RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 SPDYE4A6NLX3 237 aa21.57■■□□□ 1.04
CDK5R1-201ENST00000313401 UVSSAQ2YD98 709 aa21.57■■□□□ 1.04
CDK5R1-201ENST00000313401 CEP57L1Q8IYX8 460 aa21.57■■□□□ 1.04
CDK5R1-201ENST00000313401 ERCC4Q92889 916 aaPredicted RBP21.57■■□□□ 1.04
CDK5R1-201ENST00000313401 ZNF594Q96JF6 807 aaPredicted RBP21.57■■□□□ 1.04
CDK5R1-201ENST00000313401 TPCN1Q9ULQ1 816 aa21.57■■□□□ 1.04
CDK5R1-201ENST00000313401 USP16Q9Y5T5 823 aa21.57■■□□□ 1.04
CDK5R1-201ENST00000313401 TBC1D2BQ9UPU7 963 aa21.56■■□□□ 1.04
CDK5R1-201ENST00000313401 CFAP74Q9C0B2 1584 aa21.56■■□□□ 1.04
CDK5R1-201ENST00000313401 DHX16O60231 1041 aaKnown RBP21.56■■□□□ 1.04
CDK5R1-201ENST00000313401 IMMTQ16891 758 aaKnown RBP21.56■■□□□ 1.04
CDK5R1-201ENST00000313401 FAM200AQ8TCP9 573 aa21.56■■□□□ 1.04
CDK5R1-201ENST00000313401 C8orf76Q96K31 380 aa21.56■■□□□ 1.04
CDK5R1-201ENST00000313401 ZMYND15Q9H091 742 aa21.56■■□□□ 1.04
CDK5R1-201ENST00000313401 DDX19AQ9NUU7 478 aaKnown RBP21.56■■□□□ 1.04
CDK5R1-201ENST00000313401 GOLGA8BA8MQT2 603 aa21.56■■□□□ 1.04
CDK5R1-201ENST00000313401 MCMDC2Q4G0Z9 681 aa21.56■■□□□ 1.04
CDK5R1-201ENST00000313401 NUP133Q8WUM0 1156 aa21.56■■□□□ 1.04
CDK5R1-201ENST00000313401 VPS37DQ86XT2 251 aa21.55■■□□□ 1.04
CDK5R1-201ENST00000313401 CUL4AQ13619 759 aa21.55■■□□□ 1.04
CDK5R1-201ENST00000313401 SAFBQ15424 915 aaKnown RBP eCLIP21.55■■□□□ 1.04
CDK5R1-201ENST00000313401 HS1BP3Q53T59 392 aa21.55■■□□□ 1.04
CDK5R1-201ENST00000313401 MYO3AQ8NEV4 1616 aa21.55■■□□□ 1.04
CDK5R1-201ENST00000313401 VWDEQ8N2E2 1590 aa21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 SERPINC1P01008 464 aa21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 TNNT1P13805 278 aa21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 MTERF4Q7Z6M4 381 aaKnown RBP21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 LIG1P18858 919 aa21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 PDCL2Q8N4E4 241 aa21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 PKNOX2Q96KN3 472 aa21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 CWC25Q9NXE8 425 aaPredicted RBP21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 CPSF1Q10570 1443 aaKnown RBP21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 OTUD7BQ6GQQ9 843 aa21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 PI4K2BQ8TCG2 481 aa21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 PIBF1Q8WXW3 757 aa21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 HMG20BQ9P0W2 317 aa21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 MTMR6Q9Y217 621 aa21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 ERICH2A1L162 156 aa21.54■■□□□ 1.04
CDK5R1-201ENST00000313401 CD163L1Q9NR16 1453 aa21.53■■□□□ 1.04
CDK5R1-201ENST00000313401 HSP90AA4PQ58FG1 418 aa21.53■■□□□ 1.04
CDK5R1-201ENST00000313401 TTLL5Q6EMB2 1281 aa21.53■■□□□ 1.04
CDK5R1-201ENST00000313401 DDIT3P35638 169 aa21.52■■□□□ 1.04
CDK5R1-201ENST00000313401 ORC3Q9UBD5 711 aaPredicted RBP21.52■■□□□ 1.04
CDK5R1-201ENST00000313401 AOX1Q06278 1338 aa21.52■■□□□ 1.04
CDK5R1-201ENST00000313401 ATP10DQ9P241 1426 aa21.52■■□□□ 1.04
CDK5R1-201ENST00000313401 PIK3C2BO00750 1634 aa21.52■■□□□ 1.04
CDK5R1-201ENST00000313401 RPS6KB1P23443 525 aa21.52■■□□□ 1.04
CDK5R1-201ENST00000313401 RXRAP19793 462 aa21.52■■□□□ 1.04
CDK5R1-201ENST00000313401 GCKRQ14397 625 aa21.52■■□□□ 1.04
CDK5R1-201ENST00000313401 CTNNA3Q9UI47 895 aa21.52■■□□□ 1.04
CDK5R1-201ENST00000313401 ZC3H13Q5T200 1668 aaKnown RBP21.52■■□□□ 1.03
CDK5R1-201ENST00000313401 AK9Q5TCS8 1911 aa21.52■■□□□ 1.03
CDK5R1-201ENST00000313401 MICU3Q86XE3 530 aa21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 MROH1Q8NDA8 1641 aa21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 IFIT5Q13325 482 aaKnown RBP21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 TNNI3KQ59H18 835 aa21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 TTC6Q86TZ1 520 aa21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 PAG1Q9NWQ8 432 aa21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 FPGT-TNNI3KV9GXZ4 949 aa21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 A1BGP04217 495 aa21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 OLFM4Q6UX06 510 aa21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 LDHAL6AQ6ZMR3 332 aa21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 CCDC34Q96HJ3 373 aa21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 V9GYY5 206 aaPredicted RBP21.51■■□□□ 1.03
CDK5R1-201ENST00000313401 COL3A1P02461 1466 aaPredicted RBP21.5■■□□□ 1.03
CDK5R1-201ENST00000313401 RGS12O14924 1447 aa21.5■■□□□ 1.03
CDK5R1-201ENST00000313401 KLF18A0A0U1RQI7 1052 aa21.5■■□□□ 1.03
CDK5R1-201ENST00000313401 ZNF213O14771 459 aa21.5■■□□□ 1.03
CDK5R1-201ENST00000313401 NPHP3Q7Z494 1330 aa21.5■■□□□ 1.03
CDK5R1-201ENST00000313401 DYNC1I1O14576 645 aa21.5■■□□□ 1.03
CDK5R1-201ENST00000313401 ZNF589Q86UQ0 364 aaPredicted RBP21.49■■□□□ 1.03
CDK5R1-201ENST00000313401 BABAM1Q9NWV8 329 aa21.49■■□□□ 1.03
CDK5R1-201ENST00000313401 PTPDC1A2A3K4 754 aa21.49■■□□□ 1.03
CDK5R1-201ENST00000313401 A0A087WWV3 80 aa21.49■■□□□ 1.03
CDK5R1-201ENST00000313401 HOXB7P09629 217 aa21.49■■□□□ 1.03
CDK5R1-201ENST00000313401 MARCKSP29966 332 aaPredicted RBP21.49■■□□□ 1.03
CDK5R1-201ENST00000313401 MNS1Q8NEH6 495 aa21.49■■□□□ 1.03
CDK5R1-201ENST00000313401 ABCF2Q9UG63 623 aa21.49■■□□□ 1.03
CDK5R1-201ENST00000313401 DEPDC5O75140 1603 aa21.49■■□□□ 1.03
CDK5R1-201ENST00000313401 DIP2CQ9Y2E4 1556 aa21.49■■□□□ 1.03
CDK5R1-201ENST00000313401 PPP4R3BQ5MIZ7 849 aa21.48■■□□□ 1.03
CDK5R1-201ENST00000313401 MPHOSPH8Q99549 860 aa21.48■■□□□ 1.03
CDK5R1-201ENST00000313401 METTL22Q9BUU2 404 aaPredicted RBP21.48■■□□□ 1.03
CDK5R1-201ENST00000313401 ANO10Q9NW15 660 aa21.48■■□□□ 1.03
CDK5R1-201ENST00000313401 NEURL1BA8MQ27 555 aa21.48■■□□□ 1.03
CDK5R1-201ENST00000313401 SLFNL1Q499Z3 407 aa21.48■■□□□ 1.03
CDK5R1-201ENST00000313401 AIDAQ96BJ3 306 aa21.48■■□□□ 1.03
CDK5R1-201ENST00000313401 IGSF3O75054 1194 aa21.47■■□□□ 1.03
CDK5R1-201ENST00000313401 HMGB1P09429 215 aaKnown RBP21.47■■□□□ 1.03
CDK5R1-201ENST00000313401 HELBQ8NG08 1087 aaPredicted RBP21.47■■□□□ 1.03
CDK5R1-201ENST00000313401 TMOD3Q9NYL9 352 aa21.47■■□□□ 1.03
CDK5R1-201ENST00000313401 CYP2E1P05181 493 aaPredicted RBP21.47■■□□□ 1.03
CDK5R1-201ENST00000313401 TMX1Q9H3N1 280 aa21.47■■□□□ 1.03
CDK5R1-201ENST00000313401 PTPN14Q15678 1187 aa21.47■■□□□ 1.03
CDK5R1-201ENST00000313401 CFAP100Q494V2 611 aa21.47■■□□□ 1.03
CDK5R1-201ENST00000313401 TDO2P48775 406 aa21.46■■□□□ 1.03
CDK5R1-201ENST00000313401 LEO1Q8WVC0 666 aaPredicted RBP21.46■■□□□ 1.03
CDK5R1-201ENST00000313401 ZSWIM6Q9HCJ5 1215 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms