□□□ 1.25
CD55-201ENST00000314754 DDX46Q7L014 1031 aaKnown RBP22.85■■□□□ 1.25
CD55-201ENST00000314754 ZSCAN31Q96LW9 406 aaPredicted RBP22.85■■□□□ 1.25
CD55-201ENST00000314754 SH2B1Q9NRF2 756 aaPredicted RBP22.85■■□□□ 1.25
CD55-201ENST00000314754 CEP126Q9P2H0 1117 aa22.85■■□□□ 1.25
CD55-201ENST00000314754 MYH3P11055 1940 aa22.84■■□□□ 1.25
CD55-201ENST00000314754 A0A1B0GUL7 405 aa22.84■■□□□ 1.25
CD55-201ENST00000314754 TSGA10IPQ3SY00 556 aa22.84■■□□□ 1.25
CD55-201ENST00000314754 NLRP10Q86W26 655 aa22.84■■□□□ 1.25
CD55-201ENST00000314754 TAF6LQ9Y6J9 622 aa22.84■■□□□ 1.25
CD55-201ENST00000314754 LARGE1O95461 756 aa22.84■■□□□ 1.25
CD55-201ENST00000314754 GPTP24298 496 aa22.84■■□□□ 1.25
CD55-201ENST00000314754 DDB1Q16531 1140 aa22.84■■□□□ 1.25
CD55-201ENST00000314754 WDR33Q9C0J8 1336 aaKnown RBP22.83■■□□□ 1.25
CD55-201ENST00000314754 IL6STP40189 918 aaPredicted RBP22.83■■□□□ 1.25
CD55-201ENST00000314754 MCMDC2Q4G0Z9 681 aa22.83■■□□□ 1.25
CD55-201ENST00000314754 PAG1Q9NWQ8 432 aa22.83■■□□□ 1.25
CD55-201ENST00000314754 XRCC6P12956 609 aaKnown RBP eCLIP22.82■■□□□ 1.24
CD55-201ENST00000314754 MRE11P49959 708 aa22.82■■□□□ 1.24
CD55-201ENST00000314754 IFIT5Q13325 482 aaKnown RBP22.82■■□□□ 1.24
CD55-201ENST00000314754 SPEF2Q9C093 1822 aa22.82■■□□□ 1.24
CD55-201ENST00000314754 SH3TC1Q8TE82 1336 aa22.82■■□□□ 1.24
CD55-201ENST00000314754 ERVV-1B6SEH8 477 aa22.82■■□□□ 1.24
CD55-201ENST00000314754 SEC62Q99442 399 aaKnown RBP22.82■■□□□ 1.24
CD55-201ENST00000314754 AKAP2Q9Y2D5 859 aa22.82■■□□□ 1.24
CD55-201ENST00000314754 TCHHQ07283 1943 aa22.81■■□□□ 1.24
CD55-201ENST00000314754 CCDC129Q6ZRS4 1044 aa22.81■■□□□ 1.24
CD55-201ENST00000314754 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.81■■□□□ 1.24
CD55-201ENST00000314754 NUTM2BA6NNL0 878 aaPredicted RBP22.81■■□□□ 1.24
CD55-201ENST00000314754 NUTM2EB1AL46 878 aaPredicted RBP22.81■■□□□ 1.24
CD55-201ENST00000314754 GOLIM4O00461 696 aa22.81■■□□□ 1.24
CD55-201ENST00000314754 PRPF40AO75400 957 aaKnown RBP22.81■■□□□ 1.24
CD55-201ENST00000314754 SLFNL1Q499Z3 407 aa22.81■■□□□ 1.24
CD55-201ENST00000314754 TAF7LQ5H9L4 462 aa22.81■■□□□ 1.24
CD55-201ENST00000314754 NUTM2AQ8IVF1 878 aaPredicted RBP22.81■■□□□ 1.24
CD55-201ENST00000314754 BLOC1S2Q6QNY1 142 aa22.8■■□□□ 1.24
CD55-201ENST00000314754 A0A0G2JS52 829 aa22.8■■□□□ 1.24
CD55-201ENST00000314754 DTNBO60941 627 aa22.8■■□□□ 1.24
CD55-201ENST00000314754 IFIT1P09914 478 aaKnown RBP22.8■■□□□ 1.24
CD55-201ENST00000314754 SMC3Q9UQE7 1217 aa22.8■■□□□ 1.24
CD55-201ENST00000314754 U3KPZ7 1027 aaPredicted RBP22.8■■□□□ 1.24
CD55-201ENST00000314754 KRT32Q14532 448 aa22.79■■□□□ 1.24
CD55-201ENST00000314754 DZIP3Q86Y13 1208 aaKnown RBP22.79■■□□□ 1.24
CD55-201ENST00000314754 ACSBG1Q96GR2 724 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms