RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 TTLL11Q8NHH1 800 aa23.36■■□□□ 1.33
CDK4-202ENST00000312990 SSH3Q8TE77 659 aa23.36■■□□□ 1.33
CDK4-202ENST00000312990 MTFR1LQ9H019 292 aa23.36■■□□□ 1.33
CDK4-202ENST00000312990 POLA2Q14181 598 aa23.35■■□□□ 1.33
CDK4-202ENST00000312990 COL4A1P02462 1669 aa23.35■■□□□ 1.33
CDK4-202ENST00000312990 HSP90B1P14625 803 aaKnown RBP23.35■■□□□ 1.33
CDK4-202ENST00000312990 ST5P78524 1137 aa23.34■■□□□ 1.33
CDK4-202ENST00000312990 CCDC85AQ96PX6 553 aaPredicted RBP23.34■■□□□ 1.33
CDK4-202ENST00000312990 FAM161AQ3B820 660 aa23.33■■□□□ 1.33
CDK4-202ENST00000312990 KDM2BQ8NHM5 1336 aa23.33■■□□□ 1.33
CDK4-202ENST00000312990 CACNA1SQ13698 1873 aa23.33■■□□□ 1.33
CDK4-202ENST00000312990 HMMRO75330 724 aa23.32■■□□□ 1.32
CDK4-202ENST00000312990 RFX5P48382 616 aaPredicted RBP23.32■■□□□ 1.32
CDK4-202ENST00000312990 RWDD1Q9H446 243 aaPredicted RBP23.32■■□□□ 1.32
CDK4-202ENST00000312990 GREM2Q9H772 168 aa23.32■■□□□ 1.32
CDK4-202ENST00000312990 ATF5Q9Y2D1 282 aaPredicted RBP23.32■■□□□ 1.32
CDK4-202ENST00000312990 CHMP3Q9Y3E7 222 aa23.32■■□□□ 1.32
CDK4-202ENST00000312990 SOCS7O14512 581 aa23.32■■□□□ 1.32
CDK4-202ENST00000312990 SF3B3Q15393 1217 aaKnown RBP23.32■■□□□ 1.32
CDK4-202ENST00000312990 GOLGB1Q14789 3259 aaKnown RBP23.31■■□□□ 1.32
CDK4-202ENST00000312990 NLRP3Q96P20 1036 aa23.31■■□□□ 1.32
CDK4-202ENST00000312990 SRCAPQ6ZRS2 3230 aa23.31■■□□□ 1.32
CDK4-202ENST00000312990 RTL9Q8NET4 1388 aa23.31■■□□□ 1.32
CDK4-202ENST00000312990 LRP5O75197 1615 aa23.3■■□□□ 1.32
CDK4-202ENST00000312990 DLEC1Q9Y238 1755 aa23.3■■□□□ 1.32
CDK4-202ENST00000312990 A0A1B0GUL6 1792 aa23.3■■□□□ 1.32
CDK4-202ENST00000312990 CCDC152Q4G0S7 254 aa23.29■■□□□ 1.32
CDK4-202ENST00000312990 KLHDC4Q8TBB5 520 aa23.29■■□□□ 1.32
CDK4-202ENST00000312990 SGIP1Q9BQI5 828 aa23.29■■□□□ 1.32
CDK4-202ENST00000312990 C10orf71Q711Q0 1435 aa23.29■■□□□ 1.32
CDK4-202ENST00000312990 ITGA6P23229 1130 aa23.28■■□□□ 1.32
CDK4-202ENST00000312990 PTPN12Q05209 780 aaKnown RBP23.28■■□□□ 1.32
CDK4-202ENST00000312990 BRIP1Q9BX63 1249 aa23.28■■□□□ 1.32
CDK4-202ENST00000312990 PA2G4Q9UQ80 394 aaKnown RBP23.28■■□□□ 1.32
CDK4-202ENST00000312990 KIAA1551Q9HCM1 1747 aa23.28■■□□□ 1.32
CDK4-202ENST00000312990 KLRG2A4D1S0 409 aaPredicted RBP23.28■■□□□ 1.32
CDK4-202ENST00000312990 CRY2Q49AN0 593 aa23.28■■□□□ 1.32
CDK4-202ENST00000312990 DCTPP1Q9H773 170 aa23.28■■□□□ 1.32
CDK4-202ENST00000312990 IFIT5Q13325 482 aaKnown RBP23.27■■□□□ 1.32
CDK4-202ENST00000312990 CCDC57Q2TAC2 916 aa23.27■■□□□ 1.32
CDK4-202ENST00000312990 COPRSQ9NQ92 184 aa23.27■■□□□ 1.32
CDK4-202ENST00000312990 SEC31BQ9NQW1 1179 aa23.27■■□□□ 1.32
CDK4-202ENST00000312990 SMC5Q8IY18 1101 aa23.26■■□□□ 1.31
CDK4-202ENST00000312990 ZNF594Q96JF6 807 aaPredicted RBP23.26■■□□□ 1.31
CDK4-202ENST00000312990 EXOC6BQ9Y2D4 811 aa23.26■■□□□ 1.31
CDK4-202ENST00000312990 PTGER2P43116 358 aa23.25■■□□□ 1.31
CDK4-202ENST00000312990 CENPQQ7L2Z9 268 aaPredicted RBP23.25■■□□□ 1.31
CDK4-202ENST00000312990 ANKRD18BA2A2Z9 1011 aa23.25■■□□□ 1.31
CDK4-202ENST00000312990 POLD1P28340 1107 aa23.25■■□□□ 1.31
CDK4-202ENST00000312990 NOP58Q9Y2X3 529 aaKnown RBP23.25■■□□□ 1.31
CDK4-202ENST00000312990 SURF6O75683 361 aaKnown RBP23.24■■□□□ 1.31
CDK4-202ENST00000312990 GCC1Q96CN9 775 aa23.24■■□□□ 1.31
CDK4-202ENST00000312990 BRCA1P38398 1863 aaKnown RBP23.24■■□□□ 1.31
CDK4-202ENST00000312990 SIL1Q9H173 461 aa23.23■■□□□ 1.31
CDK4-202ENST00000312990 PDE6BP35913 854 aa23.22■■□□□ 1.31
CDK4-202ENST00000312990 CELF1Q92879 486 aaKnown RBP23.21■■□□□ 1.31
CDK4-202ENST00000312990 PUS3Q9BZE2 481 aaKnown RBP23.21■■□□□ 1.31
CDK4-202ENST00000312990 SRGNP10124 158 aa23.2■■□□□ 1.3
CDK4-202ENST00000312990 TAF7LQ5H9L4 462 aa23.2■■□□□ 1.3
CDK4-202ENST00000312990 DDX46Q7L014 1031 aaKnown RBP23.2■■□□□ 1.3
CDK4-202ENST00000312990 RPGRQ92834 1020 aaKnown RBP23.2■■□□□ 1.3
CDK4-202ENST00000312990 SLX4Q8IY92 1834 aa23.2■■□□□ 1.3
CDK4-202ENST00000312990 HOXA10P31260 410 aaPredicted RBP23.19■■□□□ 1.3
CDK4-202ENST00000312990 LRRC24Q50LG9 513 aa23.19■■□□□ 1.3
CDK4-202ENST00000312990 ATG9AQ7Z3C6 839 aa23.19■■□□□ 1.3
CDK4-202ENST00000312990 CDC5LQ99459 802 aaKnown RBP23.19■■□□□ 1.3
CDK4-202ENST00000312990 LRRC37AA6NMS7 1700 aa23.19■■□□□ 1.3
CDK4-202ENST00000312990 EYA2O00167 538 aa23.19■■□□□ 1.3
CDK4-202ENST00000312990 APBB1O00213 710 aa23.19■■□□□ 1.3
CDK4-202ENST00000312990 SPON1Q9HCB6 807 aa23.19■■□□□ 1.3
CDK4-202ENST00000312990 G3BP1Q13283 466 aaKnown RBP eCLIP23.18■■□□□ 1.34e-8■□□□□ 10.3
CDK4-202ENST00000312990 CIAO1O76071 339 aa23.17■■□□□ 1.3
CDK4-202ENST00000312990 SASH1O94885 1247 aa23.17■■□□□ 1.3
CDK4-202ENST00000312990 GRAPQ13588 217 aa23.17■■□□□ 1.3
CDK4-202ENST00000312990 HSP90AB4PQ58FF6 505 aa23.17■■□□□ 1.3
CDK4-202ENST00000312990 LDHAL6AQ6ZMR3 332 aa23.17■■□□□ 1.3
CDK4-202ENST00000312990 C2CD5Q86YS7 1000 aa23.17■■□□□ 1.3
CDK4-202ENST00000312990 GRAPLQ8TC17 118 aaPredicted RBP23.17■■□□□ 1.3
CDK4-202ENST00000312990 FBXO3Q9UK99 471 aa23.17■■□□□ 1.3
CDK4-202ENST00000312990 RAB11FIP3O75154 756 aa23.16■■□□□ 1.3
CDK4-202ENST00000312990 NPR1P16066 1061 aa23.16■■□□□ 1.3
CDK4-202ENST00000312990 CHRNA5P30532 468 aa23.16■■□□□ 1.3
CDK4-202ENST00000312990 IGHMBP2P38935 993 aaKnown RBP23.16■■□□□ 1.3
CDK4-202ENST00000312990 OS9Q13438 667 aaPredicted RBP23.16■■□□□ 1.3
CDK4-202ENST00000312990 ANKRD18AQ8IVF6 992 aa23.16■■□□□ 1.3
CDK4-202ENST00000312990 RBM17Q96I25 401 aaKnown RBP23.16■■□□□ 1.3
CDK4-202ENST00000312990 RIPOR2Q9Y4F9 1068 aa23.16■■□□□ 1.3
CDK4-202ENST00000312990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.16■■□□□ 1.3
CDK4-202ENST00000312990 RPS8P62241 208 aaKnown RBP23.16■■□□□ 1.3
CDK4-202ENST00000312990 NUCB1Q02818 461 aa23.16■■□□□ 1.3
CDK4-202ENST00000312990 RHPN1Q8TCX5 695 aa23.16■■□□□ 1.3
CDK4-202ENST00000312990 MASTLQ96GX5 879 aa23.16■■□□□ 1.3
CDK4-202ENST00000312990 CRAMP1Q96RY5 1269 aa23.16■■□□□ 1.3
CDK4-202ENST00000312990 H0YIN7 160 aa23.15■■□□□ 1.3
CDK4-202ENST00000312990 SMARCA5O60264 1052 aaPredicted RBP23.15■■□□□ 1.3
CDK4-202ENST00000312990 IL15P40933 162 aaPredicted RBP23.15■■□□□ 1.3
CDK4-202ENST00000312990 ANKRD45Q5TZF3 282 aa23.15■■□□□ 1.3
CDK4-202ENST00000312990 MPHOSPH8Q99549 860 aa23.15■■□□□ 1.3
CDK4-202ENST00000312990 LRRCC1Q9C099 1032 aa23.15■■□□□ 1.3
CDK4-202ENST00000312990 PDZRN3Q9UPQ7 1066 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms