RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CWF19L2Q2TBE0 894 aaKnown RBP16.35■□□□□ 0.21
MKS1-201ENST00000313863 USPL1Q5W0Q7 1092 aa16.35■□□□□ 0.21
MKS1-201ENST00000313863 LARP1Q6PKG0 1096 aaKnown RBP16.35■□□□□ 0.21
MKS1-201ENST00000313863 TRIM5Q9C035 493 aa16.35■□□□□ 0.21
MKS1-201ENST00000313863 CCDC8Q9H0W5 538 aaPredicted RBP16.35■□□□□ 0.21
MKS1-201ENST00000313863 BICC1Q9H694 974 aaKnown RBP16.35■□□□□ 0.21
MKS1-201ENST00000313863 CTAGE5O15320 804 aa16.34■□□□□ 0.21
MKS1-201ENST00000313863 PTGS1P23219 599 aa16.34■□□□□ 0.21
MKS1-201ENST00000313863 LUZP1Q86V48 1076 aa16.34■□□□□ 0.21
MKS1-201ENST00000313863 PLA2G4DQ86XP0 818 aa16.34■□□□□ 0.21
MKS1-201ENST00000313863 BICD2Q8TD16 824 aa16.34■□□□□ 0.21
MKS1-201ENST00000313863 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
MKS1-201ENST00000313863 NEMFO60524 1076 aa16.34■□□□□ 0.21
MKS1-201ENST00000313863 ANKRD7Q92527 254 aa16.34■□□□□ 0.21
MKS1-201ENST00000313863 GTF3C6Q969F1 213 aa16.34■□□□□ 0.21
MKS1-201ENST00000313863 BOLA2Q9H3K6 86 aa16.34■□□□□ 0.21
MKS1-201ENST00000313863 CHMP3Q9Y3E7 222 aa16.34■□□□□ 0.21
MKS1-201ENST00000313863 ADAMTS7Q9UKP4 1686 aa16.33■□□□□ 0.21
MKS1-201ENST00000313863 CAMTA1Q9Y6Y1 1673 aa16.33■□□□□ 0.21
MKS1-201ENST00000313863 SMTNL1A8MU46 457 aa16.33■□□□□ 0.21
MKS1-201ENST00000313863 H3BQV1 296 aa16.33■□□□□ 0.21
MKS1-201ENST00000313863 PPP4R3BQ5MIZ7 849 aa16.33■□□□□ 0.21
MKS1-201ENST00000313863 IFFO2Q5TF58 517 aa16.33■□□□□ 0.21
MKS1-201ENST00000313863 CCDC186Q7Z3E2 898 aa16.33■□□□□ 0.21
MKS1-201ENST00000313863 CKAP2LQ8IYA6 745 aa16.33■□□□□ 0.21
MKS1-201ENST00000313863 DDX54Q8TDD1 881 aaKnown RBP16.33■□□□□ 0.21
MKS1-201ENST00000313863 CHMP4CQ96CF2 233 aa16.33■□□□□ 0.21
MKS1-201ENST00000313863 PAXBP1Q9Y5B6 917 aa16.33■□□□□ 0.21
MKS1-201ENST00000313863 ZNF165P49910 485 aa16.33■□□□□ 0.2
MKS1-201ENST00000313863 ARID3AQ99856 593 aa16.33■□□□□ 0.2
MKS1-201ENST00000313863 LLPHQ9BRT6 129 aaKnown RBP16.33■□□□□ 0.2
MKS1-201ENST00000313863 TAF5LO75529 589 aa16.32■□□□□ 0.2
MKS1-201ENST00000313863 ATP5JP18859 108 aa16.32■□□□□ 0.2
MKS1-201ENST00000313863 DMTNQ08495 405 aa16.32■□□□□ 0.2
MKS1-201ENST00000313863 PROSER3Q2NL68 480 aa16.32■□□□□ 0.2
MKS1-201ENST00000313863 ATL3Q6DD88 541 aa16.32■□□□□ 0.2
MKS1-201ENST00000313863 NEK1Q96PY6 1258 aa16.32■□□□□ 0.2
MKS1-201ENST00000313863 GTPBP4Q9BZE4 634 aaKnown RBP16.32■□□□□ 0.2
MKS1-201ENST00000313863 TFIP11Q9UBB9 837 aaKnown RBP16.32■□□□□ 0.2
MKS1-201ENST00000313863 GOLGA6L19H0YKK7 550 aa16.31■□□□□ 0.2
MKS1-201ENST00000313863 HMGB1P09429 215 aaKnown RBP16.31■□□□□ 0.2
MKS1-201ENST00000313863 RESTQ13127 1097 aa16.31■□□□□ 0.2
MKS1-201ENST00000313863 RIC3Q7Z5B4 369 aa16.31■□□□□ 0.2
MKS1-201ENST00000313863 TICAM2Q86XR7 235 aa16.31■□□□□ 0.2
MKS1-201ENST00000313863 KAZALD1Q96I82 304 aa16.31■□□□□ 0.2
MKS1-201ENST00000313863 PSME1Q06323 249 aa16.31■□□□□ 0.2
MKS1-201ENST00000313863 ZSCAN25Q6NSZ9 544 aa16.31■□□□□ 0.2
MKS1-201ENST00000313863 FAM173BQ6P4H8 233 aa16.31■□□□□ 0.2
MKS1-201ENST00000313863 TSC1Q92574 1164 aa16.31■□□□□ 0.2
MKS1-201ENST00000313863 FEZ1Q99689 392 aa16.31■□□□□ 0.2
MKS1-201ENST00000313863 PXDNQ92626 1479 aa16.31■□□□□ 0.2
MKS1-201ENST00000313863 SARM1Q6SZW1 724 aa16.3■□□□□ 0.2
MKS1-201ENST00000313863 CLIP2Q9UDT6 1046 aa16.3■□□□□ 0.2
MKS1-201ENST00000313863 HSP90B1P14625 803 aaKnown RBP16.3■□□□□ 0.2
MKS1-201ENST00000313863 STK3Q13188 491 aa16.3■□□□□ 0.2
MKS1-201ENST00000313863 NAA16Q6N069 864 aaPredicted RBP16.3■□□□□ 0.2
MKS1-201ENST00000313863 BRF1Q92994 677 aa16.3■□□□□ 0.2
MKS1-201ENST00000313863 COPRSQ9NQ92 184 aa16.3■□□□□ 0.2
MKS1-201ENST00000313863 TLR7Q9NYK1 1049 aaKnown RBP16.3■□□□□ 0.2
MKS1-201ENST00000313863 NR1I2O75469 434 aa16.29■□□□□ 0.2
MKS1-201ENST00000313863 STX1AQ16623 288 aa16.29■□□□□ 0.2
MKS1-201ENST00000313863 ZNF589Q86UQ0 364 aaPredicted RBP16.29■□□□□ 0.2
MKS1-201ENST00000313863 TCEANC2Q96MN5 208 aa16.29■□□□□ 0.2
MKS1-201ENST00000313863 SIL1Q9H173 461 aa16.29■□□□□ 0.2
MKS1-201ENST00000313863 SLIT3O75094 1523 aa16.29■□□□□ 0.2
MKS1-201ENST00000313863 LRRC59Q96AG4 307 aaKnown RBP16.28■□□□□ 0.2
MKS1-201ENST00000313863 MRFAP1L1Q96HT8 127 aa16.28■□□□□ 0.2
MKS1-201ENST00000313863 PGBD1Q96JS3 809 aa16.28■□□□□ 0.2
MKS1-201ENST00000313863 AFDNP55196 1824 aaKnown RBP16.28■□□□□ 0.2
MKS1-201ENST00000313863 COL15A1P39059 1388 aa16.28■□□□□ 0.2
MKS1-201ENST00000313863 LAMA4Q16363 1823 aa16.28■□□□□ 0.2
MKS1-201ENST00000313863 NEURL1BA8MQ27 555 aa16.28■□□□□ 0.2
MKS1-201ENST00000313863 AIMP1Q12904 312 aaKnown RBP16.28■□□□□ 0.2
MKS1-201ENST00000313863 GCKRQ14397 625 aa16.28■□□□□ 0.2
MKS1-201ENST00000313863 Q6ZUG5 572 aa16.28■□□□□ 0.2
MKS1-201ENST00000313863 JARID2Q92833 1246 aaPredicted RBP16.28■□□□□ 0.2
MKS1-201ENST00000313863 ZNF396Q96N95 335 aaPredicted RBP16.28■□□□□ 0.2
MKS1-201ENST00000313863 DNAJC25Q9H1X3 360 aa16.28■□□□□ 0.2
MKS1-201ENST00000313863 SCN11AQ9UI33 1791 aa16.27■□□□□ 0.2
MKS1-201ENST00000313863 IGKV5-2P06315 115 aa16.27■□□□□ 0.2
MKS1-201ENST00000313863 TNNT1P13805 278 aa16.27■□□□□ 0.2
MKS1-201ENST00000313863 FGD1P98174 961 aa16.27■□□□□ 0.2
MKS1-201ENST00000313863 MCMDC2Q4G0Z9 681 aa16.27■□□□□ 0.2
MKS1-201ENST00000313863 CCDC73Q6ZRK6 1079 aa16.27■□□□□ 0.2
MKS1-201ENST00000313863 CCDC112Q8NEF3 446 aa16.27■□□□□ 0.2
MKS1-201ENST00000313863 SMARCC2Q8TAQ2 1214 aa16.27■□□□□ 0.2
MKS1-201ENST00000313863 PFKFB2O60825 505 aa16.26■□□□□ 0.19
MKS1-201ENST00000313863 DTNBO60941 627 aa16.26■□□□□ 0.19
MKS1-201ENST00000313863 TPD52L1Q16890 204 aaPredicted RBP16.26■□□□□ 0.19
MKS1-201ENST00000313863 TNNI3KQ59H18 835 aa16.26■□□□□ 0.19
MKS1-201ENST00000313863 METTL22Q9BUU2 404 aaPredicted RBP16.26■□□□□ 0.19
MKS1-201ENST00000313863 CGNQ9P2M7 1197 aaKnown RBP16.26■□□□□ 0.19
MKS1-201ENST00000313863 FPGT-TNNI3KV9GXZ4 949 aa16.26■□□□□ 0.19
MKS1-201ENST00000313863 ZSCAN20P17040 1043 aaPredicted RBP16.26■□□□□ 0.19
MKS1-201ENST00000313863 CBX1P83916 185 aa16.26■□□□□ 0.19
MKS1-201ENST00000313863 PDIA6Q15084 440 aa16.26■□□□□ 0.19
MKS1-201ENST00000313863 ARHGEF25Q86VW2 580 aa16.26■□□□□ 0.19
MKS1-201ENST00000313863 ANKRD24Q8TF21 1146 aa16.26■□□□□ 0.19
MKS1-201ENST00000313863 RCOR1Q9UKL0 485 aa16.26■□□□□ 0.19
MKS1-201ENST00000313863 C5P01031 1676 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms