RNA–Protein interactions for RNA: ENST00000300056.7

PEX11A-201, Transcript of peroxisomal biogenesis factor 11 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX11A, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11A-201ENST00000300056 IQCB1Q15051 598 aa12.46□□□□□ -0.41
PEX11A-201ENST00000300056 CWF19L2Q2TBE0 894 aaKnown RBP12.46□□□□□ -0.41
PEX11A-201ENST00000300056 CGNQ9P2M7 1197 aaKnown RBP12.46□□□□□ -0.41
PEX11A-201ENST00000300056 DDX41Q9UJV9 622 aaKnown RBP12.46□□□□□ -0.41
PEX11A-201ENST00000300056 USP27XA6NNY8 438 aa12.46□□□□□ -0.42
PEX11A-201ENST00000300056 GIGYF1O75420 1035 aaPredicted RBP12.46□□□□□ -0.42
PEX11A-201ENST00000300056 PROSER3Q2NL68 480 aa12.46□□□□□ -0.42
PEX11A-201ENST00000300056 C11orf57Q6ZUT1 292 aaPredicted RBP12.46□□□□□ -0.42
PEX11A-201ENST00000300056 BRF1Q92994 677 aa12.46□□□□□ -0.42
PEX11A-201ENST00000300056 FSD1Q9BTV5 496 aa12.46□□□□□ -0.42
PEX11A-201ENST00000300056 BCL11BQ9C0K0 894 aaPredicted RBP12.46□□□□□ -0.42
PEX11A-201ENST00000300056 CEP135Q66GS9 1140 aa12.45□□□□□ -0.42
PEX11A-201ENST00000300056 SARM1Q6SZW1 724 aa12.45□□□□□ -0.42
PEX11A-201ENST00000300056 LRRC8AQ8IWT6 810 aa12.45□□□□□ -0.42
PEX11A-201ENST00000300056 GTF3C6Q969F1 213 aa12.45□□□□□ -0.42
PEX11A-201ENST00000300056 KAZALD1Q96I82 304 aa12.45□□□□□ -0.42
PEX11A-201ENST00000300056 BOLA2Q9H3K6 86 aa12.45□□□□□ -0.42
PEX11A-201ENST00000300056 AMOTL2Q9Y2J4 779 aa12.45□□□□□ -0.42
PEX11A-201ENST00000300056 DDX11Q96FC9 970 aa12.45□□□□□ -0.42
PEX11A-201ENST00000300056 CAVIN2O95810 425 aa12.44□□□□□ -0.42
PEX11A-201ENST00000300056 TSGA10IPQ3SY00 556 aa12.44□□□□□ -0.42
PEX11A-201ENST00000300056 ZNF592Q92610 1267 aa12.44□□□□□ -0.42
PEX11A-201ENST00000300056 SUCLG2Q96I99 432 aa12.44□□□□□ -0.42
PEX11A-201ENST00000300056 HMG20BQ9P0W2 317 aa12.44□□□□□ -0.42
PEX11A-201ENST00000300056 DBF4Q9UBU7 674 aaPredicted RBP12.44□□□□□ -0.42
PEX11A-201ENST00000300056 USP54Q70EL1 1684 aa12.44□□□□□ -0.42
PEX11A-201ENST00000300056 RBM6P78332 1123 aaKnown RBP12.44□□□□□ -0.42
PEX11A-201ENST00000300056 KIF18AQ8NI77 898 aa12.44□□□□□ -0.42
PEX11A-201ENST00000300056 MRFAP1L1Q96HT8 127 aa12.44□□□□□ -0.42
PEX11A-201ENST00000300056 CHMP4AQ9BY43 222 aa12.44□□□□□ -0.42
PEX11A-201ENST00000300056 COL15A1P39059 1388 aa12.43□□□□□ -0.42
PEX11A-201ENST00000300056 KSR2Q6VAB6 950 aa12.43□□□□□ -0.42
PEX11A-201ENST00000300056 NYAP1Q6ZVC0 841 aa12.43□□□□□ -0.42
PEX11A-201ENST00000300056 BICC1Q9H694 974 aaKnown RBP12.43□□□□□ -0.42
PEX11A-201ENST00000300056 BTBD11A6QL63 1104 aa12.43□□□□□ -0.42
PEX11A-201ENST00000300056 GOLGA6L19H0YKK7 550 aa12.43□□□□□ -0.42
PEX11A-201ENST00000300056 TAF5LO75529 589 aa12.43□□□□□ -0.42
PEX11A-201ENST00000300056 GABPB1Q06547 395 aaPredicted RBP12.43□□□□□ -0.42
PEX11A-201ENST00000300056 EDC3Q96F86 508 aaKnown RBP12.43□□□□□ -0.42
PEX11A-201ENST00000300056 ZNF215Q9UL58 517 aaPredicted RBP12.43□□□□□ -0.42
PEX11A-201ENST00000300056 MORC2Q9Y6X9 1032 aaPredicted RBP12.43□□□□□ -0.42
PEX11A-201ENST00000300056 GRM8O00222 908 aa12.42□□□□□ -0.42
PEX11A-201ENST00000300056 G3BP1Q13283 466 aaKnown RBP eCLIP12.42□□□□□ -0.42
PEX11A-201ENST00000300056 NBPF6Q5VWK0 638 aa12.42□□□□□ -0.42
PEX11A-201ENST00000300056 USPL1Q5W0Q7 1092 aa12.42□□□□□ -0.42
PEX11A-201ENST00000300056 PLPPR3Q6T4P5 718 aa12.42□□□□□ -0.42
PEX11A-201ENST00000300056 ABTB2Q8N961 1025 aa12.42□□□□□ -0.42
PEX11A-201ENST00000300056 NBPF4Q96M43 638 aa12.42□□□□□ -0.42
PEX11A-201ENST00000300056 SLIT1O75093 1534 aa12.42□□□□□ -0.42
PEX11A-201ENST00000300056 ADD1P35611 737 aaKnown RBP12.42□□□□□ -0.42
PEX11A-201ENST00000300056 CCZ1BP86790 482 aa12.42□□□□□ -0.42
PEX11A-201ENST00000300056 CCZ1P86791 482 aaPredicted RBP12.42□□□□□ -0.42
PEX11A-201ENST00000300056 CEBPZQ03701 1054 aaKnown RBP12.42□□□□□ -0.42
PEX11A-201ENST00000300056 TEFQ10587 303 aa12.42□□□□□ -0.42
PEX11A-201ENST00000300056 STX1AQ16623 288 aa12.42□□□□□ -0.42
PEX11A-201ENST00000300056 SIL1Q9H173 461 aa12.42□□□□□ -0.42
PEX11A-201ENST00000300056 USP16Q9Y5T5 823 aa12.42□□□□□ -0.42
PEX11A-201ENST00000300056 A0A087WWV3 80 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 NEMFO60524 1076 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 SKILP12757 684 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 KMT5BQ4FZB7 885 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 ZNF771Q7L3S4 317 aaPredicted RBP12.41□□□□□ -0.42
PEX11A-201ENST00000300056 FTOQ9C0B1 505 aaKnown RBP eCLIP12.41□□□□□ -0.42
PEX11A-201ENST00000300056 GOLPH3LQ9H4A5 285 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 ERBB3P21860 1342 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 CCDC69A6NI79 296 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 H3BQV1 296 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 UTYO14607 1347 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 PTPN14Q15678 1187 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 IFFO2Q5TF58 517 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 CYB5RLQ6IPT4 315 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 MPRIPQ6WCQ1 1025 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 KLHDC4Q8TBB5 520 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 LMO7Q8WWI1 1683 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 ZSCAN16Q9H4T2 348 aaPredicted RBP12.41□□□□□ -0.42
PEX11A-201ENST00000300056 CFAP45Q9UL16 551 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 HDAC5Q9UQL6 1122 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 LTN1O94822 1766 aa12.41□□□□□ -0.42
PEX11A-201ENST00000300056 MRC1P22897 1456 aa12.4□□□□□ -0.42
PEX11A-201ENST00000300056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.4□□□□□ -0.42
PEX11A-201ENST00000300056 PRAMEF22A3QJZ6 481 aa12.4□□□□□ -0.42
PEX11A-201ENST00000300056 SLFN14P0C7P3 912 aa12.4□□□□□ -0.42
PEX11A-201ENST00000300056 KRT32Q14532 448 aa12.4□□□□□ -0.42
PEX11A-201ENST00000300056 Q6ZUG5 572 aa12.4□□□□□ -0.42
PEX11A-201ENST00000300056 DHX40Q8IX18 779 aaKnown RBP12.4□□□□□ -0.42
PEX11A-201ENST00000300056 ZNF397Q8NF99 534 aaPredicted RBP12.4□□□□□ -0.42
PEX11A-201ENST00000300056 LINS1Q8NG48 757 aa12.4□□□□□ -0.42
PEX11A-201ENST00000300056 NEK1Q96PY6 1258 aa12.4□□□□□ -0.42
PEX11A-201ENST00000300056 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.4□□□□□ -0.42
PEX11A-201ENST00000300056 V9GYY5 206 aaPredicted RBP12.4□□□□□ -0.42
PEX11A-201ENST00000300056 ZNF530Q6P9A1 599 aaPredicted RBP12.4□□□□□ -0.42
PEX11A-201ENST00000300056 FILIP1Q7Z7B0 1213 aa12.4□□□□□ -0.42
PEX11A-201ENST00000300056 CCAR1Q8IX12 1150 aaKnown RBP12.4□□□□□ -0.42
PEX11A-201ENST00000300056 ANKARQ7Z5J8 1434 aa12.4□□□□□ -0.43
PEX11A-201ENST00000300056 CTAGE5O15320 804 aa12.39□□□□□ -0.43
PEX11A-201ENST00000300056 HSP90B1P14625 803 aaKnown RBP12.39□□□□□ -0.43
PEX11A-201ENST00000300056 SCRN1Q12765 414 aa12.39□□□□□ -0.43
PEX11A-201ENST00000300056 SNW1Q13573 536 aaKnown RBP12.39□□□□□ -0.43
PEX11A-201ENST00000300056 SMARCC2Q8TAQ2 1214 aa12.39□□□□□ -0.43
PEX11A-201ENST00000300056 CHGBP05060 677 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms