RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 BAZ1AQ9NRL2 1556 aaPredicted RBP15.23■□□□□ 0.03
TRIM56-201ENST00000306085 RASA3Q14644 834 aa15.23■□□□□ 0.03
TRIM56-201ENST00000306085 MVPQ14764 893 aaKnown RBP15.23■□□□□ 0.03
TRIM56-201ENST00000306085 TTF1Q15361 905 aaPredicted RBP15.23■□□□□ 0.03
TRIM56-201ENST00000306085 PRIMPOLQ96LW4 560 aa15.23■□□□□ 0.03
TRIM56-201ENST00000306085 ZMAT2Q96NC0 199 aaKnown RBP15.23■□□□□ 0.03
TRIM56-201ENST00000306085 RAB11FIP3O75154 756 aa15.23■□□□□ 0.03
TRIM56-201ENST00000306085 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.22■□□□□ 0.03
TRIM56-201ENST00000306085 HMGB1P09429 215 aaKnown RBP15.22■□□□□ 0.03
TRIM56-201ENST00000306085 ARHGEF2Q92974 986 aaKnown RBP15.22■□□□□ 0.03
TRIM56-201ENST00000306085 PPANQ9NQ55 473 aaKnown RBP15.22■□□□□ 0.03
TRIM56-201ENST00000306085 TXNDC9O14530 226 aa15.22■□□□□ 0.03
TRIM56-201ENST00000306085 TSNAXIP1Q2TAA8 658 aa15.22■□□□□ 0.03
TRIM56-201ENST00000306085 SDCCAG8Q86SQ7 713 aaPredicted RBP15.22■□□□□ 0.03
TRIM56-201ENST00000306085 VIMP08670 466 aaKnown RBP15.22■□□□□ 0.03
TRIM56-201ENST00000306085 HPDP32754 393 aaPredicted RBP15.22■□□□□ 0.03
TRIM56-201ENST00000306085 ERCC6LQ2NKX8 1250 aa15.22■□□□□ 0.03
TRIM56-201ENST00000306085 SLC4A8Q2Y0W8 1093 aa15.22■□□□□ 0.03
TRIM56-201ENST00000306085 CXorf38Q8TB03 319 aa15.22■□□□□ 0.03
TRIM56-201ENST00000306085 MAK16Q9BXY0 300 aaKnown RBP15.22■□□□□ 0.03
TRIM56-201ENST00000306085 FAM76AQ8TAV0 307 aa15.22■□□□□ 0.03
TRIM56-201ENST00000306085 VCXQ9H320 206 aa15.22■□□□□ 0.03
TRIM56-201ENST00000306085 TATP17735 454 aaPredicted RBP15.22■□□□□ 0.03
TRIM56-201ENST00000306085 NAA16Q6N069 864 aaPredicted RBP15.22■□□□□ 0.03
TRIM56-201ENST00000306085 NBPF11Q86T75 865 aa15.22■□□□□ 0.03
TRIM56-201ENST00000306085 IQCA1Q86XH1 822 aa15.22■□□□□ 0.03
TRIM56-201ENST00000306085 ZNF444Q8N0Y2 327 aaPredicted RBP15.22■□□□□ 0.03
TRIM56-201ENST00000306085 SPAG5Q96R06 1193 aa15.22■□□□□ 0.03
TRIM56-201ENST00000306085 IRX5P78411 483 aaPredicted RBP15.21■□□□□ 0.03
TRIM56-201ENST00000306085 JAKMIP2Q96AA8 810 aa15.21■□□□□ 0.03
TRIM56-201ENST00000306085 RASSF4Q9H2L5 321 aa15.21■□□□□ 0.03
TRIM56-201ENST00000306085 UBASH3AP57075 661 aa15.21■□□□□ 0.03
TRIM56-201ENST00000306085 SOGA1O94964 1423 aa15.21■□□□□ 0.03
TRIM56-201ENST00000306085 SH2B1Q9NRF2 756 aaPredicted RBP15.21■□□□□ 0.03
TRIM56-201ENST00000306085 PIP4K2BP78356 416 aa15.21■□□□□ 0.03
TRIM56-201ENST00000306085 PROCA1Q8NCQ7 364 aaPredicted RBP15.21■□□□□ 0.03
TRIM56-201ENST00000306085 AKAP2Q9Y2D5 859 aa15.21■□□□□ 0.02
TRIM56-201ENST00000306085 TLDC2A0PJX2 215 aa15.21■□□□□ 0.02
TRIM56-201ENST00000306085 RUFY3Q7L099 469 aa15.21■□□□□ 0.02
TRIM56-201ENST00000306085 VAT1LQ9HCJ6 419 aa15.21■□□□□ 0.02
TRIM56-201ENST00000306085 DNAI1Q9UI46 699 aa15.21■□□□□ 0.02
TRIM56-201ENST00000306085 HGSO14964 777 aaPredicted RBP15.2■□□□□ 0.02
TRIM56-201ENST00000306085 TMEM57Q8N5G2 664 aa15.2■□□□□ 0.02
TRIM56-201ENST00000306085 CYLC1P35663 651 aaPredicted RBP15.2■□□□□ 0.02
TRIM56-201ENST00000306085 ZNF131P52739 623 aa15.2■□□□□ 0.02
TRIM56-201ENST00000306085 CAVIN4Q5BKX8 364 aa15.2■□□□□ 0.02
TRIM56-201ENST00000306085 FYB2Q5VWT5 728 aa15.2■□□□□ 0.02
TRIM56-201ENST00000306085 MCUR1Q96AQ8 359 aa15.2■□□□□ 0.02
TRIM56-201ENST00000306085 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.2■□□□□ 0.023e-6■■□□□ 14.4
TRIM56-201ENST00000306085 LARP6Q9BRS8 491 aaKnown RBP15.2■□□□□ 0.02
TRIM56-201ENST00000306085 BTBD11A6QL63 1104 aa15.2■□□□□ 0.02
TRIM56-201ENST00000306085 ZNF830Q96NB3 372 aaPredicted RBP15.2■□□□□ 0.02
TRIM56-201ENST00000306085 SMIM24O75264 130 aa15.2■□□□□ 0.02
TRIM56-201ENST00000306085 ZNF165P49910 485 aa15.2■□□□□ 0.02
TRIM56-201ENST00000306085 DDX19AQ9NUU7 478 aaKnown RBP15.2■□□□□ 0.02
TRIM56-201ENST00000306085 CACYBPQ9HB71 228 aaKnown RBP15.2■□□□□ 0.02
TRIM56-201ENST00000306085 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.19■□□□□ 0.02
TRIM56-201ENST00000306085 ANKRD24Q8TF21 1146 aa15.19■□□□□ 0.02
TRIM56-201ENST00000306085 RHOXF2BP0C7M4 288 aa15.19■□□□□ 0.02
TRIM56-201ENST00000306085 MCM5P33992 734 aa15.19■□□□□ 0.02
TRIM56-201ENST00000306085 UBA7P41226 1012 aa15.19■□□□□ 0.02
TRIM56-201ENST00000306085 CCDC62Q6P9F0 684 aa15.19■□□□□ 0.02
TRIM56-201ENST00000306085 RHOXF2Q9BQY4 288 aa15.19■□□□□ 0.02
TRIM56-201ENST00000306085 GDPD2Q9HCC8 539 aa15.19■□□□□ 0.02
TRIM56-201ENST00000306085 NKIRAS1Q9NYS0 192 aa15.19■□□□□ 0.02
TRIM56-201ENST00000306085 TOM1L2Q6ZVM7 507 aa15.19■□□□□ 0.02
TRIM56-201ENST00000306085 ESCO1Q5FWF5 840 aa15.19■□□□□ 0.02
TRIM56-201ENST00000306085 ANKFY1Q9P2R3 1169 aa15.19■□□□□ 0.02
TRIM56-201ENST00000306085 KRBA2Q6ZNG9 492 aa15.19■□□□□ 0.02
TRIM56-201ENST00000306085 FMNL3Q8IVF7 1028 aa15.19■□□□□ 0.02
TRIM56-201ENST00000306085 RBM27Q9P2N5 1060 aaKnown RBP15.19■□□□□ 0.02
TRIM56-201ENST00000306085 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
TRIM56-201ENST00000306085 ATP2B3Q16720 1220 aa15.18■□□□□ 0.02
TRIM56-201ENST00000306085 VTI1AQ96AJ9 217 aa15.18■□□□□ 0.02
TRIM56-201ENST00000306085 ATP6V0A2Q9Y487 856 aa15.18■□□□□ 0.02
TRIM56-201ENST00000306085 BRD4O60885 1362 aaPredicted RBP15.18■□□□□ 0.02
TRIM56-201ENST00000306085 IFIT3O14879 490 aaKnown RBP15.18■□□□□ 0.02
TRIM56-201ENST00000306085 INPP1P49441 399 aa15.18■□□□□ 0.02
TRIM56-201ENST00000306085 ZNF530Q6P9A1 599 aaPredicted RBP15.18■□□□□ 0.02
TRIM56-201ENST00000306085 PDE3AQ14432 1141 aa15.18■□□□□ 0.02
TRIM56-201ENST00000306085 STAT6P42226 847 aa15.18■□□□□ 0.02
TRIM56-201ENST00000306085 MIER3Q7Z3K6 550 aa15.18■□□□□ 0.02
TRIM56-201ENST00000306085 ATF7IPQ6VMQ6 1270 aa15.18■□□□□ 0.02
TRIM56-201ENST00000306085 COG7P83436 770 aa15.18■□□□□ 0.02
TRIM56-201ENST00000306085 CLUL1Q15846 466 aa15.18■□□□□ 0.02
TRIM56-201ENST00000306085 INF2Q27J81 1249 aa15.18■□□□□ 0.02
TRIM56-201ENST00000306085 B4GALNT4Q76KP1 1039 aa15.18■□□□□ 0.02
TRIM56-201ENST00000306085 CETN3O15182 167 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 NUTM2BA6NNL0 878 aaPredicted RBP15.17■□□□□ 0.02
TRIM56-201ENST00000306085 NUTM2EB1AL46 878 aaPredicted RBP15.17■□□□□ 0.02
TRIM56-201ENST00000306085 NUTM2AQ8IVF1 878 aaPredicted RBP15.17■□□□□ 0.02
TRIM56-201ENST00000306085 RAB3IPQ96QF0 476 aaPredicted RBP15.17■□□□□ 0.02
TRIM56-201ENST00000306085 SSFA2P28290 1259 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 KANK3Q6NY19 840 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 ATICP31939 592 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 MTRF1LQ9UGC7 380 aaKnown RBP15.17■□□□□ 0.02
TRIM56-201ENST00000306085 PPP2R5CQ13362 524 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 MRRFQ96E11 262 aaKnown RBP15.17■□□□□ 0.02
TRIM56-201ENST00000306085 FAM212AQ96EL1 285 aa15.17■□□□□ 0.02
TRIM56-201ENST00000306085 FRMD4BQ9Y2L6 1034 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms