RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 FEZ1Q99689 392 aa11.34□□□□□ -0.59
RBFOX1-201ENST00000311745 PRDM16Q9HAZ2 1276 aa11.34□□□□□ -0.59
RBFOX1-201ENST00000311745 CCDC39Q9UFE4 941 aa11.34□□□□□ -0.59
RBFOX1-201ENST00000311745 SOS2Q07890 1332 aaPredicted RBP11.34□□□□□ -0.59
RBFOX1-201ENST00000311745 HS1BP3Q53T59 392 aa11.34□□□□□ -0.59
RBFOX1-201ENST00000311745 RHPN1Q8TCX5 695 aa11.34□□□□□ -0.59
RBFOX1-201ENST00000311745 IL1RAPL2Q9NP60 686 aa11.34□□□□□ -0.59
RBFOX1-201ENST00000311745 TNS2Q63HR2 1409 aa11.33□□□□□ -0.59
RBFOX1-201ENST00000311745 NBPF20Q3BBV1 942 aa11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 C1orf141Q5JVX7 400 aa11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 ZNF513Q8N8E2 541 aaPredicted RBP11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 ZDHHC9Q9Y397 364 aa11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 NOP2P46087 812 aaKnown RBP11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 BIRC2Q13490 618 aa11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 PKP1Q13835 747 aa11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 LMOD2Q6P5Q4 547 aa11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 NUTM1Q86Y26 1132 aa11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 NFATC2IPQ8NCF5 419 aa11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 RNF214Q8ND24 703 aa11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 ERC2O15083 957 aa11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 E2F4Q16254 413 aa11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 SUCLG2Q96I99 432 aa11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 DDX21Q9NR30 783 aaKnown RBP eCLIP11.33□□□□□ -0.6
RBFOX1-201ENST00000311745 ATF3P18847 181 aa11.32□□□□□ -0.6
RBFOX1-201ENST00000311745 RABEP1Q15276 862 aa11.32□□□□□ -0.6
RBFOX1-201ENST00000311745 SKOR2Q2VWA4 1001 aaPredicted RBP11.32□□□□□ -0.6
RBFOX1-201ENST00000311745 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
RBFOX1-201ENST00000311745 ALDH1L1O75891 902 aa11.32□□□□□ -0.6
RBFOX1-201ENST00000311745 CHAF1AQ13111 956 aaPredicted RBP11.32□□□□□ -0.6
RBFOX1-201ENST00000311745 EPHA10Q5JZY3 1008 aa11.32□□□□□ -0.6
RBFOX1-201ENST00000311745 COL22A1Q8NFW1 1626 aaPredicted RBP11.32□□□□□ -0.6
RBFOX1-201ENST00000311745 NOL10Q9BSC4 688 aaKnown RBP11.32□□□□□ -0.6
RBFOX1-201ENST00000311745 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
RBFOX1-201ENST00000311745 SRGAP3O43295 1099 aa11.31□□□□□ -0.6
RBFOX1-201ENST00000311745 RAB11FIP3O75154 756 aa11.31□□□□□ -0.6
RBFOX1-201ENST00000311745 TRIM66O15016 1216 aa11.31□□□□□ -0.6
RBFOX1-201ENST00000311745 SASH1O94885 1247 aa11.31□□□□□ -0.6
RBFOX1-201ENST00000311745 CASP7P55210 303 aa11.31□□□□□ -0.6
RBFOX1-201ENST00000311745 CEP120Q8N960 986 aa11.31□□□□□ -0.6
RBFOX1-201ENST00000311745 USP16Q9Y5T5 823 aa11.31□□□□□ -0.6
RBFOX1-201ENST00000311745 COL15A1P39059 1388 aa11.31□□□□□ -0.6
RBFOX1-201ENST00000311745 SSFA2P28290 1259 aa11.31□□□□□ -0.6
RBFOX1-201ENST00000311745 CAVIN1Q6NZI2 390 aaKnown RBP11.31□□□□□ -0.6
RBFOX1-201ENST00000311745 CADPS2Q86UW7 1296 aa11.31□□□□□ -0.6
RBFOX1-201ENST00000311745 PA2G4Q9UQ80 394 aaKnown RBP11.31□□□□□ -0.6
RBFOX1-201ENST00000311745 MPHOSPH10O00566 681 aaKnown RBP11.3□□□□□ -0.6
RBFOX1-201ENST00000311745 ANAPC15P60006 121 aa11.3□□□□□ -0.6
RBFOX1-201ENST00000311745 PPP2R5AQ15172 486 aa11.3□□□□□ -0.6
RBFOX1-201ENST00000311745 ZGPATQ8N5A5 531 aaKnown RBP11.3□□□□□ -0.6
RBFOX1-201ENST00000311745 RBSNQ9H1K0 784 aa11.3□□□□□ -0.6
RBFOX1-201ENST00000311745 SUFUQ9UMX1 484 aa11.3□□□□□ -0.6
RBFOX1-201ENST00000311745 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
RBFOX1-201ENST00000311745 MCM5P33992 734 aa11.3□□□□□ -0.6
RBFOX1-201ENST00000311745 HYPKQ9NX55 129 aa11.3□□□□□ -0.6
RBFOX1-201ENST00000311745 ZNF335Q9H4Z2 1342 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 GOLGA6L22H0YM25 854 aa11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 RFX5P48382 616 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 NEURL1BA8MQ27 555 aa11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 SURF6O75683 361 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 LSG1Q9H089 658 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 BICC1Q9H694 974 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 NLRP2Q9NX02 1062 aa11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 ANKRD36CQ5JPF3 1778 aa11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 MAP4K4O95819 1239 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 PIP4K2AP48426 406 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 COL9A3Q14050 684 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 LRCH2Q5VUJ6 765 aa11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 LINS1Q8NG48 757 aa11.29□□□□□ -0.6
RBFOX1-201ENST00000311745 NRAPQ86VF7 1730 aa11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 NBPF26B4DH59 902 aa11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 GUCY2CP25092 1073 aa11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 NOLC1Q14978 699 aaKnown RBP eCLIP11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 NBPF14Q5TI25 921 aa11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 NBPF10Q6P3W6 841 aaKnown RBP11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 NBPF15Q8N660 670 aa11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 DDX60Q8IY21 1712 aaKnown RBP11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 WDR17Q8IZU2 1322 aa11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 IFNL2Q8IZJ0 200 aa11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 KIF1BPQ96EK5 621 aa11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 DCAF5Q96JK2 942 aa11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 JCADQ9P266 1359 aa11.28□□□□□ -0.6
RBFOX1-201ENST00000311745 GRM8O00222 908 aa11.27□□□□□ -0.6
RBFOX1-201ENST00000311745 NKX1-1Q15270 411 aaPredicted RBP11.27□□□□□ -0.6
RBFOX1-201ENST00000311745 ST7Q9NRC1 585 aa11.27□□□□□ -0.6
RBFOX1-201ENST00000311745 TLR7Q9NYK1 1049 aaKnown RBP11.27□□□□□ -0.6
RBFOX1-201ENST00000311745 TCHHQ07283 1943 aa11.27□□□□□ -0.61
RBFOX1-201ENST00000311745 SGSM2O43147 1006 aa11.27□□□□□ -0.61
RBFOX1-201ENST00000311745 HSP90AB1P08238 724 aaKnown RBP11.27□□□□□ -0.61
RBFOX1-201ENST00000311745 TATP17735 454 aaPredicted RBP11.27□□□□□ -0.61
RBFOX1-201ENST00000311745 HSPA4P34932 840 aa11.27□□□□□ -0.61
RBFOX1-201ENST00000311745 XAGE3Q8WTP9 111 aa11.27□□□□□ -0.61
RBFOX1-201ENST00000311745 DEF6Q9H4E7 631 aa11.27□□□□□ -0.61
RBFOX1-201ENST00000311745 CXorf56Q9H5V9 222 aa11.27□□□□□ -0.61
RBFOX1-201ENST00000311745 DISP2A7MBM2 1401 aa11.27□□□□□ -0.61
RBFOX1-201ENST00000311745 SSR1P43307 286 aaKnown RBP11.27□□□□□ -0.61
RBFOX1-201ENST00000311745 CUL4AQ13619 759 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms