RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 XAGE3Q8WTP9 111 aa16.05■□□□□ 0.16
ZNF541-202ENST00000314121 YTHDC2Q9H6S0 1430 aaKnown RBP16.05■□□□□ 0.16
ZNF541-202ENST00000314121 WDR7Q9Y4E6 1490 aa16.04■□□□□ 0.16
ZNF541-202ENST00000314121 TERF1P54274 439 aa16.04■□□□□ 0.16
ZNF541-202ENST00000314121 RIMS2Q9UQ26 1411 aa16.04■□□□□ 0.16
ZNF541-202ENST00000314121 UHRF1BP1LA0JNW5 1464 aa16.04■□□□□ 0.16
ZNF541-202ENST00000314121 CCDC191Q8NCU4 936 aa16.04■□□□□ 0.16
ZNF541-202ENST00000314121 ANKRD24Q8TF21 1146 aa16.04■□□□□ 0.16
ZNF541-202ENST00000314121 POTEB2H3BUK9 544 aa16.04■□□□□ 0.16
ZNF541-202ENST00000314121 SSBP05455 408 aaKnown RBP eCLIP16.04■□□□□ 0.16
ZNF541-202ENST00000314121 PTGS1P23219 599 aa16.04■□□□□ 0.16
ZNF541-202ENST00000314121 CEBPAP49715 358 aaPredicted RBP16.04■□□□□ 0.16
ZNF541-202ENST00000314121 SBNO2Q9Y2G9 1366 aa16.04■□□□□ 0.16
ZNF541-202ENST00000314121 MAGI2Q86UL8 1455 aa16.03■□□□□ 0.16
ZNF541-202ENST00000314121 AOPEPQ8N6M6 819 aa16.03■□□□□ 0.16
ZNF541-202ENST00000314121 JARID2Q92833 1246 aaPredicted RBP16.03■□□□□ 0.16
ZNF541-202ENST00000314121 TRMT112Q9UI30 125 aaKnown RBP16.03■□□□□ 0.16
ZNF541-202ENST00000314121 YEATS4O95619 227 aa16.03■□□□□ 0.16
ZNF541-202ENST00000314121 SLC5A1P13866 664 aa16.03■□□□□ 0.16
ZNF541-202ENST00000314121 USP8P40818 1118 aa16.03■□□□□ 0.16
ZNF541-202ENST00000314121 SYCP1Q15431 976 aa16.03■□□□□ 0.16
ZNF541-202ENST00000314121 ZFYVE27Q5T4F4 411 aa16.03■□□□□ 0.16
ZNF541-202ENST00000314121 NUP88Q99567 741 aaPredicted RBP16.03■□□□□ 0.16
ZNF541-202ENST00000314121 AOX1Q06278 1338 aa16.03■□□□□ 0.16
ZNF541-202ENST00000314121 RANBP6O60518 1105 aaKnown RBP16.02■□□□□ 0.16
ZNF541-202ENST00000314121 SLU7O95391 586 aaKnown RBP16.02■□□□□ 0.16
ZNF541-202ENST00000314121 ATP2B2Q01814 1243 aa16.02■□□□□ 0.16
ZNF541-202ENST00000314121 FKBP15Q5T1M5 1219 aa16.02■□□□□ 0.16
ZNF541-202ENST00000314121 CCDC94Q9BW85 323 aaPredicted RBP16.02■□□□□ 0.16
ZNF541-202ENST00000314121 LMBR1LQ6UX01 489 aa16.02■□□□□ 0.16
ZNF541-202ENST00000314121 RAB11FIP4Q86YS3 637 aa16.02■□□□□ 0.16
ZNF541-202ENST00000314121 TNRQ92752 1358 aa16.02■□□□□ 0.15
ZNF541-202ENST00000314121 MAP3K19Q56UN5 1328 aa16.02■□□□□ 0.15
ZNF541-202ENST00000314121 SGSM2O43147 1006 aa16.02■□□□□ 0.15
ZNF541-202ENST00000314121 CENPHQ9H3R5 247 aa16.02■□□□□ 0.15
ZNF541-202ENST00000314121 DNAI1Q9UI46 699 aa16.02■□□□□ 0.15
ZNF541-202ENST00000314121 KDM5CP41229 1560 aa16.01■□□□□ 0.15
ZNF541-202ENST00000314121 CAVIN4Q5BKX8 364 aa16.01■□□□□ 0.15
ZNF541-202ENST00000314121 TAF4BQ92750 862 aa16.01■□□□□ 0.15
ZNF541-202ENST00000314121 IL15P40933 162 aaPredicted RBP16.01■□□□□ 0.15
ZNF541-202ENST00000314121 LUZP1Q86V48 1076 aa16.01■□□□□ 0.15
ZNF541-202ENST00000314121 MAP3K5Q99683 1374 aa16.01■□□□□ 0.15
ZNF541-202ENST00000314121 ALG1Q9BT22 464 aa16.01■□□□□ 0.15
ZNF541-202ENST00000314121 SLC26A6Q9BXS9 759 aa16.01■□□□□ 0.15
ZNF541-202ENST00000314121 KIF24Q5T7B8 1368 aa16.01■□□□□ 0.15
ZNF541-202ENST00000314121 SPTLC2O15270 562 aa16.01■□□□□ 0.15
ZNF541-202ENST00000314121 CPA1P15085 419 aa16.01■□□□□ 0.15
ZNF541-202ENST00000314121 CATIPQ7Z7H3 387 aa16.01■□□□□ 0.15
ZNF541-202ENST00000314121 CCDC12Q8WUD4 166 aaPredicted RBP16.01■□□□□ 0.15
ZNF541-202ENST00000314121 BABAM1Q9NWV8 329 aa16.01■□□□□ 0.15
ZNF541-202ENST00000314121 ABCA5Q8WWZ7 1642 aa16■□□□□ 0.15
ZNF541-202ENST00000314121 ABCC4O15439 1325 aa16■□□□□ 0.15
ZNF541-202ENST00000314121 GTF2F1P35269 517 aaKnown RBP eCLIP16■□□□□ 0.15
ZNF541-202ENST00000314121 DHX32Q7L7V1 743 aaKnown RBP16■□□□□ 0.15
ZNF541-202ENST00000314121 CCDC144CPQ8IYA2 1237 aa16■□□□□ 0.15
ZNF541-202ENST00000314121 ZBTB43O43298 467 aa16■□□□□ 0.15
ZNF541-202ENST00000314121 BRD1O95696 1058 aa16■□□□□ 0.15
ZNF541-202ENST00000314121 CWF19L2Q2TBE0 894 aaKnown RBP16■□□□□ 0.15
ZNF541-202ENST00000314121 PYM1Q9BRP8 204 aaKnown RBP16■□□□□ 0.15
ZNF541-202ENST00000314121 ZNF287Q9HBT7 754 aa16■□□□□ 0.15
ZNF541-202ENST00000314121 ABCC2Q92887 1545 aa16■□□□□ 0.15
ZNF541-202ENST00000314121 KRT28Q7Z3Y7 464 aa16■□□□□ 0.15
ZNF541-202ENST00000314121 SRRTQ9BXP5 876 aaKnown RBP16■□□□□ 0.15
ZNF541-202ENST00000314121 TMEM63CQ9P1W3 806 aa16■□□□□ 0.15
ZNF541-202ENST00000314121 USO1O60763 962 aaKnown RBP15.99■□□□□ 0.15
ZNF541-202ENST00000314121 ATL3Q6DD88 541 aa15.99■□□□□ 0.15
ZNF541-202ENST00000314121 MFSD6Q6ZSS7 791 aa15.99■□□□□ 0.15
ZNF541-202ENST00000314121 TEX13AQ9BXU3 409 aaPredicted RBP15.99■□□□□ 0.15
ZNF541-202ENST00000314121 PAFAH1B1P43034 410 aa15.99■□□□□ 0.15
ZNF541-202ENST00000314121 SNX14Q9Y5W7 946 aa15.99■□□□□ 0.15
ZNF541-202ENST00000314121 KDM6BO15054 1643 aa15.99■□□□□ 0.15
ZNF541-202ENST00000314121 LMOD1P29536 600 aaPredicted RBP15.99■□□□□ 0.15
ZNF541-202ENST00000314121 NLRP5P59047 1200 aa15.99■□□□□ 0.15
ZNF541-202ENST00000314121 EDC4Q6P2E9 1401 aaKnown RBP15.99■□□□□ 0.15
ZNF541-202ENST00000314121 CCDC194A0A1B0GVG4 234 aa15.99■□□□□ 0.15
ZNF541-202ENST00000314121 PPP1R9BQ96SB3 815 aa15.99■□□□□ 0.15
ZNF541-202ENST00000314121 TMX1Q9H3N1 280 aa15.99■□□□□ 0.15
ZNF541-202ENST00000314121 ARFGAP3Q9NP61 516 aa15.99■□□□□ 0.15
ZNF541-202ENST00000314121 GSPT1P15170 499 aaKnown RBP15.98■□□□□ 0.15
ZNF541-202ENST00000314121 MKNK2Q9HBH9 465 aa15.98■□□□□ 0.15
ZNF541-202ENST00000314121 RTL1A6NKG5 1358 aa15.98■□□□□ 0.15
ZNF541-202ENST00000314121 PTPDC1A2A3K4 754 aa15.98■□□□□ 0.15
ZNF541-202ENST00000314121 GPTP24298 496 aa15.98■□□□□ 0.15
ZNF541-202ENST00000314121 SLC39A6Q13433 755 aa15.98■□□□□ 0.15
ZNF541-202ENST00000314121 PAG1Q9NWQ8 432 aa15.98■□□□□ 0.15
ZNF541-202ENST00000314121 NCKAP5LQ9HCH0 1330 aa15.98■□□□□ 0.15
ZNF541-202ENST00000314121 N4BP3O15049 544 aa15.98■□□□□ 0.15
ZNF541-202ENST00000314121 FGFR1OPO95684 399 aaKnown RBP15.98■□□□□ 0.15
ZNF541-202ENST00000314121 CACNA2D4Q7Z3S7 1137 aa15.98■□□□□ 0.15
ZNF541-202ENST00000314121 FEZ1Q99689 392 aa15.98■□□□□ 0.15
ZNF541-202ENST00000314121 UQCRFS1P1P0C7P4 283 aa15.97■□□□□ 0.15
ZNF541-202ENST00000314121 ZNF652Q9Y2D9 606 aa15.97■□□□□ 0.15
ZNF541-202ENST00000314121 SHTN1A0MZ66 631 aa15.97■□□□□ 0.15
ZNF541-202ENST00000314121 GTPBP4Q9BZE4 634 aaKnown RBP15.97■□□□□ 0.15
ZNF541-202ENST00000314121 PNMA6EA0A0J9YXQ4 647 aa15.97■□□□□ 0.15
ZNF541-202ENST00000314121 FSD2A1L4K1 749 aa15.97■□□□□ 0.15
ZNF541-202ENST00000314121 MARCKSP29966 332 aaPredicted RBP15.97■□□□□ 0.15
ZNF541-202ENST00000314121 ZSWIM4Q9H7M6 989 aa15.97■□□□□ 0.15
ZNF541-202ENST00000314121 BMP15O95972 392 aa15.96■□□□□ 0.15
ZNF541-202ENST00000314121 HOXB7P09629 217 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms