RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 FAM161AQ3B820 660 aa33.92■■■■□ 3.02
HDAC3-201ENST00000305264 CHMP3Q9Y3E7 222 aa33.92■■■■□ 3.02
HDAC3-201ENST00000305264 PNMA6EA0A0J9YXQ4 647 aa33.91■■■■□ 3.02
HDAC3-201ENST00000305264 MTX1Q13505 466 aa33.91■■■■□ 3.02
HDAC3-201ENST00000305264 SF3B3Q15393 1217 aaKnown RBP33.91■■■■□ 3.02
HDAC3-201ENST00000305264 GREM2Q9H772 168 aa33.91■■■■□ 3.02
HDAC3-201ENST00000305264 SIRT2Q8IXJ6 389 aa33.91■■■■□ 3.02
HDAC3-201ENST00000305264 KLRG2A4D1S0 409 aaPredicted RBP33.9■■■■□ 3.02
HDAC3-201ENST00000305264 CRY2Q49AN0 593 aa33.9■■■■□ 3.02
HDAC3-201ENST00000305264 TAF1P21675 1872 aa33.9■■■■□ 3.02
HDAC3-201ENST00000305264 COL4A1P02462 1669 aa33.9■■■■□ 3.02
HDAC3-201ENST00000305264 CCDC152Q4G0S7 254 aa33.89■■■■□ 3.02
HDAC3-201ENST00000305264 SRGAP3O43295 1099 aa33.89■■■■□ 3.02
HDAC3-201ENST00000305264 ATP8B2P98198 1209 aa33.89■■■■□ 3.02
HDAC3-201ENST00000305264 PDE6BP35913 854 aa33.88■■■■□ 3.01
HDAC3-201ENST00000305264 KIAA1551Q9HCM1 1747 aa33.88■■■■□ 3.01
HDAC3-201ENST00000305264 RPAP2Q8IXW5 612 aaPredicted RBP33.87■■■■□ 3.01
HDAC3-201ENST00000305264 RTL9Q8NET4 1388 aa33.86■■■■□ 3.01
HDAC3-201ENST00000305264 SEC31BQ9NQW1 1179 aa33.86■■■■□ 3.01
HDAC3-201ENST00000305264 ITGA6P23229 1130 aa33.85■■■■□ 3.01
HDAC3-201ENST00000305264 PPP1R1BQ9UD71 204 aaPredicted RBP33.85■■■■□ 3.01
HDAC3-201ENST00000305264 DLEC1Q9Y238 1755 aa33.84■■■■□ 3.01
HDAC3-201ENST00000305264 KLHL34Q8N239 644 aa33.84■■■■□ 3.01
HDAC3-201ENST00000305264 SPEF2Q9C093 1822 aa33.84■■■■□ 3.01
HDAC3-201ENST00000305264 SRGNP10124 158 aa33.83■■■■□ 3.01
HDAC3-201ENST00000305264 POLA2Q14181 598 aa33.83■■■■□ 3.01
HDAC3-201ENST00000305264 C2CD5Q86YS7 1000 aa33.83■■■■□ 3.01
HDAC3-201ENST00000305264 SSH3Q8TE77 659 aa33.83■■■■□ 3.01
HDAC3-201ENST00000305264 RPGRQ92834 1020 aaKnown RBP33.83■■■■□ 3.01
HDAC3-201ENST00000305264 CHRNA5P30532 468 aa33.83■■■■□ 3.01
HDAC3-201ENST00000305264 RFX5P48382 616 aaPredicted RBP33.83■■■■□ 3.01
HDAC3-201ENST00000305264 ERICH6BQ5W0A0 696 aa33.83■■■■□ 3.01
HDAC3-201ENST00000305264 IFIT5Q13325 482 aaKnown RBP33.82■■■■□ 3
HDAC3-201ENST00000305264 CCDC57Q2TAC2 916 aa33.82■■■■□ 3
HDAC3-201ENST00000305264 KLHDC4Q8TBB5 520 aa33.82■■■■□ 3
HDAC3-201ENST00000305264 CACNA1SQ13698 1873 aa33.8■■■■□ 3
HDAC3-201ENST00000305264 ZNF594Q96JF6 807 aaPredicted RBP33.8■■■■□ 3
HDAC3-201ENST00000305264 LRP5O75197 1615 aa33.8■■■■□ 3
HDAC3-201ENST00000305264 ANKRD18BA2A2Z9 1011 aa33.8■■■■□ 3
HDAC3-201ENST00000305264 DDX46Q7L014 1031 aaKnown RBP33.8■■■■□ 3
HDAC3-201ENST00000305264 PA2G4Q9UQ80 394 aaKnown RBP33.8■■■■□ 3
HDAC3-201ENST00000305264 CD2APQ9Y5K6 639 aa33.8■■■■□ 3
HDAC3-201ENST00000305264 H0YIN7 160 aa33.79■■■■□ 3
HDAC3-201ENST00000305264 HOXA10P31260 410 aaPredicted RBP33.79■■■■□ 3
HDAC3-201ENST00000305264 HMMRO75330 724 aa33.78■■■■□ 3
HDAC3-201ENST00000305264 NPR1P16066 1061 aa33.78■■■■□ 3
HDAC3-201ENST00000305264 CELF1Q92879 486 aaKnown RBP33.78■■■■□ 3
HDAC3-201ENST00000305264 PTPN12Q05209 780 aaKnown RBP33.78■■■■□ 3
HDAC3-201ENST00000305264 MASTLQ96GX5 879 aa33.78■■■■□ 3
HDAC3-201ENST00000305264 RBM17Q96I25 401 aaKnown RBP33.78■■■■□ 3
HDAC3-201ENST00000305264 GOLGB1Q14789 3259 aaKnown RBP33.77■■■■□ 3
HDAC3-201ENST00000305264 A0A0G2JLW4 131 aa33.76■■■■□ 3
HDAC3-201ENST00000305264 DPEP1P16444 411 aa33.76■■■■□ 3
HDAC3-201ENST00000305264 PDZRN3Q9UPQ7 1066 aa33.76■■■■□ 3
HDAC3-201ENST00000305264 HDAC1Q13547 482 aaPredicted RBP33.76■■■□□ 2.99
HDAC3-201ENST00000305264 TGFB2P61812 414 aa33.75■■■□□ 2.99
HDAC3-201ENST00000305264 TAF7LQ5H9L4 462 aa33.75■■■□□ 2.99
HDAC3-201ENST00000305264 ZNF622Q969S3 477 aaKnown RBP eCLIP33.75■■■□□ 2.99
HDAC3-201ENST00000305264 CDC5LQ99459 802 aaKnown RBP33.75■■■□□ 2.99
HDAC3-201ENST00000305264 IGHDP01880 384 aa33.74■■■□□ 2.99
HDAC3-201ENST00000305264 GRAPQ13588 217 aa33.74■■■□□ 2.99
HDAC3-201ENST00000305264 GRAPLQ8TC17 118 aaPredicted RBP33.74■■■□□ 2.99
HDAC3-201ENST00000305264 COPRSQ9NQ92 184 aa33.74■■■□□ 2.99
HDAC3-201ENST00000305264 CRAMP1Q96RY5 1269 aa33.74■■■□□ 2.99
HDAC3-201ENST00000305264 FHDC1Q9C0D6 1143 aaPredicted RBP33.74■■■□□ 2.99
HDAC3-201ENST00000305264 SIL1Q9H173 461 aa33.74■■■□□ 2.99
HDAC3-201ENST00000305264 BRCA1P38398 1863 aaKnown RBP33.74■■■□□ 2.99
HDAC3-201ENST00000305264 KCNA3P22001 575 aa33.73■■■□□ 2.99
HDAC3-201ENST00000305264 STYK1Q6J9G0 422 aa33.73■■■□□ 2.99
HDAC3-201ENST00000305264 GTF3C3Q9Y5Q9 886 aa33.73■■■□□ 2.99
HDAC3-201ENST00000305264 ANKRD18AQ8IVF6 992 aa33.72■■■□□ 2.99
HDAC3-201ENST00000305264 NLGN2Q8NFZ4 835 aa33.72■■■□□ 2.99
HDAC3-201ENST00000305264 PPP4R2Q9NY27 417 aa33.72■■■□□ 2.99
HDAC3-201ENST00000305264 PUS3Q9BZE2 481 aaKnown RBP33.71■■■□□ 2.99
HDAC3-201ENST00000305264 RWDD1Q9H446 243 aaPredicted RBP33.71■■■□□ 2.99
HDAC3-201ENST00000305264 RPS8P62241 208 aaKnown RBP33.71■■■□□ 2.99
HDAC3-201ENST00000305264 SLC51AQ86UW1 340 aa33.71■■■□□ 2.99
HDAC3-201ENST00000305264 EXOC6BQ9Y2D4 811 aa33.71■■■□□ 2.99
HDAC3-201ENST00000305264 SLX4Q8IY92 1834 aa33.7■■■□□ 2.99
HDAC3-201ENST00000305264 SURF6O75683 361 aaKnown RBP33.7■■■□□ 2.99
HDAC3-201ENST00000305264 IGHMBP2P38935 993 aaKnown RBP33.7■■■□□ 2.99
HDAC3-201ENST00000305264 LRRC24Q50LG9 513 aa33.69■■■□□ 2.98
HDAC3-201ENST00000305264 B4GALNT3Q6L9W6 998 aa33.69■■■□□ 2.98
HDAC3-201ENST00000305264 LDHAL6AQ6ZMR3 332 aa33.69■■■□□ 2.98
HDAC3-201ENST00000305264 CCDC136Q96JN2 1154 aa33.69■■■□□ 2.98
HDAC3-201ENST00000305264 MPHOSPH8Q99549 860 aa33.69■■■□□ 2.98
HDAC3-201ENST00000305264 ALDH1B1P30837 517 aa33.68■■■□□ 2.98
HDAC3-201ENST00000305264 NOP58Q9Y2X3 529 aaKnown RBP33.68■■■□□ 2.98
HDAC3-201ENST00000305264 EYA2O00167 538 aa33.67■■■□□ 2.98
HDAC3-201ENST00000305264 DCTPP1Q9H773 170 aa33.67■■■□□ 2.98
HDAC3-201ENST00000305264 A0A1B0GUL6 1792 aa33.67■■■□□ 2.98
HDAC3-201ENST00000305264 PRPF40BQ6NWY9 871 aaKnown RBP33.66■■■□□ 2.98
HDAC3-201ENST00000305264 ATG9AQ7Z3C6 839 aa33.66■■■□□ 2.98
HDAC3-201ENST00000305264 CNKSR1Q969H4 720 aa33.66■■■□□ 2.98
HDAC3-201ENST00000305264 CNNM1Q9NRU3 951 aa33.66■■■□□ 2.98
HDAC3-201ENST00000305264 LRRC37AA6NMS7 1700 aa33.66■■■□□ 2.98
HDAC3-201ENST00000305264 BSDC1Q9NW68 430 aaPredicted RBP33.65■■■□□ 2.98
HDAC3-201ENST00000305264 WWC3Q9ULE0 1092 aa33.65■■■□□ 2.98
HDAC3-201ENST00000305264 PPEF1O14829 653 aaPredicted RBP33.65■■■□□ 2.98
HDAC3-201ENST00000305264 BBOX1O75936 387 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms