RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 OVOS2A0A0J9YW53 1432 aa10.95□□□□□ -0.66
PTPRE-202ENST00000306042 OVOS2Q6IE36 1432 aa10.95□□□□□ -0.66
PTPRE-202ENST00000306042 ZFYP08048 801 aaPredicted RBP10.95□□□□□ -0.66
PTPRE-202ENST00000306042 PLCG2P16885 1265 aa10.95□□□□□ -0.66
PTPRE-202ENST00000306042 TNNI2P48788 182 aa10.95□□□□□ -0.66
PTPRE-202ENST00000306042 SLC4A8Q2Y0W8 1093 aa10.95□□□□□ -0.66
PTPRE-202ENST00000306042 DPY19L2Q6NUT2 758 aa10.95□□□□□ -0.66
PTPRE-202ENST00000306042 GZF1Q9H116 711 aaPredicted RBP10.95□□□□□ -0.66
PTPRE-202ENST00000306042 PREX1Q8TCU6 1659 aa10.95□□□□□ -0.66
PTPRE-202ENST00000306042 PIBF1Q8WXW3 757 aa10.95□□□□□ -0.66
PTPRE-202ENST00000306042 NCOA3Q9Y6Q9 1424 aa10.94□□□□□ -0.66
PTPRE-202ENST00000306042 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.94□□□□□ -0.66
PTPRE-202ENST00000306042 PPIP5K2O43314 1243 aa10.94□□□□□ -0.66
PTPRE-202ENST00000306042 HIBADHP31937 336 aaKnown RBP10.94□□□□□ -0.66
PTPRE-202ENST00000306042 GCKRQ14397 625 aa10.94□□□□□ -0.66
PTPRE-202ENST00000306042 TTLL7Q6ZT98 887 aa10.94□□□□□ -0.66
PTPRE-202ENST00000306042 SEC63Q9UGP8 760 aaKnown RBP10.94□□□□□ -0.66
PTPRE-202ENST00000306042 JAG2Q9Y219 1238 aa10.94□□□□□ -0.66
PTPRE-202ENST00000306042 LAMC1P11047 1609 aa10.94□□□□□ -0.66
PTPRE-202ENST00000306042 RPS8P62241 208 aaKnown RBP10.94□□□□□ -0.66
PTPRE-202ENST00000306042 DNTTIP2Q5QJE6 756 aaKnown RBP10.94□□□□□ -0.66
PTPRE-202ENST00000306042 EYA2O00167 538 aa10.94□□□□□ -0.66
PTPRE-202ENST00000306042 CTCFLQ8NI51 663 aaPredicted RBP10.94□□□□□ -0.66
PTPRE-202ENST00000306042 CPSF1Q10570 1443 aaKnown RBP10.94□□□□□ -0.66
PTPRE-202ENST00000306042 MAP3K15Q6ZN16 1313 aa10.94□□□□□ -0.66
PTPRE-202ENST00000306042 TSPY2A6NKD2 308 aa10.94□□□□□ -0.66
PTPRE-202ENST00000306042 NEXMIFQ5QGS0 1516 aa10.93□□□□□ -0.66
PTPRE-202ENST00000306042 CYP27B1O15528 508 aa10.93□□□□□ -0.66
PTPRE-202ENST00000306042 EN1Q05925 392 aaPredicted RBP10.93□□□□□ -0.66
PTPRE-202ENST00000306042 SLC9C2Q5TAH2 1124 aa10.93□□□□□ -0.66
PTPRE-202ENST00000306042 PRPF40BQ6NWY9 871 aaKnown RBP10.93□□□□□ -0.66
PTPRE-202ENST00000306042 PDRG1Q9NUG6 133 aa10.93□□□□□ -0.66
PTPRE-202ENST00000306042 SERPINB2P05120 415 aa10.93□□□□□ -0.66
PTPRE-202ENST00000306042 ZNF76P36508 570 aa10.93□□□□□ -0.66
PTPRE-202ENST00000306042 TFCP2Q12800 502 aa10.93□□□□□ -0.66
PTPRE-202ENST00000306042 CCDC125Q86Z20 511 aa10.93□□□□□ -0.66
PTPRE-202ENST00000306042 CDK5RAP3Q96JB5 506 aa10.93□□□□□ -0.66
PTPRE-202ENST00000306042 DENND2AQ9ULE3 1009 aa10.93□□□□□ -0.66
PTPRE-202ENST00000306042 R3HCC1Q9Y3T6 440 aaKnown RBP10.93□□□□□ -0.66
PTPRE-202ENST00000306042 NUCB2P80303 420 aa10.93□□□□□ -0.66
PTPRE-202ENST00000306042 PUM3Q15397 648 aaKnown RBP10.93□□□□□ -0.66
PTPRE-202ENST00000306042 TMEM132AQ24JP5 1023 aa10.93□□□□□ -0.66
PTPRE-202ENST00000306042 SOS2Q07890 1332 aaPredicted RBP10.92□□□□□ -0.66
PTPRE-202ENST00000306042 CDK12Q9NYV4 1490 aaPredicted RBP10.92□□□□□ -0.66
PTPRE-202ENST00000306042 TPM2P07951 284 aa10.92□□□□□ -0.66
PTPRE-202ENST00000306042 TSHZ3Q63HK5 1081 aa10.92□□□□□ -0.66
PTPRE-202ENST00000306042 ZNF408Q9H9D4 720 aa10.92□□□□□ -0.66
PTPRE-202ENST00000306042 CCDC196A0A1B0GTZ2 297 aa10.92□□□□□ -0.66
PTPRE-202ENST00000306042 SLC27A3Q5K4L6 730 aa10.92□□□□□ -0.66
PTPRE-202ENST00000306042 CCDC73Q6ZRK6 1079 aa10.92□□□□□ -0.66
PTPRE-202ENST00000306042 SLC4A4Q9Y6R1 1079 aa10.92□□□□□ -0.66
PTPRE-202ENST00000306042 SETBP1Q9Y6X0 1596 aa10.91□□□□□ -0.66
PTPRE-202ENST00000306042 IFIT3O14879 490 aaKnown RBP10.91□□□□□ -0.66
PTPRE-202ENST00000306042 USP31Q70CQ4 1352 aa10.91□□□□□ -0.66
PTPRE-202ENST00000306042 CASTP20810 708 aaKnown RBP10.91□□□□□ -0.66
PTPRE-202ENST00000306042 TXLNAP40222 546 aa10.91□□□□□ -0.66
PTPRE-202ENST00000306042 TXNRD1Q16881 649 aa10.91□□□□□ -0.66
PTPRE-202ENST00000306042 MFSD6Q6ZSS7 791 aa10.91□□□□□ -0.66
PTPRE-202ENST00000306042 WASF1Q92558 559 aa10.91□□□□□ -0.66
PTPRE-202ENST00000306042 MAST3O60307 1309 aa10.91□□□□□ -0.66
PTPRE-202ENST00000306042 ZNF594Q96JF6 807 aaPredicted RBP10.91□□□□□ -0.66
PTPRE-202ENST00000306042 DLC1Q96QB1 1528 aa10.91□□□□□ -0.66
PTPRE-202ENST00000306042 PTPRUQ92729 1446 aa10.91□□□□□ -0.66
PTPRE-202ENST00000306042 MAGEB6P1A0A0J9YX57 407 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 H7C1D1 291 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 HMGB1P09429 215 aaKnown RBP10.9□□□□□ -0.66
PTPRE-202ENST00000306042 GIGYF2Q6Y7W6 1299 aaKnown RBP10.9□□□□□ -0.66
PTPRE-202ENST00000306042 VSIG10Q8N0Z9 540 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 SPATA31A1Q5TZJ5 1347 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 DDX11L8A8MPP1 907 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 NEURL1BA8MQ27 555 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 TAF5LO75529 589 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 MMP10P09238 476 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 PAG1Q9NWQ8 432 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 DDX49Q9Y6V7 483 aaKnown RBP10.9□□□□□ -0.66
PTPRE-202ENST00000306042 DCCP43146 1447 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 RPS6KA4O75676 772 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 CTSWP56202 376 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 EAPPQ56P03 285 aaPredicted RBP10.9□□□□□ -0.66
PTPRE-202ENST00000306042 PPP4R3BQ5MIZ7 849 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 CEP85Q6P2H3 762 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 ZBTB38Q8NAP3 1195 aaPredicted RBP10.9□□□□□ -0.66
PTPRE-202ENST00000306042 STX8Q9UNK0 236 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 CATIPQ7Z7H3 387 aa10.9□□□□□ -0.66
PTPRE-202ENST00000306042 NOL7Q9UMY1 257 aaKnown RBP10.9□□□□□ -0.66
PTPRE-202ENST00000306042 FRMPD1Q5SYB0 1578 aa10.9□□□□□ -0.67
PTPRE-202ENST00000306042 HEG1Q9ULI3 1381 aa10.9□□□□□ -0.67
PTPRE-202ENST00000306042 ZBTB7AO95365 584 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 HOOK2Q96ED9 719 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 ZSCAN31Q96LW9 406 aaPredicted RBP10.89□□□□□ -0.67
PTPRE-202ENST00000306042 SLC12A7Q9Y666 1083 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 TRPM1Q7Z4N2 1603 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 A0A1B0GUL7 405 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 MYCNP04198 464 aaPredicted RBP10.89□□□□□ -0.67
PTPRE-202ENST00000306042 HAND2P61296 217 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 WWC2Q6AWC2 1192 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 WDR66Q8TBY9 1149 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 BECN2A8MW95 431 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 KCNQ2O43526 872 aa10.89□□□□□ -0.67
PTPRE-202ENST00000306042 PCCAP05165 728 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms