RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 BICD2Q8TD16 824 aa15.25■□□□□ 0.03
VAT1L-201ENST00000302536 ECHDC1Q9NTX5 307 aa15.25■□□□□ 0.03
VAT1L-201ENST00000302536 ADCY5O95622 1261 aa15.24■□□□□ 0.03
VAT1L-201ENST00000302536 KAZALD1Q96I82 304 aa15.24■□□□□ 0.03
VAT1L-201ENST00000302536 KDM4AO75164 1064 aa15.24■□□□□ 0.03
VAT1L-201ENST00000302536 NOLC1Q14978 699 aaKnown RBP eCLIP15.24■□□□□ 0.03
VAT1L-201ENST00000302536 PCDH11XQ9BZA7 1347 aa15.24■□□□□ 0.03
VAT1L-201ENST00000302536 PCDH11YQ9BZA8 1340 aa15.24■□□□□ 0.03
VAT1L-201ENST00000302536 SASH1O94885 1247 aa15.24■□□□□ 0.03
VAT1L-201ENST00000302536 GIMAP6Q6P9H5 292 aa15.24■□□□□ 0.03
VAT1L-201ENST00000302536 FILIP1Q7Z7B0 1213 aa15.24■□□□□ 0.03
VAT1L-201ENST00000302536 LETM1O95202 739 aaPredicted RBP15.23■□□□□ 0.03
VAT1L-201ENST00000302536 HSP90AB3PQ58FF7 597 aa15.23■□□□□ 0.03
VAT1L-201ENST00000302536 FAM177A1Q8N128 213 aaPredicted RBP15.23■□□□□ 0.03
VAT1L-201ENST00000302536 SMC3Q9UQE7 1217 aa15.23■□□□□ 0.03
VAT1L-201ENST00000302536 RGPD1P0DJD0 1748 aa15.23■□□□□ 0.03
VAT1L-201ENST00000302536 EXOC5O00471 708 aa15.23■□□□□ 0.03
VAT1L-201ENST00000302536 TERF1P54274 439 aa15.23■□□□□ 0.03
VAT1L-201ENST00000302536 CKAP2LQ8IYA6 745 aa15.23■□□□□ 0.03
VAT1L-201ENST00000302536 BECN2A8MW95 431 aa15.22■□□□□ 0.03
VAT1L-201ENST00000302536 GLRX3O76003 335 aaKnown RBP15.22■□□□□ 0.03
VAT1L-201ENST00000302536 GTPBP4Q9BZE4 634 aaKnown RBP15.22■□□□□ 0.03
VAT1L-201ENST00000302536 TRMT1Q9NXH9 659 aaKnown RBP15.22■□□□□ 0.03
VAT1L-201ENST00000302536 TMEM63CQ9P1W3 806 aa15.22■□□□□ 0.03
VAT1L-201ENST00000302536 POLA2Q14181 598 aa15.22■□□□□ 0.03
VAT1L-201ENST00000302536 CCDC129Q6ZRS4 1044 aa15.22■□□□□ 0.03
VAT1L-201ENST00000302536 DBNDD2Q9BQY9 259 aa15.22■□□□□ 0.03
VAT1L-201ENST00000302536 LMTK3Q96Q04 1460 aa15.22■□□□□ 0.03
VAT1L-201ENST00000302536 STK3Q13188 491 aa15.22■□□□□ 0.03
VAT1L-201ENST00000302536 PIGBQ92521 554 aa15.22■□□□□ 0.03
VAT1L-201ENST00000302536 CASTP20810 708 aaKnown RBP15.21■□□□□ 0.03
VAT1L-201ENST00000302536 FKBP4Q02790 459 aaKnown RBP eCLIP15.21■□□□□ 0.03
VAT1L-201ENST00000302536 MYRIPQ8NFW9 859 aa15.21■□□□□ 0.03
VAT1L-201ENST00000302536 NSFL1CQ9UNZ2 370 aaKnown RBP15.21■□□□□ 0.03
VAT1L-201ENST00000302536 MBD3O95983 291 aa15.21■□□□□ 0.03
VAT1L-201ENST00000302536 PI4K2BQ8TCG2 481 aa15.21■□□□□ 0.03
VAT1L-201ENST00000302536 JAKMIP1Q96N16 626 aaKnown RBP15.21■□□□□ 0.03
VAT1L-201ENST00000302536 BCL2L12Q9HB09 334 aa15.21■□□□□ 0.03
VAT1L-201ENST00000302536 HDAC5Q9UQL6 1122 aa15.21■□□□□ 0.03
VAT1L-201ENST00000302536 GOLGA6L19H0YKK7 550 aa15.21■□□□□ 0.02
VAT1L-201ENST00000302536 PTH1RQ03431 593 aa15.21■□□□□ 0.02
VAT1L-201ENST00000302536 BICDL1Q6ZP65 573 aa15.21■□□□□ 0.02
VAT1L-201ENST00000302536 CREBRFQ8IUR6 639 aa15.21■□□□□ 0.02
VAT1L-201ENST00000302536 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.21■□□□□ 0.02
VAT1L-201ENST00000302536 KIF20AO95235 890 aa15.2■□□□□ 0.02
VAT1L-201ENST00000302536 HOMER1Q86YM7 354 aa15.2■□□□□ 0.02
VAT1L-201ENST00000302536 PUS3Q9BZE2 481 aaKnown RBP15.2■□□□□ 0.02
VAT1L-201ENST00000302536 MED1Q15648 1581 aaPredicted RBP15.2■□□□□ 0.02
VAT1L-201ENST00000302536 TMX3Q96JJ7 454 aa15.2■□□□□ 0.02
VAT1L-201ENST00000302536 CWC25Q9NXE8 425 aaPredicted RBP15.2■□□□□ 0.02
VAT1L-201ENST00000302536 LRRC24Q50LG9 513 aa15.2■□□□□ 0.02
VAT1L-201ENST00000302536 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
VAT1L-201ENST00000302536 SEC62Q99442 399 aaKnown RBP15.2■□□□□ 0.02
VAT1L-201ENST00000302536 LMBRD1Q9NUN5 540 aa15.2■□□□□ 0.02
VAT1L-201ENST00000302536 NMIQ13287 307 aaPredicted RBP15.19■□□□□ 0.02
VAT1L-201ENST00000302536 LRSAM1Q6UWE0 723 aa15.19■□□□□ 0.02
VAT1L-201ENST00000302536 HELBQ8NG08 1087 aaPredicted RBP15.19■□□□□ 0.02
VAT1L-201ENST00000302536 KIF6Q6ZMV9 814 aa15.19■□□□□ 0.02
VAT1L-201ENST00000302536 ERC1Q8IUD2 1116 aa15.19■□□□□ 0.02
VAT1L-201ENST00000302536 SNX21Q969T3 373 aa15.19■□□□□ 0.02
VAT1L-201ENST00000302536 C8orf37Q96NL8 207 aa15.19■□□□□ 0.02
VAT1L-201ENST00000302536 CARD10Q9BWT7 1032 aa15.19■□□□□ 0.02
VAT1L-201ENST00000302536 RGPD5Q99666 1765 aa15.19■□□□□ 0.02
VAT1L-201ENST00000302536 GOLIM4O00461 696 aa15.19■□□□□ 0.02
VAT1L-201ENST00000302536 UTP14CQ5TAP6 766 aaKnown RBP15.19■□□□□ 0.02
VAT1L-201ENST00000302536 GPT2Q8TD30 523 aa15.19■□□□□ 0.02
VAT1L-201ENST00000302536 STK11IPQ8N1F8 1099 aa15.18■□□□□ 0.02
VAT1L-201ENST00000302536 LRRC2Q9BYS8 371 aa15.18■□□□□ 0.02
VAT1L-201ENST00000302536 HS1BP3Q53T59 392 aa15.18■□□□□ 0.02
VAT1L-201ENST00000302536 PLBD2Q8NHP8 589 aa15.18■□□□□ 0.02
VAT1L-201ENST00000302536 OSBPL3Q9H4L5 887 aa15.18■□□□□ 0.02
VAT1L-201ENST00000302536 ZNF445P59923 1031 aa15.17■□□□□ 0.02
VAT1L-201ENST00000302536 CCDC57Q2TAC2 916 aa15.17■□□□□ 0.02
VAT1L-201ENST00000302536 CCDC24Q8N4L8 307 aa15.17■□□□□ 0.02
VAT1L-201ENST00000302536 NECAB1Q8N987 351 aa15.17■□□□□ 0.02
VAT1L-201ENST00000302536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.17■□□□□ 0.02
VAT1L-201ENST00000302536 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
VAT1L-201ENST00000302536 POLR3GO15318 223 aaPredicted RBP15.17■□□□□ 0.02
VAT1L-201ENST00000302536 TMX1Q9H3N1 280 aa15.17■□□□□ 0.02
VAT1L-201ENST00000302536 CCDC112Q8NEF3 446 aa15.16■□□□□ 0.02
VAT1L-201ENST00000302536 RUFY2Q8WXA3 655 aa15.16■□□□□ 0.02
VAT1L-201ENST00000302536 RIOK3O14730 519 aaKnown RBP15.16■□□□□ 0.02
VAT1L-201ENST00000302536 HLFQ16534 295 aa15.16■□□□□ 0.02
VAT1L-201ENST00000302536 CCDC83Q8IWF9 413 aa15.16■□□□□ 0.02
VAT1L-201ENST00000302536 ZBTB1Q9Y2K1 713 aa15.16■□□□□ 0.02
VAT1L-201ENST00000302536 A0A0D9SFI3 127 aa15.16■□□□□ 0.02
VAT1L-201ENST00000302536 SNAP23O00161 211 aa15.16■□□□□ 0.02
VAT1L-201ENST00000302536 STARD3NLO95772 234 aa15.16■□□□□ 0.02
VAT1L-201ENST00000302536 ADCK5Q3MIX3 580 aa15.16■□□□□ 0.02
VAT1L-201ENST00000302536 TFIP11Q9UBB9 837 aaKnown RBP15.16■□□□□ 0.02
VAT1L-201ENST00000302536 TRMT112Q9UI30 125 aaKnown RBP15.16■□□□□ 0.02
VAT1L-201ENST00000302536 DBNLQ9UJU6 430 aaKnown RBP15.16■□□□□ 0.02
VAT1L-201ENST00000302536 WASHC4Q2M389 1173 aa15.15■□□□□ 0.02
VAT1L-201ENST00000302536 ZNF710Q8N1W2 664 aa15.15■□□□□ 0.02
VAT1L-201ENST00000302536 NGLY1Q96IV0 654 aa15.15■□□□□ 0.02
VAT1L-201ENST00000302536 STAP2Q9UGK3 403 aa15.15■□□□□ 0.02
VAT1L-201ENST00000302536 SGSM2O43147 1006 aa15.15■□□□□ 0.02
VAT1L-201ENST00000302536 GADD45BO75293 160 aaPredicted RBP15.15■□□□□ 0.02
VAT1L-201ENST00000302536 MCM5P33992 734 aa15.15■□□□□ 0.02
VAT1L-201ENST00000302536 PTPN12Q05209 780 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms