RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 CDCA7Q9BWT1 371 aaPredicted RBP27.53■■■□□ 2
CTSF-201ENST00000310325 ZSWIM6Q9HCJ5 1215 aa27.53■■■□□ 2
CTSF-201ENST00000310325 LRRC24Q50LG9 513 aa27.52■■■□□ 2
CTSF-201ENST00000310325 RUFY3Q7L099 469 aa27.52■■■□□ 2
CTSF-201ENST00000310325 KLHL40Q2TBA0 621 aa27.51■■■□□ 2
CTSF-201ENST00000310325 VPS53Q5VIR6 699 aa27.51■■■□□ 2
CTSF-201ENST00000310325 SYTL4Q96C24 671 aaPredicted RBP27.51■■■□□ 2
CTSF-201ENST00000310325 PLA2G12BQ9BX93 195 aa27.51■■■□□ 2
CTSF-201ENST00000310325 BRPF3Q9ULD4 1205 aa27.51■■■□□ 2
CTSF-201ENST00000310325 CYP46A1Q9Y6A2 500 aa27.51■■■□□ 2
CTSF-201ENST00000310325 CPA1P15085 419 aa27.51■■□□□ 1.99
CTSF-201ENST00000310325 ZNF589Q86UQ0 364 aaPredicted RBP27.51■■□□□ 1.99
CTSF-201ENST00000310325 NEUROD6Q96NK8 337 aa27.51■■□□□ 1.99
CTSF-201ENST00000310325 CCDC57Q2TAC2 916 aa27.5■■□□□ 1.99
CTSF-201ENST00000310325 ZBTB38Q8NAP3 1195 aaPredicted RBP27.5■■□□□ 1.99
CTSF-201ENST00000310325 ARXQ96QS3 562 aa27.5■■□□□ 1.99
CTSF-201ENST00000310325 NDUFB9Q9Y6M9 179 aa27.5■■□□□ 1.99
CTSF-201ENST00000310325 SLC27A2O14975 620 aa27.5■■□□□ 1.99
CTSF-201ENST00000310325 RNF20Q5VTR2 975 aa27.5■■□□□ 1.99
CTSF-201ENST00000310325 PDRG1Q9NUG6 133 aa27.5■■□□□ 1.99
CTSF-201ENST00000310325 LMBRD1Q9NUN5 540 aa27.5■■□□□ 1.99
CTSF-201ENST00000310325 ISY1Q9ULR0 285 aaKnown RBP27.5■■□□□ 1.99
CTSF-201ENST00000310325 DDX49Q9Y6V7 483 aaKnown RBP27.5■■□□□ 1.99
CTSF-201ENST00000310325 RPAP1Q9BWH6 1393 aaPredicted RBP27.49■■□□□ 1.99
CTSF-201ENST00000310325 HSP90AB3PQ58FF7 597 aa27.49■■□□□ 1.99
CTSF-201ENST00000310325 FBXO3Q9UK99 471 aa27.49■■□□□ 1.99
CTSF-201ENST00000310325 THRAP3Q9Y2W1 955 aaKnown RBP27.49■■□□□ 1.99
CTSF-201ENST00000310325 SPATA31A1Q5TZJ5 1347 aa27.49■■□□□ 1.99
CTSF-201ENST00000310325 NUP98P52948 1817 aa27.48■■□□□ 1.99
CTSF-201ENST00000310325 ADAMTS2O95450 1211 aa27.48■■□□□ 1.99
CTSF-201ENST00000310325 FAM89AQ96GI7 184 aa27.48■■□□□ 1.99
CTSF-201ENST00000310325 PRIM1P49642 420 aaKnown RBP27.48■■□□□ 1.99
CTSF-201ENST00000310325 TIMM10P62072 90 aa27.48■■□□□ 1.99
CTSF-201ENST00000310325 PUS3Q9BZE2 481 aaKnown RBP27.48■■□□□ 1.99
CTSF-201ENST00000310325 ZBTB1Q9Y2K1 713 aa27.48■■□□□ 1.99
CTSF-201ENST00000310325 CDHR2Q9BYE9 1310 aa27.48■■□□□ 1.99
CTSF-201ENST00000310325 PALLDQ8WX93 1383 aa27.48■■□□□ 1.99
CTSF-201ENST00000310325 TAF5LO75529 589 aa27.47■■□□□ 1.99
CTSF-201ENST00000310325 HLFQ16534 295 aa27.47■■□□□ 1.99
CTSF-201ENST00000310325 KBTBD3Q8NAB2 608 aa27.47■■□□□ 1.99
CTSF-201ENST00000310325 SPEF2Q9C093 1822 aa27.47■■□□□ 1.99
CTSF-201ENST00000310325 PSMA5P28066 241 aa27.46■■□□□ 1.99
CTSF-201ENST00000310325 DDX46Q7L014 1031 aaKnown RBP27.46■■□□□ 1.99
CTSF-201ENST00000310325 CCDC9Q9Y3X0 531 aaKnown RBP27.46■■□□□ 1.99
CTSF-201ENST00000310325 MYH3P11055 1940 aa27.46■■□□□ 1.99
CTSF-201ENST00000310325 CSF1RP07333 972 aa27.46■■□□□ 1.99
CTSF-201ENST00000310325 FOXD4L5Q5VV16 416 aaPredicted RBP27.46■■□□□ 1.99
CTSF-201ENST00000310325 FOXD4L4Q8WXT5 416 aaPredicted RBP27.46■■□□□ 1.99
CTSF-201ENST00000310325 HMG20BQ9P0W2 317 aa27.46■■□□□ 1.99
CTSF-201ENST00000310325 A0A1B0GUL7 405 aa27.45■■□□□ 1.99
CTSF-201ENST00000310325 NLRP10Q86W26 655 aa27.45■■□□□ 1.99
CTSF-201ENST00000310325 ZSCAN31Q96LW9 406 aaPredicted RBP27.45■■□□□ 1.99
CTSF-201ENST00000310325 CEP126Q9P2H0 1117 aa27.45■■□□□ 1.99
CTSF-201ENST00000310325 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.45■■□□□ 1.99
CTSF-201ENST00000310325 DDB1Q16531 1140 aa27.45■■□□□ 1.98
CTSF-201ENST00000310325 PAG1Q9NWQ8 432 aa27.45■■□□□ 1.98
CTSF-201ENST00000310325 USPL1Q5W0Q7 1092 aa27.44■■□□□ 1.98
CTSF-201ENST00000310325 TICAM2Q86XR7 235 aa27.44■■□□□ 1.98
CTSF-201ENST00000310325 LARP6Q9BRS8 491 aaKnown RBP27.44■■□□□ 1.98
CTSF-201ENST00000310325 SH2B1Q9NRF2 756 aaPredicted RBP27.44■■□□□ 1.98
CTSF-201ENST00000310325 NWD2Q9ULI1 1742 aa27.44■■□□□ 1.98
CTSF-201ENST00000310325 WDR33Q9C0J8 1336 aaKnown RBP27.43■■□□□ 1.98
CTSF-201ENST00000310325 GPTP24298 496 aa27.43■■□□□ 1.98
CTSF-201ENST00000310325 IL6STP40189 918 aaPredicted RBP27.43■■□□□ 1.98
CTSF-201ENST00000310325 SH3TC1Q8TE82 1336 aa27.43■■□□□ 1.98
CTSF-201ENST00000310325 LARGE1O95461 756 aa27.43■■□□□ 1.98
CTSF-201ENST00000310325 XRCC6P12956 609 aaKnown RBP eCLIP27.43■■□□□ 1.98
CTSF-201ENST00000310325 MRE11P49959 708 aa27.43■■□□□ 1.98
CTSF-201ENST00000310325 TSGA10IPQ3SY00 556 aa27.43■■□□□ 1.98
CTSF-201ENST00000310325 MCMDC2Q4G0Z9 681 aa27.43■■□□□ 1.98
CTSF-201ENST00000310325 GOLIM4O00461 696 aa27.42■■□□□ 1.98
CTSF-201ENST00000310325 IFIT5Q13325 482 aaKnown RBP27.42■■□□□ 1.98
CTSF-201ENST00000310325 PRPF40AO75400 957 aaKnown RBP27.41■■□□□ 1.98
CTSF-201ENST00000310325 TAF7LQ5H9L4 462 aa27.41■■□□□ 1.98
CTSF-201ENST00000310325 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.41■■□□□ 1.98
CTSF-201ENST00000310325 AKAP2Q9Y2D5 859 aa27.41■■□□□ 1.98
CTSF-201ENST00000310325 ERVV-1B6SEH8 477 aa27.41■■□□□ 1.98
CTSF-201ENST00000310325 IFIT1P09914 478 aaKnown RBP27.41■■□□□ 1.98
CTSF-201ENST00000310325 BLOC1S2Q6QNY1 142 aa27.4■■□□□ 1.98
CTSF-201ENST00000310325 CCDC85AQ96PX6 553 aaPredicted RBP27.4■■□□□ 1.98
CTSF-201ENST00000310325 SEC62Q99442 399 aaKnown RBP27.4■■□□□ 1.98
CTSF-201ENST00000310325 CHGBP05060 677 aa27.4■■□□□ 1.98
CTSF-201ENST00000310325 DZIP3Q86Y13 1208 aaKnown RBP27.4■■□□□ 1.98
CTSF-201ENST00000310325 CHAMP1Q96JM3 812 aa27.4■■□□□ 1.98
CTSF-201ENST00000310325 SMC3Q9UQE7 1217 aa27.4■■□□□ 1.98
CTSF-201ENST00000310325 CCDC129Q6ZRS4 1044 aa27.39■■□□□ 1.98
CTSF-201ENST00000310325 SYNE4Q8N205 404 aa27.39■■□□□ 1.98
CTSF-201ENST00000310325 U3KPZ7 1027 aaPredicted RBP27.39■■□□□ 1.98
CTSF-201ENST00000310325 SPATA31A5Q5VU36 1347 aa27.39■■□□□ 1.97
CTSF-201ENST00000310325 SPATA31A7Q8IWB4 1347 aa27.39■■□□□ 1.97
CTSF-201ENST00000310325 KRT32Q14532 448 aa27.38■■□□□ 1.97
CTSF-201ENST00000310325 ALDH8A1Q9H2A2 487 aaPredicted RBP27.38■■□□□ 1.97
CTSF-201ENST00000310325 GRPEL1Q9HAV7 217 aa27.38■■□□□ 1.97
CTSF-201ENST00000310325 HELLSQ9NRZ9 838 aa27.38■■□□□ 1.97
CTSF-201ENST00000310325 TAF6LQ9Y6J9 622 aa27.38■■□□□ 1.97
CTSF-201ENST00000310325 RPS6KB1P23443 525 aa27.38■■□□□ 1.97
CTSF-201ENST00000310325 CCDC83Q8IWF9 413 aa27.38■■□□□ 1.97
CTSF-201ENST00000310325 TTLL11Q8NHH1 800 aa27.38■■□□□ 1.97
CTSF-201ENST00000310325 CICQ96RK0 1608 aaPredicted RBP27.37■■□□□ 1.97
CTSF-201ENST00000310325 CTSWP56202 376 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms